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Publications of J.-F. Mangin

Articles in journal or book chapters

  1. A. Cachia, G. Borsta, C. Tissiera, C. Fischer, M. Plaze, O. Gay, D. Rivière, N. Gogtay, J. Giedd, J.-F. Mangin, O. Houdé, and A. Raznahang. Longitudinal stability of the folding pattern of the anterior cingulate cortex during development. Developmental Cognitive Neuroscience, 19:122-127, June 2016. [bibtex-entry]


  2. S. Lefranc, P. Roca, M. Perrot, C. Poupon, D. Le Bihan, J.-F. Mangin, and D. Rivière. Groupwise connectivity-based parcellation of the whole human cortical surface using watershed-driven dimension reduction. Medical Image Analysis, 30:11-29, 2016. Keyword(s): brainvisa, lnao. [bibtex-entry]


  3. G. Operto, M. Chupin, B. Batrancourt, M.O. Habert, O. Colliot, H. Benali, C. Poupon, C. Champseix, C. Delmaire, S. Marie, D. Rivière, M. Pelegrini-Issac, V. Perlbarg, R. Trebossen, M. Bottlaender, V. Frouin, A. Grigis, D. Papadopoulos Orfanos, H. Dary, L. Fillon, C. Azouani, A. Bouyahia, C. Fischer, L. Edward, M. Bouin, U. Thoprakarn, J. Li, L. Makkaoui, S. Poret, C. Dufouil, V. Bouteloup, G. Chételat, B. Dubois, S. Lehéricy, J.-F. Mangin, and Y. Cointepas. CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts. Neuroinformatics, 2016. [bibtex-entry]


  4. J.-F. Mangin, G. Auzias, O. Coulon, Z. Y. Sun, D. Rivière, and J. Régis. Sulci as landmarks. Brain mapping: an encyclopedic reference, 2:45-52, 2015. [bibtex-entry]


  5. J.-F. Mangin, M. Perrot, G. Operto, A. Cachia, C. Fischer, J. Lefèvre, D. Rivière, and CEA Neurospin. Sulcus identification and labelling. Brain mapping: an encyclopedic reference, 1:365-371, 2015. [bibtex-entry]


  6. P. Roca, C. Mellerio, F. Chassoux, D. Rivière, A. Cachia, S. Charron, S. Lion, J.-F. Mangin, B. Devaux, J.-F. Meder, and others. Sulcus-Based MR Analysis of Focal Cortical Dysplasia Located in the Central Region. PloS one, 10(3):e0122252, 2015. [bibtex-entry]


  7. F. De Guio, J.-F. Mangin, D. Rivière, M. Perrot, C. D. Molteno, S. W. Jacobson, E. M. Meintjes, and J. L. Jacobson. A study of cortical morphology in children with fetal alcohol spectrum disorders. Hum. Brain Mapp., 35(5):2285-2296, 2014. Keyword(s): brainvisa, Sulci. [bibtex-entry]


  8. J. Dubois, G. Dehaene-Lambertz, J.-F. Mangin, D. Le Bihan, P. S. Hüppi, and L. Hertz-Pannier. Brain development of infant and MRI by diffusion tensor imaging. Neurophysiol Clin., 42(1):1-9, 2012. [bibtex-entry]


  9. M. Fouquet, B. Desgranges, R La Joie, D. Rivière, J.-F. Mangin, B. Landeau, F. Mézenge, A. Pélerin, V. de la Sayette, F. Viader, J. C. Baron, F. Eustache, and G. Chételat. Role of hippocampal CA1 atrophy in memory encoding deficits in amnestic Mild Cofbitive Impairment. Neuroimage, 59(4):3309-15, 2012. [bibtex-entry]


  10. P. Guevara, D. Duclap, C. Poupon, L. Marrakchi-Kacem, P. Fillard, D. Le Bihan, M. Leboyer, J. Houenou, and J.-F. Mangin. Automatic fiber bundle segmentation in massive tractography datasets using a multi-subject bundle atlas. Neuroimage, 2012. [bibtex-entry]


  11. E. Jouvent, J.-F. Mangin, E. Duchesnay, R. Porcher, M. Düring, Y. Mewald, J. P. Guichard, D. Hervé, S. Reyes, N. Zieren, M. Dichgans, and H. Chabriat. Longitudinal changes of cortical morphology in CADASIL. Neurobiol Aging, 33(5):1002.e29-36, 2012. [bibtex-entry]


  12. E. Jouvent, J.-F. Mangin, D. Hervé, M. Düring, M. Dichgans, and H. Chabriat. Cortical folding influences migraine aura symptoms in CADASIL. J Neurol Neurosurg Psychiatry, 83(2):213-6, 2012. [bibtex-entry]


  13. P. Kochunov, W. Rogers, J.-F. Mangin, and J. L. Lancaster. A Library of Cortical Morphology Analysis Tools to Study Development, Aging and Genetics of Cerebral Cortex. Neuroinformatics, 10(1):81-96, 2012. Keyword(s): brainvisa. [bibtex-entry]


  14. G. Operto, D. Rivière, B. Fertil, R. Bulot, J.-F. Mangin, and O. Coulon. Structural Analysis of fMRI data: a surface-based framework for multi-subject studies. Medical Image Analysis, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  15. P. Reiner, E. Jouvent, E. Duchesnay, R. Cuingnet, J.-F. Mangin, and H. Chabriat. Sulcal Span in Alzheimer's Disease, Amnestic Mild Cognitive Impairment, and Healthy Controls. J Alzheimers Dis., 2012. [bibtex-entry]


  16. Z. Y. Sun, S. Klöppel, D. Rivière, M. Perrot, R. Frackowiak, H. Siebner, and J.-F. Mangin. The effect of handedness on the shape of the central sulcus. Neuroimage, 60(1):332-9, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  17. G. Auzias, O. Colliot, J. A. Glaunès, M. Perrot, J.-F. Mangin, A. Trouvé, and S. Baillet. Diffeomorphic Brain Registration Under Exhaustive Sulcal Constraints. IEEE Trans Med Imaging, 30(6):1214-1227, 2011. [bibtex-entry]


  18. P. Fillard, M. Descoteaux, A. Goh, S. Gouttard, B. Jeurissen, J. Malcolm, A. Ramirez-Manzanares, M. Reisert, K. Sakaie, F. Tensaouti, T. Yo, J.-F. Mangin, and C. Poupon. Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom. Neuroimage, 56(1):220-34, 2011. [bibtex-entry]


  19. H. Glasel, F. Leroy, J. Dubois, L. Hertz-Pannier, J.-F. Mangin, and G. Dehaene-Lambertz. A robust cerebral asymmetry in the infant brain: The rightward superior temporal sulcus. Neuroimage, 2011. [bibtex-entry]


  20. E. Jouvent, C. Poupon, F. Gray, C. Paquet, J.-F. Mangin, D Le Bihan, and H. Chabriat. Intracortical infarcts in small vessel disease: a combined 7-T postmortem MRI and neuropathological case study in cerebral autosomal-dominant arteriopathy with subcortical infarcts and leukoencephalopathy. Stroke, 42(3):27-30, 2011. [bibtex-entry]


  21. E. Jouvent, S. Reyes S, J.-F. Mangin, P. Roca, M. Perrot, B. Thyreau, D. Hervé, M. Dichgans, and H. Chabriat. Apathy is related to cortex morphology in CADASIL: A sulcal-based morphometry study. Neurology, 76(17):1472-7, 2011. [bibtex-entry]


  22. F. Leroy, H. Glasel, J. Dubois, L. Hertz-Pannier, B. Thirion, J.-F. Mangin, and G. Dehaene-Lambertz. Early maturation of the linguistic dorsal pathway in human infants. J Neurosci, 31(4):1500-6, 2011. [bibtex-entry]


  23. F. Leroy, J.-F. Mangin, F. Rousseau, H. Glasel, L. Hertz-Pannier, J. Dubois, and G. Dehaene-Lambertz. Atlas-free surface reconstruction of the cortical grey-white interface in infants. PLoS One, 6(11):e27128, 2011. Keyword(s): brainvisa, lnao. [bibtex-entry]


  24. M. Perrot, D. Rivière, and J.-F. Mangin. Cortical sulci recognition and spatial normalization. Medical Image Analysis, 15(4):529-550, 2011. Keyword(s): sulci, SPAM, brainvisa. [bibtex-entry]


  25. J. Régis, M. Tamura, M. Park, A. McGonigal, D. Rivière, O. Coulon, F. Bartolomei, N. Girard, D. Figarella-Branger, P. Chauvel, and J.-F. Mangin. Subclinical abnormal gyration pattern, a potential anatomic marker of epileptogenic zone in patients with MRI–negative frontal lobe epilepsy. Neurosurgery, 69(1):80-94, 2011. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  26. A. Sarrazin, B. Etain, F. E. Vederine, M. A d'Albis, N. Hamdani, C. Daban, M. Delavest, J. P. Lépine, M. Leboyer, J.-F. Mangin, C. Poupon, and J. Houenou. MRI exploration of pineal volume in bipolar disorder. J Affect Disord., 135(1-3):377-9, 2011. [bibtex-entry]


  27. C. Clouchoux, D. Rivière, J.-F. Mangin, G. Operto, J. Régis, and O. Coulon. Model-driven parameterization of the cortical surface for localization and inter-subject matching. Neuroimage, 50(2):552-66, 2010. [bibtex-entry]


  28. S. Klöppel, J.-F. Mangin, A. Vongerichten, R. Frackowiak, and H. R. Siebner. Nurture versus nature: long-term impact of forced right-handedness on structure of pericentral cortex and basal ganglia. J Neurosci., 30(9):3271-5, 2010. [bibtex-entry]


  29. P. Kochunov, D. C. Glahn, P. T. Fox, J. L. Lancaster, K. Saleem, W. Shelledy, K. Zilles, P. M. Thompson, O. Coulon, J.-F. Mangin, J. Blangero, and J. Rogers. Genetics of primary cerebral gyrification: Heritability of length, depth and area of primary sulci in an extended pedigree of Papio baboons. Neuroimage, 2010. [bibtex-entry]


  30. J. Andoh, D. Rivière, J-F. Mangin, E. Artiges, Y. Cointepas, M-L. Paillère-Martinot, J-L. Martinot, and A. Cachia. A low-cost MRI-guided method for TMS coil positioning. Brain Stimulation, 2:123-131, 2009. Keyword(s): brainvisa. [bibtex-entry]


  31. J. Dubois, L. Hertz-Pannier, A. Cachia, J.-F. Mangin, D. Le Bihan, and G. Dehaene-Lambertz. Structural asymmetries in the infant language and sensori-motor networks. Cereb. Cortex, 19(2):414-423, 2009. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  32. J. Penttilä, A. Cachia, J.-L. Martinot, D. Ringuenet, M. Wessa, J. Houenou, A. Galinowski, F. Bellivier, T. Gallarda, E. Duchesnay, E. Artiges, M. Leboyer, J.-P. Olié, J.-F. Mangin, and M.-L. Paillère-Martinot. Cortical folding difference between patients with early-onset and patients with intermediate-onset bipolar disorder. Bipolar Disorder, 11(4):361-70, 2009. Keyword(s): brainvisa. [bibtex-entry]


  33. J. Penttilä, M-L Paillère-Martinot, J-L Martinot, D. Ringuenet, A. Galinowski, J. Houenou, F. Bellivier, M. Wessa, E. Artiges, T. Gallarda, P. Bruguière, F. Pinabel, M. Leboyer, J-P Olié, E. Duchesnay, J-F Mangin, and A. Cachia. Cortical folding in patients with bipolar disorder or unipolar depression. J Psychiatry Neurosci., 34(2):127-35, 2009. Keyword(s): brainvisa. [bibtex-entry]


  34. J. Andoh, E Artiges, C Pallier, D. Rivière, J.-F. Mangin, M. L. Paillère-Martinot, and J.-L. Martinot. Priming frequencies of transcranial magnetic stimulation over Wernicke's area modulate word detection. Cereb. Cortex, 18(1):210-6, 2008. Keyword(s): brainvisa. [bibtex-entry]


  35. A. Cachia, M.-L. Paillère-Martinot, A. Galinowski, D. Januel, R. De Beaurepaire, F. Bellivier, E. Artiges, T. Gallarda, J. Andoh, D. Bartrés-Faz, E. Duchesnay, D. Rivière, Y. Cointepas, M. Plaze, J.-F. Mangin, and J.-L. Martinot. Cortical folding abnormalities in schizophrenia patients with resistant auditory hallucinations. Neuroimage, 39(3):927-935, 2008. Keyword(s): Sulci, Anatomy, brainvisa. [bibtex-entry]


  36. M. D. Cykowski, P Kochunov, R. J. Ingham, J. C. Ingham, J.-F. Mangin, D. Rivière, J. L. Lancaster, and P. T. Fox. Perisylvian Sulcal Morphology and Cerebral Asymmetry Patterns in Adults Who Stutter. Cereb. Cortex, 18(3):571-83, 2008. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  37. J. Dubois, M. Benders, C. Borradori-Tolsa, A. Cachia, F. Lazeyras, R. Ha-Vinh Leuchter, S. V. Sizonenko, S. K. Warfield, J.-F. Mangin, and P. S. Hüppi. Primary cortical folding in the human newborn: an early marker of later functional development. Brain, 131(8):2028-41, 2008. Keyword(s): Sulci, Anatomy, brainvisa. [bibtex-entry]


  38. J. Dubois, M. Benders, A. Cachia, F. Lazeyras, R. Ha-Vinh Leuchter, S.V. Sizonenko, C. Borradori-Tolsa, J.-F. Mangin, and P. S. Hüppi. Mapping the early cortical folding process in the preterm newborn brain. Cereb. Cortex, 18(6):1444-54, 2008. Keyword(s): Sulci, Anatomy, brainvisa. [bibtex-entry]


  39. J. Dubois, G. Dehaene-Lambertz, M. Perrin, J.-F. Mangin, Y. Cointepas, E. Duchesnay, D. Le Bihan, and L. Hertz-Pannier. Asynchrony of the early maturation of white matter bundles in healthy infants: quantitative landmarks revealed noninvasively by diffusion tensor imaging. Hum. Brain Mapp., 29(1):14-27, 2008. Keyword(s): brainvisa. [bibtex-entry]


  40. E. Jouvent, J.-F. Mangin, R. Porcher, A. Viswanathan, M. O'Sullivan, J.-P. Guichard, M. Dichgans, M.-G. Bousser, and H. Chabriat. Cortical changes in cerebral small vessel diseases: a 3D MRI study of cortical morphology in CADASIL. Brain, 131(8):2201-8, 2008. Keyword(s): brainvisa. [bibtex-entry]


  41. P. Kochunov, P.M. Thompson, T.R. Coyle, J. L. Lancaster, V. Kochunov, D.R. Royall, J.-F. Mangin, D. Rivière, and P. T. Fox. Relationship among neuroimaging indices of cerebral health during normal aging. Hum. Brain Mapp., 29(1):36-45, 2008. Keyword(s): Sulci, Diffusion, brainvisa. [bibtex-entry]


  42. M. Perrin, Y. Cointepas, A. Cachia, C. Poupon, B. Thirion, D. Rivière, P. Cathier, V. El Kouby, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Connectivity-Based Parcellation of the Cortical Mantle Using q-Ball Diffusion Imaging. Int J Biomed Imaging, 2008. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  43. J. Dauguet, T. Delzescaux, F. Condé, J.-F. Mangin, N. Ayache, P. Hantraye, and V. Frouin. Three-dimensional reconstruction of stained histological slices and 3D non-linear registration with in-vivo MRI for whole baboon brain. J Neurosci Methods, 164(1):191-204, 2007. Keyword(s): Registration, brainvisa. [bibtex-entry]


  44. T.R. Coyle, P. Kochunov, R. D. Patel, F. G. Nery, J. L. Lancaster, J.-F. Mangin, D. Rivière, D.R. Pillow, G.J. Davis, M.A. Nicoletti, E. Serap Monkul, P. T. Fox, and J.C. Soares. Cortical sulci and bipolar disorder. Neuroreport, 17(16):1739-42, 2006. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  45. P. Kochunov, J.-F. Mangin, T.R. Coyle, J. L. Lancaster, P.M. Thompson, D. Rivière, Y. Cointepas, J. Régis, A. Schlosser, D.R. Royall, K. Zilles, J. Mazziotta, A.W. Toga, and P. T. Fox. Age-related morphology trends of cortical sulci. Hum Brain Mapp., 26(3):210-220, 2005. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  46. M. Perrin, C. Poupon, B. Rieul, P. Leroux, A. Constantinesco, J.-F. Mangin, and D. Le Bihan. Validation of q-ball imaging with a diffusion fibre-crossing phantom on a clinical scanner. Phil. Trans. R. Soc. B, 360:881-891, 2005. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  47. J.-F. Mangin, F. Poupon, E. Duchesnay, D. Rivière, A. Cachia, D. L. Collins, A. C. Evans, and J. Régis. Brain Morphometry using 3D Moment Invariants. Medical Image Analysis, 8:187-196, 2004. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  48. J.-F. Mangin, D. Rivière, A. Cachia, E. Duchesnay, Y. Cointepas, D. Papadopoulos-Orfanos, D. L. Collins, A. C. Evans, and J. Régis. Object-based morphometry of the cerebral cortex. IEEE Trans. Med. Imag., 23(8):968-982, Aug. 2004. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  49. J.-F. Mangin, D. Rivière, A. Cachia, E. Duchesnay, Y. Cointepas, D. Papadopoulos-Orfanos, P. Scifo, T. Ochiai, F. Brunelle, and J. Régis. A framework to study the cortical folding patterns. Neuroimage, 23:S129-S138, 2004. Keyword(s): Sulci, Anatomy, brainvisa. [bibtex-entry]


  50. T. Ochiai, S. Grimault, D. Scavarda, G. Roch, T. Hori, D. Rivière, J.-F. Mangin, and J. Régis. Sulcal pattern and morphology of the superior temporal sulcus. Neuroimage, 22(2):706-719, 2004. Keyword(s): brainvisa. [bibtex-entry]


  51. D. Rivière, J.-F. Mangin, D. Papadopoulos-Orfanos, J.-M. Martinez, V. Frouin, and J. Régis. Automatic recognition of cortical sulci of the Human Brain using a congregation of neural networks. Medical Image Analysis, 6(2):77-92, 2002. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  52. J.-F. Mangin, V. Frouin, J. Régis, I. Bloch, P. Belin, and Y. Samson. Towards Better Management of Cortical Anatomy in Multi-modal Multi-individual Brain Studies. Physica Medica, 12(Supplement 1):103-107, June 1996. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  53. J.-F. Mangin, V. Frouin, I. Bloch, J. Régis, and J. Lopez-Krahe. From 3D Magnetic Resonance Images to Structural Representations of the Cortex Topography Using Topology Preserving Deformations. Journal of Mathematical Imaging and Vision, 5(4):297-318, 1995. Keyword(s): Sulci, brainvisa. [bibtex-entry]


Conference articles

  1. G. Auzias, F. De Guio, A. Pepe, F. Rousseau, J.-F. Mangin, N. Girard, J. Lefèvre, and O. Coulon. Model-driven parameterization of fetal cortical surfaces. In Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on, pages 1260-1263, 2015. IEEE. [bibtex-entry]


  2. O. Coulon, J. Lefèvre, S. Kloppel, H. Siebner, and J.-F. Mangin. Quasi-isometric length parameterization of cortical sulci: Application to handedness and the central sulcus morphology. In Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on, pages 1268-1271, 2015. IEEE. [bibtex-entry]


  3. S. Lefranc, Z. Y. Sun, P. Roca, C. Poupon, D. Le Bihan, J.-F. Mangin, and D. Rivière. Concomitant variability of the central sulcus morphology and adjacent patterns. In Proc. Proc. IEEE ISBI, 2015. Keyword(s): brainvisa, lnao. [bibtex-entry]


  4. S. Lefranc, P. Roca, M. Perrot, D. Duclap, C. Poupon, D. Le Bihan, J.-F. Mangin, and D. Rivière. Inter-subject connectivity-based parcellation of the whole human cortical surface. In Proc. 20th HBM, 2014. Keyword(s): brainvisa, lnao. [bibtex-entry]


  5. S. Lefranc, P. Roca, M. Perrot, C. Poupon, O. Coulon, D. Le Bihan, L. Hertz-Pannier, J.-F. Mangin, and D. Rivière. Validation of consistent inter-subject connectivity-based parcellation. In Proc. Proc. IEEE ISBI, 2014. Keyword(s): brainvisa, lnao. [bibtex-entry]


  6. C. Fischer, G. Operto, S. Laguitton, M. Perrot, I. Denghien, D. Rivière, and J.-F. Mangin. Morphologist 2012: the new morphological pipeline of BrainVISA. In Proc. HBM, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  7. G. Operto, G. Auzias, A. Le Troter, M. Perrot, D. Rivière, J. Dubois, P. S. Hüppi, O. Coulon, and J.-F. Mangin. Structural group analysis of cortical curvature and depth patterns in the developing brain. In Proc. 9th Proc. IEEE ISBI, pages 422-425, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  8. D. Rivière, B. Bernhardt, H. Kim, S.-J. Hong, M. Perrot, J.-F. Mangin, J. Régis, N. Bernasconi, and A. Bernasconi. Focal epileptogenic malformations of cortical development are associated with diffuse sulcal anomalies. In Proc. 17th HBM, 2011. Keyword(s): brainvisa, Sulci, Anatomy. [bibtex-entry]


  9. P. Roca, A. Tucholka, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. Inter-subject Connectivity-based Parcellation of a Patch of Cerebral Cortex. In MICCAI 2010, LNCS 5762, Springer-Verlag, 2010. Keyword(s): brainvisa. [bibtex-entry]


  10. P. Roca, A. Tucholka, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. Inter-subject Connectivity-based Parcellation of the Human Post-central Gyrus. In Proc. 16th HBM, 2010. Keyword(s): brainvisa. [bibtex-entry]


  11. M. Perrot, D. Rivière, A. Tucholka, and J.-F. Mangin. Joint Bayesian Cortical Sulci Recognition and Spatial Normalization. In Proc. 21th IPMI, LNCS-5636, Williamsburg, VA, pages 176-187, July 2009. Springer Verlag. [bibtex-entry]


  12. P. Roca, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. DWI-based parcellation of the human cortex with a new dimension reduction of the connectivity matrix. In Proc. 15th HBM, 2009. Keyword(s): brainvisa. [bibtex-entry]


  13. P. Guevara, M. Perrin, P. Cathier, Y. Cointepas, D. Rivière, C. Poupon, and J.-F. Mangin. Connectivity-based parcellation of the cortical surface using Q-ball imaging. In 5th Proc. IEEE ISBI, Paris, France, pages 903-906, May 2008. [bibtex-entry]


  14. Z. Y. Sun, D. Rivière, and E. Duchesnay, B. Thirion, F. Poupon, and J.-F. Mangin. Defining cortical sulcus patterns using partial clustering based on bootstrap and bagging. In 5th Proc. IEEE ISBI, Paris, France, pages 1629-1632, May 2008. Keyword(s): brainvisa. [bibtex-entry]


  15. A. Tucholka, B. Thirion, M. Perrot, P. Pinel, J.-F. Mangin, and J.-B. Poline. Probabilistic anatomo-functional parcellation of the cortex: how many regions?. In 11thProc. MICCAI, LNCS Springer Verlag, New-York, USA, 2008. Keyword(s): brainvisa. [bibtex-entry]


  16. A. Tucholka, B. Thirion, P. Pinel, J.-B. Poline, and J.-F. Mangin. Triangulating cortical functional networks with anatomical landmarks. In 5th Proc. IEEE ISBI, Paris, France, pages 612-615, May 2008. Keyword(s): brainvisa. [bibtex-entry]


  17. J.-F. Mangin, V. El Kouby, P. Guevara, M. Perrin, P. Cathier, Y. Cointepas, and C. Poupon. The structural paradigm when analyzing diffusion data. In the SNDS bi-national workshop on “MRI of brain connectivity and microstructure: measurement and validation”, Dead Sea, Israel, 2007. Keyword(s): brainvisa. [bibtex-entry]


  18. Z. Y. Sun, D. Rivière, F. Poupon, J. Régis, and J.-F. Mangin. Automatic inference of sulcus patterns using 3D moment invariants. In 10th Proc. MICCAI, LNCS Springer Verlag, pages 515-22, 2007. Keyword(s): brainvisa. [bibtex-entry]


  19. C. Clouchoux, O. Coulon, J.-L Anton, and J.-F. Mangin, and J. Régis. A new cortical surface parcellation model and its automatic implementation. In Proc. 9th MICCAI, LNCS 4191, Copenhaegen, Denmark, pages 193-200, Oct. 2006. Springer Verlag. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  20. M. Perrin, C. Poupon, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Q-ball imaging simulation with a numerical diffusion fiber crossing phantom. In 12th HBM Neuroimage, number 1164, Florence, Italie, 2006. Keyword(s): brainvisa. [bibtex-entry]


  21. C. Poupon, F. Poupon, L. Allirol, and J.-F. Mangin. A database dedicated to anatomo-functional study of human brain connectivity. In 12th HBM Neuroimage, number 646, Florence, Italie, 2006. Keyword(s): brainvisa. [bibtex-entry]


  22. C. Clouchoux, O. Coulon, D. Rivière, A. Cachia, J.-F. Mangin, and J. Régis. Anatomically constrained surface parameterization for cortical localization. In MICCAI'05, pages 344-351, 2005. Keyword(s): Sulci, LongConfPaper, brainvisa, cortical_surface. [bibtex-entry]


  23. G. Douaud, C. Poupon, Y. Cointepas, J.-F. Mangin, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A.-C. Bachoud-Lévi, P. Hantraye, and P. Remy. Diffusion tensor imaging (DTI) in Huntington's disease patients: analyses of fractional anisotropy (FA) maps and apparent diffusion coefficient (ADC) maps. In ISMRM Workshop on Methods for Quantitative Diffusion MRI of Human Brain, Lake Louise, Canada, 2005. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  24. G. Douaud, C. Poupon, Y. Cointepas, J.-F. Mangin, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A.-C. Bachoud-Lévi, P. Hantraye, and P. Remy. Diffusion tensor imaging (DTI) in Huntington's disease patients: analyses of fractional anisotropy (FA) maps and apparent diffusion coefficient (ADC) maps. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Diffusion, Anatomy, brainvisa. [bibtex-entry]


  25. G. Douaud, C. Poupon, Y. Cointepas, J.-F. Mangin, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A.-C. Bachoud-Lévi, P. Hantraye, and P. Remy. Diffusion tensor imaging in patients with early Huntington's disease reveals frontal and striatal abnormalities. In 57th Annual Meeting of the American Academy of Neurology, 2005. Keyword(s): brainvisa. [bibtex-entry]


  26. V. El Kouby, Y. Cointepas, C. Poupon, J.-B. Poline, and J.-F. Mangin. Main fiber tracks detection through classification of MR diffusion imaging data. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  27. V. El Kouby, Y. Cointepas, C. Poupon, D. Rivière, N. Golestani, J.-B. Poline, D. Le Bihan, and J.-F. Mangin. MR Diffusion-Based Inference of a Fiber Bundle Model from a Population of Subjects. In MICCAI'05, pages 196-204, 2005. Keyword(s): Diffusion, LongConfPaper, brainvisa. [bibtex-entry]


  28. P. Kochunov, D. Rivière, J. L. Lancaster, J.-F. Mangin, Y. Cointepas, D. Papadopoulos-Orfanos, D. C. Glahn, P. T. Fox, and J. Rogers. Development of high-resolution MRI imaging and image processing for live and post-mortem primates (Papio hamadryas). In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  29. M. Perrin, Y. Cointepas, C. Poupon, B. Rieul, N. Golestani, C. Pallier, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Regularized probabilistic tracking with Q-ball fields. In ISMRM Workshop on Methods for Quantitative Diffusion MRI of Human Brain, Lake Louise, Canada, 2005. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  30. M. Perrin, Y. Cointepas, C. Poupon, B. Rieul, N. Golestani, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Fiber tracking in Q-ball fields using regularized particle trajectories. In Inf Process Med Imaging, volume 19, pages 52-63, 2005. Keyword(s): Diffusion, LongConfPaper, brainvisa. [bibtex-entry]


  31. C. Poupon, M. Perrin, B. Rieul, J.-F. Mangin, and D. Le Bihan. Validation of Q-ball imaging with a diffusion fiber crossing phantom on a clinical scanner. In ISMRM Workshop on Methods for Quantitative Diffusion MRI of Human Brain, Lake Louise, Canada, 2005. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  32. C. Clouchoux, O. Coulon, A. Cachia, D. Rivière, J.-F. Mangin, and J. Régis. Towards an anatomically meaningful parameterization of the cortical surface. In MICCAI, volume 3216 of Lecture Notes in Computer Science, St-Malo, France, pages 1046-1047, 2004. Springer-Verlag. Keyword(s): brainvisa. [bibtex-entry]


  33. Y. Cointepas, C. Poupon, R. Maroy, D. Rivière, D. Le Bihan, and J.-F. Mangin. A freely available Anatomist/BrainVISA package for analysis of diffusion MR images. In Proc. 9th HBM CD-Rom Neuroimage vol 19 (2), New York,, June19--22 2003. Keyword(s): brainvisa. [bibtex-entry]


  34. D. Rivière, J. Régis, Y. Cointepas, D. Papadopoulos-Orfanos, A. Cachia, and J.-F. Mangin. A freely available Anatomist/BrainVISA package for structural morphometry of the cortical sulci. In Proc. 9th HBM, Neuroimage 19(2), New York,, pages 934, 2003. Keyword(s): brainvisa. [bibtex-entry]


  35. Y. Cointepas, J.-F. Mangin, L. Garnero, J.-B. Poline, and H. Benali. BrainVISA: Software platform for visualization and analysis of multi-modality brain data. In Proc. 7th HBM, Brighton, United Kingdom, pages S98, 2001. Keyword(s): brainvisa, Computer Science. [bibtex-entry]


Miscellaneous

  1. P. Roca, and D. Rivière, and J.-F. Mangin. Etude de l'équation eikonale et nouveaux descripteurs des sillons du cortex. Master's thesis, Supélec, Université Paul Verlaine de Metz, 2007. Keyword(s): brainvisa. [bibtex-entry]



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