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Publications of year 2011

Articles in journal or book chapters

  1. G. Auzias, O. Colliot, J. A. Glaunès, M. Perrot, J.-F. Mangin, A. Trouvé, and S. Baillet. Diffeomorphic Brain Registration Under Exhaustive Sulcal Constraints. IEEE Trans Med Imaging, 30(6):1214-1227, 2011.
    @article{Auzias11,
    author = {G. Auzias and O. Colliot and J. A. Glaunès and M. Perrot and J.-F. Mangin and A. Trouvé and S. Baillet},
    title = {Diffeomorphic Brain Registration Under Exhaustive Sulcal Constraints},
    journal = {IEEE Trans Med Imaging},
    year = 2011,
    volume = 30,
    number = 6,
    pages = {1214--1227} 
    }
    


  2. P. Fillard, M. Descoteaux, A. Goh, S. Gouttard, B. Jeurissen, J. Malcolm, A. Ramirez-Manzanares, M. Reisert, K. Sakaie, F. Tensaouti, T. Yo, J.-F. Mangin, and C. Poupon. Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom. Neuroimage, 56(1):220-34, 2011.
    @article{Fillard11,
    author = {P. Fillard and M. Descoteaux and A. Goh and S. Gouttard and B. Jeurissen and J. Malcolm and A. Ramirez-Manzanares and M. Reisert and K. Sakaie and F. Tensaouti and T. Yo and J.-F. Mangin and C. Poupon},
    title = {Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom},
    journal = {Neuroimage},
    year = 2011,
    volume = 56,
    number = 1,
    pages = {220--34} 
    }
    


  3. H. Glasel, F. Leroy, J. Dubois, L. Hertz-Pannier, J.-F. Mangin, and G. Dehaene-Lambertz. A robust cerebral asymmetry in the infant brain: The rightward superior temporal sulcus. Neuroimage, 2011.
    @article{Glasel11,
    author = {H. Glasel and F. Leroy and J. Dubois and L. Hertz-Pannier and J.-F. Mangin and G. Dehaene-Lambertz},
    title = {A robust cerebral asymmetry in the infant brain: The rightward superior temporal sulcus},
    journal = {Neuroimage},
    year = 2011 
    }
    


  4. E. Jouvent, C. Poupon, F. Gray, C. Paquet, J.-F. Mangin, D Le Bihan, and H. Chabriat. Intracortical infarcts in small vessel disease: a combined 7-T postmortem MRI and neuropathological case study in cerebral autosomal-dominant arteriopathy with subcortical infarcts and leukoencephalopathy. Stroke, 42(3):27-30, 2011.
    @article{Jouvent11b,
    author = {E. Jouvent and C. Poupon and F. Gray and C. Paquet and J.-F. Mangin and Le~Bihan, D, and H. Chabriat},
    title = {Intracortical infarcts in small vessel disease: a combined {7-T} postmortem {MRI} and neuropathological case study in cerebral autosomal-dominant arteriopathy with subcortical infarcts and leukoencephalopathy},
    journal = {Stroke},
    year = 2011,
    volume = 42,
    number = 3,
    pages = {27--30} 
    }
    


  5. E. Jouvent, S. Reyes S, J.-F. Mangin, P. Roca, M. Perrot, B. Thyreau, D. Hervé, M. Dichgans, and H. Chabriat. Apathy is related to cortex morphology in CADASIL: A sulcal-based morphometry study. Neurology, 76(17):1472-7, 2011.
    @article{Jouvent11a,
    author = {E. Jouvent and S. Reyes S and J.-F. Mangin and P. Roca and M. Perrot and B. Thyreau and D. Hervé and M. Dichgans and H. Chabriat},
    title = {Apathy is related to cortex morphology in CADASIL: A sulcal-based morphometry study},
    journal = {Neurology},
    year = 2011,
    volume = 76,
    number = 17,
    pages = {1472--7} 
    }
    


  6. F. Leroy, H. Glasel, J. Dubois, L. Hertz-Pannier, B. Thirion, J.-F. Mangin, and G. Dehaene-Lambertz. Early maturation of the linguistic dorsal pathway in human infants. J Neurosci, 31(4):1500-6, 2011.
    @article{Leroy11,
    author = {F. Leroy and H. Glasel and J. Dubois and L. Hertz-Pannier and B. Thirion and J.-F. Mangin and G. Dehaene-Lambertz},
    title = {Early maturation of the linguistic dorsal pathway in human infants},
    journal = {J Neurosci},
    year = 2011,
    volume = 31,
    number = 4,
    pages = {1500--6} 
    }
    


  7. F. Leroy, J.-F. Mangin, F. Rousseau, H. Glasel, L. Hertz-Pannier, J. Dubois, and G. Dehaene-Lambertz. Atlas-free surface reconstruction of the cortical grey-white interface in infants. PLoS One, 6(11):e27128, 2011. Keyword(s): brainvisa, lnao.
    @article{Leroy11b,
    author = {F. Leroy and J.-F. Mangin and F. Rousseau and H. Glasel and L. Hertz-Pannier and J. Dubois and G. Dehaene-Lambertz},
    title = {Atlas-free surface reconstruction of the cortical grey-white interface in infants},
    journal = {PLoS One},
    year = 2011,
    volume = 6,
    number = 11,
    pages = {e27128},
    keywords = {brainvisa, lnao} 
    }
    


  8. M. Perrot, D. Rivière, and J.-F. Mangin. Cortical sulci recognition and spatial normalization. Medical Image Analysis, 15(4):529-550, 2011. Keyword(s): sulci, SPAM, brainvisa.
    @article{Perrot11,
    author = {M. Perrot and D. Rivière and J.-F. Mangin},
    title = {Cortical sulci recognition and spatial normalization},
    journal = {Medical Image Analysis},
    year = 2011,
    volume = 15,
    number = 4,
    pages = {529--550},
    keywords = {sulci, SPAM, brainvisa},
    pdf = {http://static.lnao.fr/papers/perrot_matthieu_media2011_preprint.pdf} 
    }
    


  9. J. Régis, M. Tamura, M. Park, A. McGonigal, D. Rivière, O. Coulon, F. Bartolomei, N. Girard, D. Figarella-Branger, P. Chauvel, and J.-F. Mangin. Subclinical abnormal gyration pattern, a potential anatomic marker of epileptogenic zone in patients with MRI–negative frontal lobe epilepsy. Neurosurgery, 69(1):80-94, 2011. Keyword(s): Sulci, brainvisa.
    @article{Regis11,
    author = {J. Régis and M. Tamura and M. Park and A. McGonigal and D. Rivière and O. Coulon and F. Bartolomei and N. Girard and D. Figarella-Branger and P. Chauvel and J.-F. Mangin},
    title = {Subclinical abnormal gyration pattern, a potential anatomic marker of epileptogenic zone in patients with {MRI–negative} frontal lobe epilepsy},
    journal = {Neurosurgery},
    year = 2011,
    volume = 69,
    number = 1,
    pages = {80--94},
    keywords = {Sulci, brainvisa} 
    }
    


  10. A. Sarrazin, B. Etain, F. E. Vederine, M. A d'Albis, N. Hamdani, C. Daban, M. Delavest, J. P. Lépine, M. Leboyer, J.-F. Mangin, C. Poupon, and J. Houenou. MRI exploration of pineal volume in bipolar disorder. J Affect Disord., 135(1-3):377-9, 2011.
    @article{Sarrazin11,
    author = {A. Sarrazin and B. Etain and F. E. Vederine and d'Albis, M. A and N. Hamdani and C. Daban and M. Delavest and J. P. Lépine and M. Leboyer and J.-F. Mangin and C. Poupon and J. Houenou},
    title = {{MRI} exploration of pineal volume in bipolar disorder},
    journal = {J Affect Disord.},
    year = 2011,
    volume = 135,
    number = {1-3},
    pages = {377--9} 
    }
    


Conference articles

  1. M. Audette, D. Rivière, M. Ewend, A. Enquobahrie, and S. Valette. Approach-guided controlled resolution brain meshing for fe-based interactive neurosurgery simulation. In Workshop on Mesh Processing in Medical Image Analysis, in conjunction with MICCAI 2011, pages 176-186, 2011.
    @inproceedings{Audette11,
    author = {M. Audette and D. Rivière and M. Ewend and A. Enquobahrie and S. Valette},
    title = {Approach-guided controlled resolution brain meshing for fe-based interactive neurosurgery simulation},
    booktitle = {Workshop on Mesh Processing in Medical Image Analysis, in conjunction with MICCAI 2011},
    year = 2011,
    pages = {176--186} 
    }
    


  2. M. Audette, D. Rivière, C. Law, L. Ibanez, S. R. Aylward, J. Finet, X. Wu, and M. G. Ewend. Approach-specific multi-grid anatomical modeling for neurosurgery simulation with public-domain and open-source software. In SPIE Medical Imaging, pages 79642J-79642J, 2011. International Society for Optics and Photonics.
    @inproceedings{Audette11b,
    author = {M. Audette and D. Rivière and C. Law and L. Ibanez and S. R. Aylward and J. Finet and X. Wu and M. G. Ewend},
    title = {Approach-specific multi-grid anatomical modeling for neurosurgery simulation with public-domain and open-source software},
    booktitle = {SPIE Medical Imaging},
    year = 2011,
    pages = {79642J--79642J},
    organization = {International Society for Optics and Photonics} 
    }
    


  3. G. Auzias, J. Lefèvre, A. Le Troter, C. Fischer, M. Perrot, J. Régis, and O. Coulon. Model-driven harmonic parameterization of the cortical surface. In Proc. MICCAI, volume 14, pages 310-317, 2011. Keyword(s): brainvisa.
    @inproceedings{Auzias11b,
    author = {G. Auzias and J. Lefèvre and A. Le Troter and C. Fischer and M. Perrot and J. Régis and O. Coulon},
    title = {Model-driven harmonic parameterization of the cortical surface},
    booktitle = {{P}roc. {{MICCAI}}},
    year = 2011,
    volume = 14,
    pages = {310--317},
    keywords = {brainvisa} 
    }
    


  4. D. Geffroy, D. Rivière, I. Denghien, N. Souedet, S. Laguitton, and Y. Cointepas. BrainVISA: a complete software platform for neuroimaging. In Python in Neuroscience workshop, Paris, Aug. 2011. Keyword(s): brainvisa.
    @conference{Geffroy11,
    author = {D. Geffroy and D. Rivière and I. Denghien and N. Souedet and S. Laguitton and Y. Cointepas},
    title = {BrainVISA: a complete software platform for neuroimaging},
    booktitle = {Python in Neuroscience workshop},
    year = 2011,
    address = {Paris},
    month = {Aug.},
    keywords = {brainvisa},
    pdf = {http://static.lnao.fr/papers/brainvisa_python_neuroscience.pdf} 
    }
    


  5. S. Laguitton, D. Rivière, D. Geffroy, N. Souedet, and Y. Cointepas. Soma-Workflow: open source software for easy access to parallel computing resources. In Proc. 17th HBM, 2011. Keyword(s): parallel computing, brainvisa.
    @conference{Laguitton11a,
    author = {S. Laguitton and D. Rivière and D. Geffroy and N. Souedet and Y. Cointepas},
    title = {Soma-Workflow: open source software for easy access to parallel computing resources},
    booktitle = {{P}roc. 17th {{HBM}}},
    year = 2011,
    keywords = {parallel computing, brainvisa},
    pdf = {http://static.brainvisa.info/soma-workflow/poster_HBM_2011_somaworkflow.pdf} 
    }
    


  6. S. Laguitton, D. Rivière, T. Vincent, C. Fischer, D. Geffroy, N. Souedet, I. Denghien, and Y. Cointepas. Soma-workflow: a unified and simple interface to parallel computing resources. In Python in Neuroscience workshop, Paris, Aug. 2011. Keyword(s): parallel computing, brainvisa.
    @inproceedings{Laguitton11c,
    author = {S. Laguitton and D. Rivière and T. Vincent and C. Fischer and D. Geffroy and N. Souedet and I. Denghien and Y. Cointepas},
    title = {Soma-workflow: a unified and simple interface to parallel computing resources},
    booktitle = {Python in Neuroscience workshop},
    year = 2011,
    address = {Paris},
    month = {Aug.},
    keywords = {parallel computing, brainvisa},
    pdf = {http://static.brainvisa.info/soma-workflow/python_neuroscience_soma_workflow.pdf} 
    }
    


  7. S. Laguitton, D. Rivière, T. Vincent, C. Fischer, D. Geffroy, N. Souedet, I. Denghien, and Y. Cointepas. Soma-workflow: a unified and simple interface to parallel computing resources. In MICCAI Workshop on High Performance and Distributed Computing for Medical Imaging, Toronto, Sep. 2011. Keyword(s): parallel computing, brainvisa.
    @inproceedings{Laguitton11b,
    author = {S. Laguitton and D. Rivière and T. Vincent and C. Fischer and D. Geffroy and N. Souedet and I. Denghien and Y. Cointepas},
    title = {Soma-workflow: a unified and simple interface to parallel computing resources},
    booktitle = {{MICCAI} {W}orkshop on {H}igh {P}erformance and {D}istributed {C}omputing for {M}edical {I}maging},
    year = 2011,
    address = {Toronto},
    month = {Sep.},
    keywords = {parallel computing, brainvisa},
    pdf = {http://static.brainvisa.info/soma-workflow/MICCAI_2011_soma_workflow.pdf} 
    }
    


  8. D. Rivière, B. Bernhardt, H. Kim, S.-J. Hong, M. Perrot, J.-F. Mangin, J. Régis, N. Bernasconi, and A. Bernasconi. Focal epileptogenic malformations of cortical development are associated with diffuse sulcal anomalies. In Proc. 17th HBM, 2011. Keyword(s): brainvisa, Sulci, Anatomy.
    @conference{Riviere11a,
    author = {D. Rivière and B. Bernhardt and H. Kim and S.-J. Hong and M. Perrot and J.-F. Mangin and J. Régis and N. Bernasconi and A. Bernasconi},
    title = {Focal epileptogenic malformations of cortical development are associated with diffuse sulcal anomalies},
    booktitle = {{P}roc. 17th {{HBM}}},
    year = 2011,
    keywords = {brainvisa, Sulci, Anatomy},
    pdf = {http://static.lnao.fr/papers/riviere-hbm11.pdf} 
    }
    


  9. D. Rivière, D. Geffroy, I. Denghien, N. Souedet, and Y. Cointepas. Anatomist: a python framework for interactive 3D visualization of neuroimaging data. In Python in Neuroscience workshop, 2011. Keyword(s): brainvisa.
    @conference{Riviere11b,
    author = {D. Rivière and D. Geffroy and I. Denghien and N. Souedet and Y. Cointepas},
    title = {Anatomist: a python framework for interactive 3D visualization of neuroimaging data},
    booktitle = {Python in Neuroscience workshop},
    year = 2011,
    keywords = {brainvisa},
    pdf = {http://static.brainvisa.info/pyanatomist/anatomist_euroscipy_neuro.pdf} 
    }
    



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