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Publications of year 2009

Thesis

  1. M. Perrot. Reconnaissance Automatique des Sillons Corticaux. PhD thesis, ENS de Cachan, Cachan , France, Oct. 2009. Keyword(s): Sulci, Computer Science, Anatomy, brainvisa, Registration, Markov Random Field, Circular distributions, Riemannian calculus, IFR49. 
    @phdthesis{perrot09b,
author = {M. Perrot},
title = {Reconnaissance Automatique des Sillons Corticaux},
school = {ENS de Cachan},
year = 2009,
type = {{PhD} thesis},
address = {Cachan , France},
month = {Oct.},
keywords = {Sulci,Computer Science,Anatomy,brainvisa,Registration,Markov Random Field,Circular distributions,Riemannian calculus, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Perrot-thesis09.pdf} 
}


Articles in journal or book chapters

  1. J. Andoh, D. Rivière, J-F. Mangin, E. Artiges, Y. Cointepas, M-L. Paillère-Martinot, J-L. Martinot, and A. Cachia. A low-cost MRI-guided method for TMS coil positioning. Brain Stimulation, 2:123-131, 2009. Keyword(s): brainvisa, IFR49. 
    @article{andoh09,
author = {J. Andoh and D. Rivière and J-F. Mangin and E. Artiges and Y. Cointepas and M-L. Paillère-Martinot and J-L. Martinot and A. Cachia},
title = {A low-cost {MRI}-guided method for {TMS} coil positioning},
journal = {Brain Stimulation},
year = 2009,
volume = 2,
pages = {123--131},
keywords = {brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Andoh-BrainStim09.pdf},
timestamp = {2009.01.06} 
}


  2. C. Delmaire, M. Vidailhet, D. Wassermann, M. Descoteaux, R. Valabregue, F. Bourdin, C. Lenglet, S. Sangla, A. Terrier, R. Deriche, and S. Lehéricy. Diffusion Abnormalities in the Primary Sensorimotor Pathways in Writer's Cramp. Archives of Neurology, in press, 2009. Keyword(s): IFR49, brainvisa, odyssee, CENIR, U679, U678. 
    @article{Delmaire09,
author = {Delmaire, C. and Vidailhet, M. and Wassermann, D. and Descoteaux, M. and Valabregue, R. and Bourdin, F. and Lenglet, C. and Sangla, S. and Terrier, A. and Deriche, R. and Lehéricy, S.},
title = {Diffusion Abnormalities in the Primary Sensorimotor Pathways in Writer's Cramp},
journal = {Archives of Neurology},
year = 2009,
volume = {in press},
keywords = { IFR49, brainvisa, odyssee, CENIR, U679, U678},
timestamp = {2009.01.14} 
}


  3. G. Douaud, T. E. Behrens, C. Poupon, Y. Cointepas, S. Jbabdi, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A. C. Bachoud-Lévi, P. Hantraye, and P. Remy. In vivo evidence for the selective subcortical degeneration in Huntington's disease. Neuroimage, 46(4):958-966, 2009. Keyword(s): brainvisa, IFR49. 
    @article{douaud09,
author = {G. Douaud and T. E. Behrens and C. Poupon and Y. Cointepas and S. Jbabdi and V. Gaura and N. Golestani and P. Krystkowiak and C. Verny and P. Damier and A. C. Bachoud-Lévi and P. Hantraye and P. Remy},
title = {In vivo evidence for the selective subcortical degeneration in {Huntington's} disease},
journal = {Neuroimage},
year = 2009,
volume = 46,
number = 4,
pages = {958--966},
keywords = {brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Douaud-NI09.pdf} 
}


  4. J. Dubois, L. Hertz-Pannier, A. Cachia, J.-F. Mangin, D. Le Bihan, and G. Dehaene-Lambertz. Structural asymmetries in the infant language and sensori-motor networks. Cereb. Cortex, 19(2):414-423, 2009. Keyword(s): Diffusion, brainvisa, IFR49. 
    @article{dubois09,
author = {J. Dubois and L. Hertz-Pannier and A. Cachia and J.-F. Mangin and Le~Bihan, D. and G. Dehaene-Lambertz},
title = {Structural asymmetries in the infant language and sensori-motor networks},
journal = {{{C}ereb. {C}ortex}},
year = 2009,
volume = 19,
number = 2,
pages = {414--423},
keywords = {Diffusion,brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Dubois-CC08b.pdf} 
}


  5. M. Fouquet, B. Desgranges, B. Landeau, E. Duchesnay, F. Mézenge, V. de la Sayette, F. Viader, J.-C. Baron, F. Eustache, and G. Chételat. Longitudinal brain metabolic changes from amnestic Mild Cognitive Impairment to Alzheimer’s Disease. Brain, 132:2058-2067, 2009. Keyword(s): brainvisa, IFR49. 
    @article{fouquet09,
author = {M. Fouquet and B. Desgranges and B. Landeau and E. Duchesnay and F. Mézenge and V. de la Sayette and F. Viader and J.-C. Baron and F. Eustache and G. Chételat},
title = {Longitudinal brain metabolic changes from amnestic Mild Cognitive Impairment to Alzheimer’s Disease},
journal = {Brain},
year = 2009,
volume = 132,
pages = {2058--2067},
keywords = {brainvisa, IFR49} 
}


  6. S. Grimault, N. Robitaille, C. Grova, J.M. Lina, A.S. Dubarry, and P. Jolicœur. Oscillatory activity in parietal and dorsolateral prefrontal cortex during retention in visual short-term memory: Additive effects of spatial attention and memory load. 2009. Keyword(s): brainvisa, anatomy, meeg. 
    @article{Grimault09,
author = {Grimault, S. and Robitaille, N. and Grova, C. and Lina, J.M. and Dubarry, A.S. and Jolicœur, P.},
title = {Oscillatory activity in parietal and dorsolateral prefrontal cortex during retention in visual short-term memory: Additive effects of spatial attention and memory load},
year = 2009,
booktitle = {Hum Brain Mapp.},
keywords = {brainvisa, anatomy, meeg},
timestamp = {2009.05.12} 
}


  7. J. Penttilä, A. Cachia, J.-L. Martinot, D. Ringuenet, M. Wessa, J. Houenou, A. Galinowski, F. Bellivier, T. Gallarda, E. Duchesnay, E. Artiges, M. Leboyer, J.-P. Olié, J.-F. Mangin, and M.-L. Paillère-Martinot. Cortical folding difference between patients with early-onset and patients with intermediate-onset bipolar disorder. Bipolar Disorder, 11(4):361-70, 2009. Keyword(s): brainvisa, IFR49. 
    @article{penttila09,
author = {J. Penttilä and A. Cachia and J.-L. Martinot and D. Ringuenet and M. Wessa and J. Houenou and A. Galinowski and F. Bellivier and T. Gallarda and E. Duchesnay and E. Artiges and M. Leboyer and J.-P. Olié and J.-F. Mangin and M.-L. Paillère-Martinot},
title = {Cortical folding difference between patients with early-onset and patients with intermediate-onset bipolar disorder},
journal = {Bipolar Disorder},
year = 2009,
volume = 11,
number = 4,
pages = {361--70},
keywords = {brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Penttila-BP2009.pdf} 
}


  8. J. Penttilä, M-L Paillère-Martinot, J-L Martinot, D. Ringuenet, A. Galinowski, J. Houenou, F. Bellivier, M. Wessa, E. Artiges, T. Gallarda, P. Bruguière, F. Pinabel, M. Leboyer, J-P Olié, E. Duchesnay, J-F Mangin, and A. Cachia. Cortical folding in patients with bipolar disorder or unipolar depression. J Psychiatry Neurosci., 34(2):127-35, 2009. Keyword(s): brainvisa, IFR49. 
    @article{penttila09b,
author = {J. Penttilä and M-L Paillère-Martinot and J-L Martinot and D. Ringuenet and A. Galinowski and J. Houenou and F. Bellivier and M. Wessa and E. Artiges and T. Gallarda and P. Bruguière and F. Pinabel and M. Leboyer and J-P Olié and E. Duchesnay and J-F Mangin and A. Cachia},
title = {Cortical folding in patients with bipolar disorder or unipolar depression},
journal = {J Psychiatry Neurosci.},
year = 2009,
volume = 34,
number = 2,
pages = {127--35},
keywords = {brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Penttila-PsychiatryNeurosci09.pdf},
timestamp = {2009.01.06} 
}


Conference articles

  1. P. Ciuciu, S. Sockeel, T. Vincent, and J. Idier. Modelling the neurovascular habituation effect on fMRI time series. In 34th Proc. IEEE ICASSP, Taipei, Taiwan, pages 433-436, Apr. 2009. Keyword(s): brainvisa, IFR49. 
    @inproceedings{ciuciu09,
author = {P. Ciuciu and Sockeel, S. and T. Vincent and J. Idier},
title = {Modelling the neurovascular habituation effect on {fMRI} time series},
booktitle = { 34th {{P}roc. {IEEE} {I}CASSP}},
year = 2009,
pages = {433--436},
address = {Taipei, Taiwan},
month = {Apr.},
keywords = {brainvisa, IFR49} 
}


  2. L. Favre, A.-L. Fouque, T. Vincent, A. Tucholka, M. Keller, G. Operto, B. Thyreau, C. Clouchoux, L. Risser, A. Moreno, D. Geffroy, Y. Cointepas, O. Coulon, P. Ciuciu, B. Thirion, and A. Roche. A Comprehensive fMRI Processing Toolbox for BrainVISA. In Hum. Brain Mapp., 2009. Keyword(s): brainvisa, fMRI, IFR49. 
    @conference{favre09,
author = {Favre, L. and Fouque, A.-L. and Vincent, T. and Tucholka, A. and Keller, M. and Operto, G. and Thyreau, B. and Clouchoux, C. and Risser, L. and Moreno, A. and Geffroy, D. and Cointepas, Y. and Coulon, O. and Ciuciu, P. and Thirion, B. and Roche, A.},
title = {A Comprehensive fMRI Processing Toolbox for BrainVISA},
booktitle = {{{H}um. Brain {M}app.}},
year = 2009,
keywords = {brainvisa, fMRI, IFR49},
timestamp = {2009.07.10} 
}


  3. A.-L. Fouque, P. Ciuciu, and L. Risser. Multivariate spatial Gaussian mixture modeling for statistical clustering of hemodynamic parameters in functional MRI. In 34th Proc. IEEE ICASSP, Taipei, Taiwan, pages 445-448, Apr. 2009. Keyword(s): brainvisa, IFR49. 
    @inproceedings{fouque09,
author = {A.-L. Fouque and P. Ciuciu and L. Risser},
title = {Multivariate spatial {G}aussian mixture modeling for statistical clustering of hemodynamic parameters in functional {MRI}},
booktitle = { 34th {{P}roc. {IEEE} {I}CASSP}},
year = 2009,
pages = {445--448},
address = {Taipei, Taiwan},
month = {Apr.},
keywords = {brainvisa, IFR49} 
}


  4. L. Risser, J. Idier, and P. Ciuciu. Bilinear extrapolation scheme For Fast Estimation of 3D Ising Field Partition Function. Application to fMRI Time Course Analysis.. In 16th Proc. IEEE ICIP, Cairo, Egypt, pages 833-836, Nov. 2009. Keyword(s): brainvisa, IFR49. 
    @inproceedings{risser09,
author = {L. Risser and J. Idier and P. Ciuciu},
title = {Bilinear extrapolation scheme For Fast Estimation of {3D} Ising Field Partition Function. {A}pplication to f{MRI} Time Course Analysis.},
booktitle = { 16th {{P}roc. {IEEE} {I}CIP}},
year = 2009,
pages = {833--836},
address = {Cairo, Egypt},
month = {Nov.},
keywords = {brainvisa, IFR49} 
}


  5. L. Risser, T. Vincent, and P. Ciuciu. Schéma d'extrapolation de fonctions de partition de champs de Potts. Application à l'analyse d'images en IRMf. In Actes du 22$^{\mathrm{e}}$ colloque GRETSI, Dijon, France, Sep. 2009. Keyword(s): brainvisa, IFR49. 
    @inproceedings{risser09c,
author = {L. Risser and T. Vincent and P. Ciuciu},
title = {Schéma d'extrapolation de fonctions de partition de champs de Potts. Application à l'analyse d'images en {IRMf}},
booktitle = {{{A}ctes du }22{$^{\mathrm{e}}$ colloque {GRETSI}}},
year = 2009,
address = {Dijon, France},
month = {Sep.},
keywords = {brainvisa, IFR49} 
}


  6. D. Rivière, D. Geffroy, I. Denghien, N. Souedet, and Y. Cointepas. BrainVISA: an extensible software environment for sharing multimodal neuroimaging data and processing tools. In Proc. 15th HBM, 2009. Keyword(s): brainvisa, IFR49. 
    @conference{riviere09,
author = {Rivière, D. and Geffroy, D. and Denghien, I. and Souedet, N. and Cointepas, Y.},
title = {{BrainVISA}: an extensible software environment for sharing multimodal neuroimaging data and processing tools},
booktitle = {{P}roc. 15th {{HBM}}},
year = 2009,
keywords = {brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/anatomist/papers/Riviere-HBM09.pdf},
timestamp = {2009.07.10} 
}


  7. T. Vincent, L. Risser, P. Ciuciu, and J. Idier. Spatially unsupervised analysis of within-subject fMRI data using multiple extrapolations of 3D Ising field partition functions. In 2009 IEEE international workshop on Machine Learning for Signal Processing, Grenoble, France, Sep. 2009. Keyword(s): brainvisa, IFR49. 
    @inproceedings{vincent09b,
author = {T. Vincent and L. Risser and P. Ciuciu and J. Idier},
title = {Spatially unsupervised analysis of within-subject {fMRI} data using multiple extrapolations of {3D Ising} field partition functions},
booktitle = {{2009 IEEE international workshop on Machine Learning for Signal Processing}},
year = 2009,
address = {Grenoble, France},
month = {Sep.},
keywords = {brainvisa, IFR49},
pdf = {ftp://ftp.cea.fr/pub/dsv/madic/publis/Vincent09-MLSP.pdf} 
}


  8. T. Vincent, L. Risser, J. Idier, and P. Ciuciu. Spatially adaptive mixture modelling for analysis of fMRI time series. In Proc. 15th HBM, San Francisco, CA, USA, June 2009. Keyword(s): brainvisa, IFR49. 
    @inproceedings{vincent09,
author = {T. Vincent and L. Risser and J. Idier and P. Ciuciu},
title = {Spatially adaptive mixture modelling for analysis of {fMRI} time series},
booktitle = {{P}roc. 15th {{HBM}}},
year = 2009,
address = {San Francisco, CA, USA},
month = {June},
keywords = {brainvisa, IFR49} 
}



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