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Publications of D. Rivière

Thesis

  1. D. Rivière. Apprentissage de la variabilité inter-individuelle de l'anatomie corticale cérébrale pour la reconnaissance automatique des sillons. PhD thesis, Université d'évry Val d'Essonne, Évry, France, Sep. 2000. Keyword(s): Sulci, Computer Science. [bibtex-entry]


Articles in journal or book chapters

  1. A. Cachia, G. Borsta, C. Tissiera, C. Fischer, M. Plaze, O. Gay, D. Rivière, N. Gogtay, J. Giedd, J.-F. Mangin, O. Houdé, and A. Raznahang. Longitudinal stability of the folding pattern of the anterior cingulate cortex during development. Developmental Cognitive Neuroscience, 19:122-127, June 2016. [bibtex-entry]


  2. S. Lefranc, P. Roca, M. Perrot, C. Poupon, D. Le Bihan, J.-F. Mangin, and D. Rivière. Groupwise connectivity-based parcellation of the whole human cortical surface using watershed-driven dimension reduction. Medical Image Analysis, 30:11-29, 2016. Keyword(s): brainvisa, lnao. [bibtex-entry]


  3. G. Operto, M. Chupin, B. Batrancourt, M.O. Habert, O. Colliot, H. Benali, C. Poupon, C. Champseix, C. Delmaire, S. Marie, D. Rivière, M. Pelegrini-Issac, V. Perlbarg, R. Trebossen, M. Bottlaender, V. Frouin, A. Grigis, D. Papadopoulos Orfanos, H. Dary, L. Fillon, C. Azouani, A. Bouyahia, C. Fischer, L. Edward, M. Bouin, U. Thoprakarn, J. Li, L. Makkaoui, S. Poret, C. Dufouil, V. Bouteloup, G. Chételat, B. Dubois, S. Lehéricy, J.-F. Mangin, and Y. Cointepas. CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts. Neuroinformatics, 2016. [bibtex-entry]


  4. J.-F. Mangin, G. Auzias, O. Coulon, Z. Y. Sun, D. Rivière, and J. Régis. Sulci as landmarks. Brain mapping: an encyclopedic reference, 2:45-52, 2015. [bibtex-entry]


  5. J.-F. Mangin, M. Perrot, G. Operto, A. Cachia, C. Fischer, J. Lefèvre, D. Rivière, and CEA Neurospin. Sulcus identification and labelling. Brain mapping: an encyclopedic reference, 1:365-371, 2015. [bibtex-entry]


  6. P. Roca, C. Mellerio, F. Chassoux, D. Rivière, A. Cachia, S. Charron, S. Lion, J.-F. Mangin, B. Devaux, J.-F. Meder, and others. Sulcus-Based MR Analysis of Focal Cortical Dysplasia Located in the Central Region. PloS one, 10(3):e0122252, 2015. [bibtex-entry]


  7. Z. Y. Sun, P. Pinel, D. Rivière, A. Moreno, S. Dehaene, and J.-F. Mangin. Linking morphological and functional variability in hand movement and silent reading. Brain Structure and Function, pp 1-11, 2015. [bibtex-entry]


  8. F. De Guio, J.-F. Mangin, D. Rivière, M. Perrot, C. D. Molteno, S. W. Jacobson, E. M. Meintjes, and J. L. Jacobson. A study of cortical morphology in children with fetal alcohol spectrum disorders. Hum. Brain Mapp., 35(5):2285-2296, 2014. Keyword(s): brainvisa, Sulci. [bibtex-entry]


  9. M. Fouquet, B. Desgranges, R La Joie, D. Rivière, J.-F. Mangin, B. Landeau, F. Mézenge, A. Pélerin, V. de la Sayette, F. Viader, J. C. Baron, F. Eustache, and G. Chételat. Role of hippocampal CA1 atrophy in memory encoding deficits in amnestic Mild Cofbitive Impairment. Neuroimage, 59(4):3309-15, 2012. [bibtex-entry]


  10. G. Operto, D. Rivière, B. Fertil, R. Bulot, J.-F. Mangin, and O. Coulon. Structural Analysis of fMRI data: a surface-based framework for multi-subject studies. Medical Image Analysis, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  11. Z. Y. Sun, S. Klöppel, D. Rivière, M. Perrot, R. Frackowiak, H. Siebner, and J.-F. Mangin. The effect of handedness on the shape of the central sulcus. Neuroimage, 60(1):332-9, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  12. M. Fouquet, B. Desgranges, R. La Joie, D. Rivière, B. Landeau, F. Mézenge, V. de La Sayette, F. Viader, J.-F. Mangin, J.-C. Baron, and others. A specific relationship between hippocampal CA1 subfield atrophy and episodic memory encoding in amnestic mild cognitive impairment. Alzheimer's & Dementia, 7(4):S734-S735, 2011. [bibtex-entry]


  13. P. Guevara, C. Poupon, D. Rivière, Y. Cointepas, M. Descoteaux, B. Thirion, and J.-F. Mangin. Robust clustering of massive tractography datasets.. Neuroimage, 54(3):1975-1993, 2011. [bibtex-entry]


  14. M. Perrot, D. Rivière, and J.-F. Mangin. Cortical sulci recognition and spatial normalization. Medical Image Analysis, 15(4):529-550, 2011. Keyword(s): sulci, SPAM, brainvisa. [bibtex-entry]


  15. J. Régis, M. Tamura, M. Park, A. McGonigal, D. Rivière, O. Coulon, F. Bartolomei, N. Girard, D. Figarella-Branger, P. Chauvel, and J.-F. Mangin. Subclinical abnormal gyration pattern, a potential anatomic marker of epileptogenic zone in patients with MRI–negative frontal lobe epilepsy. Neurosurgery, 69(1):80-94, 2011. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  16. C. Clouchoux, D. Rivière, J.-F. Mangin, G. Operto, J. Régis, and O. Coulon. Model-driven parameterization of the cortical surface for localization and inter-subject matching. Neuroimage, 50(2):552-66, 2010. [bibtex-entry]


  17. M.-L. Paillère Martinot, A. Galinowski, D. Ringuenet, T. Gallarda, J.P. Lefaucheur, F. Bellivier, C. Picq, P. Bruguière, J.-F. Mangin, D. Rivière, J.C. Willer, B. Falissard, M. Leboyer, J.P. Olié, E. Artiges, and J.L. Martinot. Influence of prefrontal target region on the efficacy of repetitive transcranial magnetic stimulation in patients with medication-resistant depression: a [18F]-fluorodeoxyglucose PET and MRI study. Int J Neuropsychopharmacol, 13(1):45-59, 2010. [bibtex-entry]


  18. J. Andoh, D. Rivière, J-F. Mangin, E. Artiges, Y. Cointepas, M-L. Paillère-Martinot, J-L. Martinot, and A. Cachia. A low-cost MRI-guided method for TMS coil positioning. Brain Stimulation, 2:123-131, 2009. Keyword(s): brainvisa. [bibtex-entry]


  19. J. Andoh, E Artiges, C Pallier, D. Rivière, J.-F. Mangin, M. L. Paillère-Martinot, and J.-L. Martinot. Priming frequencies of transcranial magnetic stimulation over Wernicke's area modulate word detection. Cereb. Cortex, 18(1):210-6, 2008. Keyword(s): brainvisa. [bibtex-entry]


  20. A. Cachia, M.-L. Paillère-Martinot, A. Galinowski, D. Januel, R. De Beaurepaire, F. Bellivier, E. Artiges, T. Gallarda, J. Andoh, D. Bartrés-Faz, E. Duchesnay, D. Rivière, Y. Cointepas, M. Plaze, J.-F. Mangin, and J.-L. Martinot. Cortical folding abnormalities in schizophrenia patients with resistant auditory hallucinations. Neuroimage, 39(3):927-935, 2008. Keyword(s): Sulci, Anatomy, brainvisa. [bibtex-entry]


  21. M. D. Cykowski, P Kochunov, R. J. Ingham, J. C. Ingham, J.-F. Mangin, D. Rivière, J. L. Lancaster, and P. T. Fox. Perisylvian Sulcal Morphology and Cerebral Asymmetry Patterns in Adults Who Stutter. Cereb. Cortex, 18(3):571-83, 2008. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  22. P. Kochunov, P.M. Thompson, T.R. Coyle, J. L. Lancaster, V. Kochunov, D.R. Royall, J.-F. Mangin, D. Rivière, and P. T. Fox. Relationship among neuroimaging indices of cerebral health during normal aging. Hum. Brain Mapp., 29(1):36-45, 2008. Keyword(s): Sulci, Diffusion, brainvisa. [bibtex-entry]


  23. M. Perrin, Y. Cointepas, A. Cachia, C. Poupon, B. Thirion, D. Rivière, P. Cathier, V. El Kouby, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Connectivity-Based Parcellation of the Cortical Mantle Using q-Ball Diffusion Imaging. Int J Biomed Imaging, 2008. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  24. E. Duchesnay, A. Cachia, A. Roche, D. Rivière, Y. Cointepas, D. Papadopoulos-Orfanos, M. Zilbovicius, J.-L. Martinot, and J.-F. Mangin. Classification from cortical folding patterns. IEEE Trans. Med. Imag., 26(4):553-565, 2007. Keyword(s): Classification, Sulci, Anatomy, brainvisa. [bibtex-entry]


  25. J Andoh, E Artiges, Ch. Pallier, D. Rivière, J.-F. Mangin, A. Cachia, M Plaze, M-L Paillère-Martinot, and J.-L. Martinot. Modulation of language areas with functional MR image-guided magnetic stimulation. Neuroimage, 29(2):619-627, 2006. [bibtex-entry]


  26. T.R. Coyle, P. Kochunov, R. D. Patel, F. G. Nery, J. L. Lancaster, J.-F. Mangin, D. Rivière, D.R. Pillow, G.J. Davis, M.A. Nicoletti, E. Serap Monkul, P. T. Fox, and J.C. Soares. Cortical sulci and bipolar disorder. Neuroreport, 17(16):1739-42, 2006. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  27. P. Kochunov, J.-F. Mangin, T.R. Coyle, J. L. Lancaster, P.M. Thompson, D. Rivière, Y. Cointepas, J. Régis, A. Schlosser, D.R. Royall, K. Zilles, J. Mazziotta, A.W. Toga, and P. T. Fox. Age-related morphology trends of cortical sulci. Hum Brain Mapp., 26(3):210-220, 2005. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  28. J. Régis, J.-F. Mangin, T. Ochiai, V. Frouin, D. Rivière, A. Cachia, M. Tamura, and Y. Samson. Sulcal root generic model: a hypothesis to overcome the variability of the human cortex folding patterns. Neurol Med Chir (Tokyo), 45:1-17, 2005. [bibtex-entry]


  29. J.-F. Mangin, F. Poupon, E. Duchesnay, D. Rivière, A. Cachia, D. L. Collins, A. C. Evans, and J. Régis. Brain Morphometry using 3D Moment Invariants. Medical Image Analysis, 8:187-196, 2004. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  30. J.-F. Mangin, D. Rivière, A. Cachia, E. Duchesnay, Y. Cointepas, D. Papadopoulos-Orfanos, D. L. Collins, A. C. Evans, and J. Régis. Object-based morphometry of the cerebral cortex. IEEE Trans. Med. Imag., 23(8):968-982, Aug. 2004. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  31. J.-F. Mangin, D. Rivière, A. Cachia, E. Duchesnay, Y. Cointepas, D. Papadopoulos-Orfanos, P. Scifo, T. Ochiai, F. Brunelle, and J. Régis. A framework to study the cortical folding patterns. Neuroimage, 23:S129-S138, 2004. Keyword(s): Sulci, Anatomy, brainvisa. [bibtex-entry]


  32. J.-F. Mangin, D. Rivière, A. Cachia, E. Duchesnay, Y. Cointepas, C. Poupon, D. Papadopoulos-Orfanos, F. Brunelle, and J. Régis. Vers une signature de chaque maladie neurologique. Biofutur, 246:30-33, 2004. [bibtex-entry]


  33. J.-F. Mangin, D. Rivière, O. Coulon, C. Poupon, A. Cachia, Y. Cointepas, J.-B. Poline, D. Le Bihan, J. Régis, and D. Papadopoulos-Orfanos. Coordinate-based versus structural approaches to brain image analysis. Artificial Intelligence in Medicine, 30:177-197, 2004. Keyword(s): Sulci, Diffusion, Scalespace, Anatomy, brainvisa. [bibtex-entry]


  34. N. Molko, A. Cachia, D. Rivière, J.-F. Mangin, M Bruandet, D. Le Bihan, L. Cohen, and S. Dehaene. Brain Anatomy in Turner Syndrome: Evidence for Impaired Social and Spatial-Numerical Networks. Cereb Cortex., 14(8):840-850, 2004. [bibtex-entry]


  35. T. Ochiai, S. Grimault, D. Scavarda, G. Roch, T. Hori, D. Rivière, J.-F. Mangin, and J. Régis. Sulcal pattern and morphology of the superior temporal sulcus. Neuroimage, 22(2):706-719, 2004. Keyword(s): brainvisa. [bibtex-entry]


  36. O. Simon, F. Kherif, G. Flandin, J.-B. Poline, D. Rivière, J.-F. Mangin, D. Le Bihan, and S. Dehaene. Automatized clustering and functional geometry of human parietofrontal networks for language, space, and number.. Neuroimage, 23(3):1192-1202, 11 2004. [bibtex-entry]


  37. A. Cachia, J.-F. Mangin, D. Rivière, F. Kherif, N. Boddaert, A. Andrade, D. Papadopoulos-Orfanos, J.-B. Poline, I. Bloch, M. Zilbovicius, P. Sonigo, F. Brunelle, and J. Régis. A Primal Sketch of the Cortex Mean Curvature: a Morphogenesis Based Approach to Study the Variability of the Folding Patterns. IEEE Trans. Med. Imag., 22(6):754-765, 2003. Keyword(s): Sulci, ScaleSpace. [bibtex-entry]


  38. A. Cachia, J.-F. Mangin, D. Rivière, D. Papadopoulos-Orfanos, F. Kherif, I. Bloch, and J. Régis. A generic framework for parcellation of the cortical surface into gyri using geodesic Voronoi diagrams. Medical Image Analysis, 7(4):403-416, 2003. Keyword(s): Sulci, Segmentation, brainvisa. [bibtex-entry]


  39. N. Molko, A. Cachia, D. Rivière, J.-F. Mangin, M Bruandet, D. Le Bihan, L. Cohen, and S. Dehaene. Functional and structural alterations of the intraparietal sulcus in a developmental dyscalculia of genetic origin. Neuron, 40:847-858, November 2003. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  40. J.-F. Mangin, C. Poupon, Y. Cointepas, D. Rivière, D. Papadopoulos-Orfanos, C. A. Clark, J. Régis, and D. Le Bihan. A framework based on spin glass models for the inference of anatomical connectivity from diffusion-weighted MR data. NMR in Biomedicine, 15:481-492, 2002. Keyword(s): Diffusion. [bibtex-entry]


  41. D. Rivière, J.-F. Mangin, D. Papadopoulos-Orfanos, J.-M. Martinez, V. Frouin, and J. Régis. Automatic recognition of cortical sulci of the Human Brain using a congregation of neural networks. Medical Image Analysis, 6(2):77-92, 2002. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  42. S. Dehaene, L. Naccache, L. Cohen, D. Le Bihan, J.-F. Mangin, J.-B. Poline, and D. Rivière. Cerebral mechanisms of word masking and unconscious repetition priming. Nat. Neurosci., 4(7):752-758, 2001. Keyword(s): UNAF, U562. [bibtex-entry]


  43. P. Pinel, S. Dehaene, D. Rivière, and D. Le Bihan. Modulation of parietal activation by semantic distance in a number comparison task. Neuroimage, 14(5):1013-1026, 2001. [bibtex-entry]


  44. J.-F. Mangin, J. Régis, J.-B. Poline, D. Rivière, C. Poupon, F. Poupon, D. Papadopoulos-Orfanos, F. Delaye, O. Pizzato, O. Coulon, S. Crozier, P. Belin, P. Remy, M. Zilbovicius, C. A. Clark, D. Le Bihan, D. Hasboun, S. Lehéricy, D. Dormont, O. de Dreuille, H. Foehrenbach, J.-F. Gaillard, I. Bloch, Y. Samson, and V. Frouin. Place de l'anatomie dans la cartographie fonctionnelle du cerveau. Annales de l'Institut Pasteur. Actualités. La neuro-imagerie, 9(3):243-258, 1998. Keyword(s): Sulci, Diffusion. [bibtex-entry]


Conference articles

  1. S. Lefranc, Z. Y. Sun, P. Roca, C. Poupon, D. Le Bihan, J.-F. Mangin, and D. Rivière. Concomitant variability of the central sulcus morphology and adjacent patterns. In Proc. Proc. IEEE ISBI, 2015. Keyword(s): brainvisa, lnao. [bibtex-entry]


  2. Y. Leprince, F. Poupon, T. Delzescaux, D. Hasboun, C. Poupon, and D. Rivière. Combined Laplacian-equivolumic model for studying cortical lamination with ultra high field MRI (7T). In Proc. Proc. IEEE ISBI, 2015. Keyword(s): lnao. [bibtex-entry]


  3. Y. Leprince, B. Schmitt, E. Chaillou, C. Destrieux, L. Barantin, A. Vignaud, D. Rivière, and C. Poupon. Optimization of sample preparation for MRI of formaldehyde-fixed brains. In Proc. ISMRM, 2015. Keyword(s): lnao. [bibtex-entry]


  4. S. Lefranc, P. Roca, M. Perrot, D. Duclap, C. Poupon, D. Le Bihan, J.-F. Mangin, and D. Rivière. Inter-subject connectivity-based parcellation of the whole human cortical surface. In Proc. 20th HBM, 2014. Keyword(s): brainvisa, lnao. [bibtex-entry]


  5. S. Lefranc, P. Roca, M. Perrot, C. Poupon, O. Coulon, D. Le Bihan, L. Hertz-Pannier, J.-F. Mangin, and D. Rivière. Validation of consistent inter-subject connectivity-based parcellation. In Proc. Proc. IEEE ISBI, 2014. Keyword(s): brainvisa, lnao. [bibtex-entry]


  6. Y. Leprince, C. Fischer, J.-F. Mangin, B. Larrat, S. Mériaux, C. Poupon, I. Reillo, V. Borrell, O. Foubet, R. Toro, and D. Rivière. Architectonics-informed partition of the cortex at sub-millimetre resolution. In Proc. 20th HBM, 2014. Keyword(s): lnao. [bibtex-entry]


  7. B. Schmitt, D. Duclap, A. Lebois, P. Guevara, H. Zhang, Y. Assaf, F. Poupon, D. Rivière, Y. Cointepas, D. Le Bihan, J.-F. Mangin, and C. Poupon. A novel probabilistic connectivity atlas for the human connectome: the CONNECT/ARCHI atlas. In Proc. ISMRM, volume 21, pages 3155, 2013. Keyword(s): lnao. [bibtex-entry]


  8. C. Fischer, G. Operto, S. Laguitton, M. Perrot, I. Denghien, D. Rivière, and J.-F. Mangin. Morphologist 2012: the new morphological pipeline of BrainVISA. In Proc. HBM, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  9. J. Lefèvre, D. Germanaud, C. Fischer, R. Toro, D. Rivière, and O. Coulon. Fast surface-based measurements using first eigenfunction of the Laplace-Beltrami Operator: Interest for sulcal description. In Proc. 9th Proc. IEEE ISBI, pages 1527-1530, 2012. Keyword(s): lnao. [bibtex-entry]


  10. G. Operto, G. Auzias, A. Le Troter, M. Perrot, D. Rivière, J. Dubois, P. S. Hüppi, O. Coulon, and J.-F. Mangin. Structural group analysis of cortical curvature and depth patterns in the developing brain. In Proc. 9th Proc. IEEE ISBI, pages 422-425, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  11. M. Audette, D. Rivière, M. Ewend, A. Enquobahrie, and S. Valette. Approach-guided controlled resolution brain meshing for fe-based interactive neurosurgery simulation. In Workshop on Mesh Processing in Medical Image Analysis, in conjunction with MICCAI 2011, pages 176-186, 2011. [bibtex-entry]


  12. M. Audette, D. Rivière, C. Law, L. Ibanez, S. R. Aylward, J. Finet, X. Wu, and M. G. Ewend. Approach-specific multi-grid anatomical modeling for neurosurgery simulation with public-domain and open-source software. In SPIE Medical Imaging, pages 79642J-79642J, 2011. International Society for Optics and Photonics. [bibtex-entry]


  13. D. Geffroy, D. Rivière, I. Denghien, N. Souedet, S. Laguitton, and Y. Cointepas. BrainVISA: a complete software platform for neuroimaging. In Python in Neuroscience workshop, Paris, Aug. 2011. Keyword(s): brainvisa. [bibtex-entry]


  14. P. Guevara, D. Duclap, L. Marrakchi-Kacem, D. Rivière, Y. Cointepas, C. Poupon, and F.-F. Mangin. Accurate tractography propagation mask using T1-weighted data rather than FA. In Proc. Intl. Soc. Mag. Reson. Med, volume 19, pages 2011, 2011. [bibtex-entry]


  15. S. Laguitton, D. Rivière, D. Geffroy, N. Souedet, and Y. Cointepas. Soma-Workflow: open source software for easy access to parallel computing resources. In Proc. 17th HBM, 2011. Keyword(s): parallel computing, brainvisa. [bibtex-entry]


  16. S. Laguitton, D. Rivière, T. Vincent, C. Fischer, D. Geffroy, N. Souedet, I. Denghien, and Y. Cointepas. Soma-workflow: a unified and simple interface to parallel computing resources. In Python in Neuroscience workshop, Paris, Aug. 2011. Keyword(s): parallel computing, brainvisa. [bibtex-entry]


  17. S. Laguitton, D. Rivière, T. Vincent, C. Fischer, D. Geffroy, N. Souedet, I. Denghien, and Y. Cointepas. Soma-workflow: a unified and simple interface to parallel computing resources. In MICCAI Workshop on High Performance and Distributed Computing for Medical Imaging, Toronto, Sep. 2011. Keyword(s): parallel computing, brainvisa. [bibtex-entry]


  18. D. Rivière, B. Bernhardt, H. Kim, S.-J. Hong, M. Perrot, J.-F. Mangin, J. Régis, N. Bernasconi, and A. Bernasconi. Focal epileptogenic malformations of cortical development are associated with diffuse sulcal anomalies. In Proc. 17th HBM, 2011. Keyword(s): brainvisa, Sulci, Anatomy. [bibtex-entry]


  19. D. Rivière, D. Geffroy, I. Denghien, N. Souedet, and Y. Cointepas. Anatomist: a python framework for interactive 3D visualization of neuroimaging data. In Python in Neuroscience workshop, 2011. Keyword(s): brainvisa. [bibtex-entry]


  20. Y. Cointepas, D. Geffroy, N. Souedet, I. Denghien, and D. Rivière. The BrainVISA project: a shared software development infrastructure for biomedical imaging research. In Proc. 16th HBM, 2010. Keyword(s): brainvisa. [bibtex-entry]


  21. P. Guevara, C. Poupon, D. Rivière, Y. Cointepas, L. Marrakchi, M. Descoteaux, P. Fillard, B. Thirion, and J.-F. Mangin. Inference of a HARDI fiber bundle atlas using a two-level clustering strategy.. In MICCAI, volume 13, pages 550-557, 2010. [bibtex-entry]


  22. P. Roca, A. Tucholka, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. Inter-subject Connectivity-based Parcellation of a Patch of Cerebral Cortex. In MICCAI 2010, LNCS 5762, Springer-Verlag, 2010. Keyword(s): brainvisa. [bibtex-entry]


  23. P. Roca, A. Tucholka, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. Inter-subject Connectivity-based Parcellation of the Human Post-central Gyrus. In Proc. 16th HBM, 2010. Keyword(s): brainvisa. [bibtex-entry]


  24. P. Guevara, Y. Cointepas, D. Rivière, C. Poupon, B. Thirion, and J.-F. Mangin. Inference of a fiber bundle atlas using a two-level clustering strategy. In MICCAI 2009 Workshop on Diffusion Modelling, 2009. [bibtex-entry]


  25. M. Perrot, D. Rivière, A. Tucholka, and J.-F. Mangin. Joint Bayesian Cortical Sulci Recognition and Spatial Normalization. In Proc. 21th IPMI, LNCS-5636, Williamsburg, VA, pages 176-187, July 2009. Springer Verlag. [bibtex-entry]


  26. D. Rivière, D. Geffroy, I. Denghien, N. Souedet, and Y. Cointepas. BrainVISA: an extensible software environment for sharing multimodal neuroimaging data and processing tools. In Proc. 15th HBM, 2009. Keyword(s): brainvisa. [bibtex-entry]


  27. P. Roca, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. DWI-based parcellation of the human cortex with a new dimension reduction of the connectivity matrix. In Proc. 15th HBM, 2009. Keyword(s): brainvisa. [bibtex-entry]


  28. P. Roca, D. Rivière, P. Guevara, C. Poupon, and J.-F. Mangin. Tractography-Based Parcellation of the Cortex using a Spatially-Informed Dimension Reduction of the Connectivity Matrix. In MICCAI 2009, LNCS 5762, Springer-Verlag, 2009. [bibtex-entry]


  29. Z. Y. Sun, M. Perrot, A. Tucholka, D. Rivière, and J.-F. Mangin. Constructing a Dictionary of Human Brain Folding Patterns. In MICCAI 2009, Part II, LNCS 5762, Springer-Verlag, pages 117-124, 2009. [bibtex-entry]


  30. A. Dubois, J. Dauguet, N. Souedet, A. S. Hérard, D. Rivière, Y. Cointepas, G. Bonvento, P. Hantraye, and T. Delzescaux. BrainRAT: Brain Reconstruction and Analysis Toolbox. a freely available toolbox for the 3D reconstruction of anatomo-functional brain sections in rodents. In 38th annual meeting of the Society for Neuroscience, Washington, 2008. Keyword(s): brainvisa. [bibtex-entry]


  31. P. Guevara, M. Perrin, P. Cathier, Y. Cointepas, D. Rivière, C. Poupon, and J.-F. Mangin. Connectivity-based parcellation of the cortical surface using Q-ball imaging. In 5th Proc. IEEE ISBI, Paris, France, pages 903-906, May 2008. [bibtex-entry]


  32. M. Perrot, D. Rivière, and J.-F. Mangin. Identifying cortical sulci from localizations, shape and local organization. In 5th Proc. IEEE ISBI, Paris, France, pages 420-423, May 2008. [bibtex-entry]


  33. Z. Y. Sun, D. Rivière, and E. Duchesnay, B. Thirion, F. Poupon, and J.-F. Mangin. Defining cortical sulcus patterns using partial clustering based on bootstrap and bagging. In 5th Proc. IEEE ISBI, Paris, France, pages 1629-1632, May 2008. Keyword(s): brainvisa. [bibtex-entry]


  34. P. Kochunov, J. Rogers, D. C. Glahn, J. L. Lancaster, O. Coulon, J.-F. Mangin, D. Rivière, J. Blangero, and P. T. Fox. Genetic analysis of cerebral volume and cortical sulci in baboons. In Hum. Brain Mapp., Chicago, USA, 2007. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  35. Z. Y. Sun, D. Rivière, F. Poupon, J. Régis, and J.-F. Mangin. Automatic inference of sulcus patterns using 3D moment invariants. In 10th Proc. MICCAI, LNCS Springer Verlag, pages 515-22, 2007. Keyword(s): brainvisa. [bibtex-entry]


  36. A. Barbot, D. P. Schwartz, K. N'Diaye, A. Bellio, J. Mattout, M. Pélégrini-Issac, Y. Cointepas, D. Rivière, and A. Ducorps. A MEG/EEG analysis toolbox for BrainVISA. In Hum. Brain Mapp., Florence, 2006. Keyword(s): brainvisa, meeg. [bibtex-entry]


  37. C. Clouchoux, O. Coulon, G. Operto, D. Rivière, K. Dauchot, A. Sirigu, and J.L. Anton. Cortical localization via hemisphere surface parameterization. In Human Brain Mapping, Florence, Italy, 2006. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  38. M. Perrin, C. Poupon, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Q-ball imaging simulation with a numerical diffusion fiber crossing phantom. In 12th HBM Neuroimage, number 1164, Florence, Italie, 2006. Keyword(s): brainvisa. [bibtex-entry]


  39. A. Cachia, E. Duchesnay, M Plaze, M-L Paillère-Martinot, D Januel, F Bellivier, A Galinowski, J Andoh, D Bartrés-Faz, R De Beaurepaire, E Artiges, D. Rivière, J.-F. Mangin, and J.-L. Martinot. Sulcus-based morphometry of heteromodal cortex in schizophrenia patients with resistant auditory hallucinations.. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  40. C. Clouchoux, O. Coulon, D. Rivière, A. Cachia, J.-F. Mangin, and J. Régis. Anatomically constrained surface parameterization for cortical localization. In MICCAI'05, pages 344-351, 2005. Keyword(s): Sulci, LongConfPaper, brainvisa, cortical_surface. [bibtex-entry]


  41. V. El Kouby, Y. Cointepas, C. Poupon, D. Rivière, N. Golestani, J.-B. Poline, D. Le Bihan, and J.-F. Mangin. MR Diffusion-Based Inference of a Fiber Bundle Model from a Population of Subjects. In MICCAI'05, pages 196-204, 2005. Keyword(s): Diffusion, LongConfPaper, brainvisa. [bibtex-entry]


  42. P. Kochunov, D. Rivière, J. L. Lancaster, J.-F. Mangin, Y. Cointepas, D. Papadopoulos-Orfanos, D. C. Glahn, P. T. Fox, and J. Rogers. Development of high-resolution MRI imaging and image processing for live and post-mortem primates (Papio hamadryas). In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  43. R. Patel, P. Kochunov, J. L. Lancaster, J.-F. Mangin, D. Rivière, Y. Cointepas, M. Nicoletti, S. Monkul, P. Najt, S. Kaur, D. C. Glahn, C. Bowder, P. T. Fox, and J. Soares. Comparison of age-related sulcal opening trends between bipolar II patients and normal individuals. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  44. M. Perrin, Y. Cointepas, C. Poupon, B. Rieul, N. Golestani, C. Pallier, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Regularized probabilistic tracking with Q-ball fields. In ISMRM Workshop on Methods for Quantitative Diffusion MRI of Human Brain, Lake Louise, Canada, 2005. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  45. M. Perrin, Y. Cointepas, C. Poupon, B. Rieul, N. Golestani, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Fiber tracking in Q-ball fields using regularized particle trajectories. In Inf Process Med Imaging, volume 19, pages 52-63, 2005. Keyword(s): Diffusion, LongConfPaper, brainvisa. [bibtex-entry]


  46. D. Ringuenet, M.-L. Paillère-Martinot, D. Bartrés-Faz, A. Galinowski, F. Bellivier, T. Gallarda, J.-P. Lefaucheur, D. Rivière, J.-B. Leprovost, A. Cachia, J.-F. Mangin, J.-L. Martinot, and E. Artiges. Cingulate cortex and resistant depression : 3D sulci measurment and voxel-based morphometry abnormalities.. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  47. C. Clouchoux, O. Coulon, A. Cachia, D. Rivière, J.-F. Mangin, and J. Régis. Towards an anatomically meaningful parameterization of the cortical surface. In MICCAI, volume 3216 of Lecture Notes in Computer Science, St-Malo, France, pages 1046-1047, 2004. Springer-Verlag. Keyword(s): brainvisa. [bibtex-entry]


  48. E. Duchesnay, A. Roche, D. Rivière, D. Papadopoulos-Orfanos, Y. Cointepas, and J.-F. Mangin. Guessing the Sex from the Shapes of Cortical Folds. In HBM, Budapest, pages 164, 2004. [bibtex-entry]


  49. E. Duchesnay, A. Roche, D. Rivière, D. Papadopoulos-Orfanos, Y. Cointepas, and J.-F. Mangin. Population Classification Based on Structural Morphometry of Cortical Sulci. In Proc. 2th Proc. IEEE ISBI, Arlington, VA, USA, pages 1276-1279, Apr. 2004. [bibtex-entry]


  50. J. L. Lancaster, P. Kochunov, J.-F. Mangin, D. Rivière, Y. Cointepas, J. Régis, and P. T. Fox. Age-related opening of cortical sulci. In HBM, Budapest, pages MO 319, 2004. [bibtex-entry]


  51. D. Ringuenet, M.-L. Paillère-Martinot, D. Bartrés-Faz, A. Galinowski, F. Bellivier, T. Gallarda, J.-P. Lefaucheur, D. Rivière, Leprovost J.-B., A. Cachia, J.-F. Mangin, J.-L. Martinot, and E. Artiges. Cingulate cortex and resistant depression : MRI 3D morphometric abnormalities. In CINP, Paris, France, 2004. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  52. D. P. Schwartz, K. N'Diaye, A. Bellio, J. Mattout, M. Pélégrini-Issac, Y. Cointepas, D. Rivière, and A. Ducorps. A MEG/EEG analysis toolbox for BrainVISA. In Hum. Brain Mapp., Budapest, Hungary, 2004. Keyword(s): brainvisa, meeg. [bibtex-entry]


  53. D. Bartrés-Faz, D. Rivière, J.-B. Leprovost, M.-L. Paillère-Martinot, Y. Cointepas, J.-F. Mangin, M. Leboyer, T. Gallarda, C. Recasens, E. Artiges, and J.-L. Martinot. Asymmetry in 3D temporal sulci measured by automatic recognition in schizophrenia. In Proc. 9th HBM, Neuroimage vol 19 (2), pages 574, 2003. [bibtex-entry]


  54. A. Cachia, D. Rivière, Y. Cointepas, S. Robbins, I. Bloch, J. Régis, A. Evans, D.L. Collins, and J.-F. Mangin. Towards 2D morphometry of the cortical surface. In Proc. 9th HBM CD-Rom Neuroimage vol 19 (2), New York,, June19--22 2003. [bibtex-entry]


  55. Y. Cointepas, C. Poupon, R. Maroy, D. Rivière, D. Le Bihan, and J.-F. Mangin. A freely available Anatomist/BrainVISA package for analysis of diffusion MR images. In Proc. 9th HBM CD-Rom Neuroimage vol 19 (2), New York,, June19--22 2003. Keyword(s): brainvisa. [bibtex-entry]


  56. J.-F. Mangin, F. Poupon, D. Rivière, D. L. Collins, A. C. Evans, and J. Régis. 3D Moment Invariant Based Morphometry. In MICCAI, Montreal, LNCS 2879, Springer-Verlag, pages 505-512, 2003. Keyword(s): Sulci, LongConfPaper. [bibtex-entry]


  57. J.-F. Mangin, D. Rivière, A. Cachia, D. Papadopoulos-Orfanos, D. L. Collins, A. C. Evans, and J. Régis. Object-based strategy for morphometry of the cerebral cortex. In IPMI, Ambleside, UK, LNCS 2732, Springer Verlag, pages 160-171, 2003. Keyword(s): Sulci, Anatomy, LongConfPaper. [bibtex-entry]


  58. J.-F. Mangin, J. Régis, D. Rivière, Y. Cointepas, T. Ochiai, D. Papadopoulos-Orfanos, D. L. Collins, and A. C. Evans. Structure Based Morphometry of Cortical Folding Correlates of Handedness. In Proc. 9th HBM, Neuroimage vol 19 (2), pages 1094, 2003. [bibtex-entry]


  59. D. Rivière, J. Régis, Y. Cointepas, D. Papadopoulos-Orfanos, A. Cachia, and J.-F. Mangin. A freely available Anatomist/BrainVISA package for structural morphometry of the cortical sulci. In Proc. 9th HBM, Neuroimage 19(2), New York,, pages 934, 2003. Keyword(s): brainvisa. [bibtex-entry]


  60. A. Cachia, J.-F. Mangin, D. Rivière, D. Papadopoulos-Orfanos, I. Bloch, and J. Régis. Gyral Parcellation of the Cortical Surface Using Geodesic Voronoï Diagrams. In Proc. 5th MICCAI, LNCS 2488 (Part I), Tokyo, Japan, pages 427-434, 2002. Springer Verlag. Keyword(s): Sulci, LongConfPaper. [bibtex-entry]


  61. G. Flandin, F. Kherif, X. Pennec, D. Rivière, N. Ayache, and J.-B. Poline. A new representation of fMRI data using anatomo-functional constraints. In Proc. 8th HBM, Sendai, Japan, June 2002. [bibtex-entry]


  62. G. Flandin, F. Kherif, X. Pennec, D. Rivière, N. Ayache, and J.-B. Poline. Parcellation of brain images with anatomical and functional constraints for fMRI data analysis. In Proc. 1st Proc. IEEE ISBI, Washington, DC, pages 907-910, July 2002. [bibtex-entry]


  63. A. Cachia, J.-F. Mangin, D. Rivière, N. Boddaert, A. Andrade, F. Kherif, P. Sonigo, D. Papadopoulos-Orfanos, M. Zilbovicius, J.-B. Poline, I. Bloch, F. Brunelle, and J. Régis. A Mean Curvature Based Primal Sketch to Study the Cortical Folding Process from Antenatal to Adult Brain. In Proc. 4th MICCAI, LNCS-2208, UtrechtThe Netherlands, pages 897-904, 2001. Springer Verlag. Keyword(s): Sulci, ScaleSpace, LongConfPaper. [bibtex-entry]


  64. P. Cachier, J.-F. Mangin, X. Pennec, D. Rivière, D. Papadopoulos-Orfanos, J. Régis, and N. Ayache. Multisubject Non-rigid Registration of Brain MRI Using Intensity and Geometric Features. In Proc. 4th MICCAI, LNCS-2208, UtrechtThe Netherlands, pages 734-742, 2001. Springer Verlag. Keyword(s): Sulci, Registration, LongConfPaper. [bibtex-entry]


  65. J.-F. Mangin, D. Rivière, D. Papadopoulos-Orfanos, and J. Régis. A virtual expert of cortical folding patterns. In ISMRM/ESMRMB, Glasgow, Scotland, pages 122, 2001. [bibtex-entry]


  66. D. Rivière, J.-F. Mangin, D. Papadopoulos-Orfanos, Jean-Marc Martinez, V. Frouin, and J. Régis. Automatic Recognition of Cortical Sulci Using a Congregation of Neural Networks. In Proc. 3rd MICCAI, LNCS 1935, Pittsburgh, pages 40-49, 2000. Keyword(s): Sulci, Computer Science. [bibtex-entry]


  67. D. Rivière, D. Papadopoulos-Orfanos, C. Poupon, F. Poupon, O. Coulon, J.-B. Poline, V. Frouin, J. Régis, and J.-F. Mangin. A structural browser for human brain mapping. In Proc. 6th HBM, NeuroImage 11(5), San Antonio, Texas, pages 912, 2000. Keyword(s): Computer Science. [bibtex-entry]


  68. D. Rivière, J.-F. Mangin, J.-M. Martinez, F. Chavand, and V. Frouin. Neural network based learning of local compatibilities for segment grouping. In SSPR'98, LNCS 1451, Sydney, Australia, pages 349-358, 1998. Springer Verlag. Keyword(s): Sulci, LongConfPaper. [bibtex-entry]


Miscellaneous

  1. P. Roca, and D. Rivière, and J.-F. Mangin. Etude de l'équation eikonale et nouveaux descripteurs des sillons du cortex. Master's thesis, Supélec, Université Paul Verlaine de Metz, 2007. Keyword(s): brainvisa. [bibtex-entry]



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