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Publications of year 2006

Thesis

  1. S. Donnet. Inversion de Données IRMf. Estimation et Sélection de Modèles. PhD thesis, Université de Paris--Sud, Orsay , France, Nov. 2006. Keyword(s): intra-subject analysis, fMRI, Stochastic Differential Equations. [bibtex-entry]


  2. S. Makni. Détection-estimation conjointe de l'activité cérébrale en IRMf. PhD thesis, Université de Paris--Sud, Orsay , France, Nov. 2006. Keyword(s): intra-subject analysis, fMRI, Bayesian inference, MCMC. [bibtex-entry]


  3. M. Perrin. Imagerie de diffusion a haute résolution angulaire : étude du modèle q-ball par couplage simulations - fantômes et applications au suivi de fibres et a la parcellisation du cortex. PhD thesis, Université de Paris-Sud, Orsay , France, Nov. 2006. Keyword(s): Diffusion. [bibtex-entry]


Articles in journal or book chapters

  1. X. Pennec, N. Ayache, A. Roche, and P. Cachier. Non-rigid MR/US registration for tracking brain deformations. In R. S. Blum and Z. Liu, editors, Multi-Sensor Image Fusion and Its Applications. CRC Press, Boca Raton, FL, First edition, 2006. [bibtex-entry]


  2. J Andoh, E Artiges, Ch. Pallier, D. Rivière, J.-F. Mangin, A. Cachia, M Plaze, M-L Paillère-Martinot, and J.-L. Martinot. Modulation of language areas with functional MR image-guided magnetic stimulation. Neuroimage, 29(2):619-627, 2006. [bibtex-entry]


  3. T.R. Coyle, P. Kochunov, R. D. Patel, F. G. Nery, J. L. Lancaster, J.-F. Mangin, D. Rivière, D.R. Pillow, G.J. Davis, M.A. Nicoletti, E. Serap Monkul, P. T. Fox, and J.C. Soares. Cortical sulci and bipolar disorder. Neuroreport, 17(16):1739-42, 2006. Keyword(s): Sulci, brainvisa. [bibtex-entry]


  4. G. Dehaene-Lambertz, S. Dehaene, J.-L. Anton, A. Campagne, P. Ciuciu, P. Guillaume, I. Denghien, A. Jobert, D. Le Bihan, M. Sigman, C. Pallier, and J.-B. Poline. Functional Segregation of Cortical Language Areas by Sentence Repetition. Hum. Brain Mapp., 27:360-371, 2006. [bibtex-entry]


  5. G. Dehaene-Lambertz, L. Hertz-Pannier, J. Dubois, S. Mériaux, A. Roche, and M. Sigman. Functional organization of perisylvian activation during presentation of sentences in preverbal infants. Proc. Natl. Acad. Sci. USA, 103:14240-14245, 2006. [bibtex-entry]


  6. S. Donnet, M. Lavielle, and J.-B. Poline. Are fMRI event-related response constant in time? A model selection answer.. Neuroimage, pp 1169-1176, Apr. 2006. [bibtex-entry]


  7. J. Dubois, L. Hertz-Pannier, G. Dehaene-Lambertz, Y. Cointepas, and D. Le Bihan. Assessment of the early organization and maturation of infants' cerebral white matter fiber bundles: a feasibility study using quantitative diffusion tensor imaging and tractography. Neuroimage, 30(4):1121-32, 2006. Keyword(s): Diffusion, brainvisa. [bibtex-entry]


  8. J. Dubois, C. Poupon, F. Lethimonnier, and D. Le Bihan. Optimized diffusion gradient orientation schemes for corrupted clinical DTI data sets. MAGMA, 19(3):134-43, 2006. Keyword(s): brainvisa. [bibtex-entry]


  9. Christophe Grova, Salima Makni, G. Flandin, P. Ciuciu, J. Gotman, and J.-B. Poline. Anatomically informed interpolation of fMRI data on the cortical surface. Neuroimage, 31:1475-1486, 2006. [bibtex-entry]


  10. D. Le Bihan, C. Poupon, A. Amadon, and F. Lethimonnier. Artifacts and pitfalls in diffusion MRI. J Magn Reson Imaging, 24(3):478-88, 2006. Keyword(s): Diffusion. [bibtex-entry]


  11. S. Mériaux, A. Roche, G. Dehaene-Lambertz, B. Thirion, and J.-B. Poline. Combined permutation test and mixed-effect model for group average analysis in fMRI.. Hum. Brain Mapp., 27(5):402-410, May 2006. Keyword(s): group analysis, fMRI, nonparametric statistics, mixed effects. [bibtex-entry]


  12. J.-B. Poline, S.C. Strother, G. Dehaene-Lambertz, G.F. Egan, and J. L. Lancaster. Motivation and synthesis of the FIAC experiment: Reproducibility of fMRI results across expert analyses.. Hum. Brain Mapp., 27(5):351-359, May 2006. [bibtex-entry]


  13. B. Thirion, S. Dodel, and J.-B. Poline. Detection of signal synchronizations in resting-state fMRI datasets.. Neuroimage, 29(1):321-327, Jan. 2006. [bibtex-entry]


  14. B. Thirion, E. Duchesnay, E. M. Hubbard, J. Dubois, J.-B. Poline, D. Le Bihan, and S. Dehaene. Inverse retinotopy: inferring the visual content of images from brain activation patterns.. Neuroimage, 33(4):1104-1116, Dec. 2006. Keyword(s): Humans, Imagination, Magnetic Resonance Imaging, Models, Theoretical, Retina, Visual Cortex, Visual Perception. [Abstract] [bibtex-entry]


  15. B. Thirion, G. Flandin, P. Pinel, A. Roche, P. Ciuciu, and J.-B. Poline. Dealing with the shortcomings of spatial normalization: Multi-subject parcellation of fMRI datasets. Hum. Brain Mapp., 27(8):678-693, Aug. 2006. Keyword(s): fMRI. [bibtex-entry]


  16. J. Valette, M. Guillermier, F. Boumezbeur, C. Poupon, A. Amadon, P. Hantraye, and V. Lebon. B0 homogeneity throughout the monkey brain is strongly improved in the sphinx position as compared to the supine position. J Magn Reson Imaging, 23(3):408-412, 2006. [bibtex-entry]


Conference articles

  1. A. Barbot, D. P. Schwartz, K. N'Diaye, A. Bellio, J. Mattout, M. Pélégrini-Issac, Y. Cointepas, D. Rivière, and A. Ducorps. A MEG/EEG analysis toolbox for BrainVISA. In Hum. Brain Mapp., Florence, 2006. Keyword(s): brainvisa, meeg. [bibtex-entry]


  2. P. Cathier and J.-F. Mangin. Registration of cortical connectivity matrices. In Proc. MMBIA2006, New York, USA, 2006. [bibtex-entry]


  3. P. Ciuciu, J. Idier, and S. Makni. Modeling non-linear and non-stationary effects of the BOLD response using mixture models in fMRI. In Proc. 12th HBM CD-Rom, Florence, Italy, June 11-15 2006. [bibtex-entry]


  4. C. Clouchoux, O. Coulon, J.-L Anton, and J.-F. Mangin, and J. Régis. A new cortical surface parcellation model and its automatic implementation. In Proc. 9th MICCAI, LNCS 4191, Copenhaegen, Denmark, pages 193-200, Oct. 2006. Springer Verlag. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  5. C. Clouchoux, O. Coulon, G. Operto, D. Rivière, K. Dauchot, A. Sirigu, and J.L. Anton. Cortical localization via hemisphere surface parameterization. In Human Brain Mapping, Florence, Italy, 2006. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  6. S. Makni, P. Ciuciu, J. Idier, and J.-B. Poline. Anatomically informed joint detection-estimation of brain activity. In Proc. 12th HBM CD-Rom, Florence, Italy, June 11-15 2006. Keyword(s): intra-subject analysis, fMRI, Bayesian inference, MCMC. [bibtex-entry]


  7. S. Makni, P. Ciuciu, J. Idier, and J.-B. Poline. Bayesian joint detection-estimation of brain activity using MCMC with a Gamma-Gaussian mixture prior model. In Proc. 31th Proc. IEEE ICASSP, volume V, Toulouse, France, pages 1093-1096, May 2006. Keyword(s): intra-subject analysis, fMRI, Bayesian inference, MCMC. [bibtex-entry]


  8. S. Makni, P. Ciuciu, J. Idier, and J.-B. Poline. Joint detection-estimation of brain activity in fMRI using an autoregressive noise model. In 3th Proc. IEEE ISBI, Arlington, VA, pages 1048-1051, Apr. 2006. [bibtex-entry]


  9. J.-L. Martinot, T. Kircher, P. McGuire, M.-L. Paillère-Martinot, A. Galinowski, R. De Beaurepaire, D. Januel, D. Ringuenet, M. Plaze, J. Andoh, E. Artiges, F. Bellivier, E. Duchesnay, A. Cachia, and J.-F. Mangin. Cortical gyrification and (developmental) pathopsychology.. In AEP, Nice, France, 2006. Keyword(s): Sulci, Anatomy. [bibtex-entry]


  10. S. Mériaux, A. Roche, G. Dehaene-Lambertz, and J.-B. Poline. When do mixed-effect models fail to improve detection sensitivity in fMRI group activation maps?. In Neuroimage (HBM'06), Florence, Italy, 2006. [bibtex-entry]


  11. S. Mériaux, A. Roche, B. Thirion, and G. Dehaene-Lambertz. Robust statistics for nonparametric group analysis in fMRI. In Proc. 3th Proc. IEEE ISBI, Arlington, VA, pages 936-939, Apr. 2006. Keyword(s): robust statistics, group analysis, nonparametric tests, permutation tests, bootstrap. [bibtex-entry]


  12. M. Perrin, C. Poupon, D. Rivière, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Q-ball imaging simulation with a numerical diffusion fiber crossing phantom. In 12th HBM Neuroimage, number 1164, Florence, Italie, 2006. Keyword(s): brainvisa. [bibtex-entry]


  13. C. Poupon, F. Poupon, L. Allirol, and J.-F. Mangin. A database dedicated to anatomo-functional study of human brain connectivity. In 12th HBM Neuroimage, number 646, Florence, Italie, 2006. Keyword(s): brainvisa. [bibtex-entry]


  14. C. Rabrait, P. Ciuciu, C. Poupon, D. Le Bihan, and F. Lethimonnier. Temporal analysis of the BOLD response using high temporal resolution Echo Volumar Imaging. In Proc. 14th ISMRM, May 2006. [bibtex-entry]


  15. C. Rabrait, C. Poupon, P. LeRoux, A. Ribès, D. Le Bihan, and F. Lethimonnier. Parallel zoom EVI: effects of short TR on image quality. In 14th ISMRM, Seattle, USA, May 2006. [bibtex-entry]


  16. B. Thirion, E. Duchesnay, E. M. Hubbard, J. Dubois, J.-B. Poline, and S. Dehaene. Reading the brain visual system as an inverse problem. In Proc. 3th Proc. IEEE ISBI, Washington, USA, Apr.6-9 2006. [bibtex-entry]


  17. B. Thirion, P. Pinel, and J.-B. Poline. Making reliable Random Effects Analyses : How many subjects ?. In Proc. 12th HBMCD-Rom, Florence, Italy, June11-15 2006. [bibtex-entry]


  18. B. Thirion, A. Roche, P. Ciuciu, and J.-B. Poline. Improving sensitivity and reliability of fMRI group studies through high level combination of individual subjects results. In Proc. MMBIA2006, New York, USA, June17-18 2006. [bibtex-entry]


  19. B. Thyreau, B. Thirion, G. Flandin, and J.-B. Poline. Anatomo-functional description of the brain: a probabilistic approach. In Proc. 31th Proc. IEEE ICASSP, volume V, Toulouse, France, pages 1109-1112, May 2006. Keyword(s): fMRI, functional brain imaging, Bayesian approach, parcellation, Gaussian mixture, Variational Bayes. [bibtex-entry]


Miscellaneous

  1. T. Vincent. Contribution of a spatial correlation model to the detection-estimation of cerebral activity in functional MRI. Msc thesis, Universit de Cergy--Pontoise, M2 MADOCS, Orsay, France, Sep. 2006. [bibtex-entry]



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