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Publications of year 2012

Articles in journal or book chapters

  1. P. Ciuciu, F. Forbes, T. Vincent, and L. Chaari. Détection-estimation conjointe en IRM fonctionnelle, pages in press. Hermes Science Publishing, 2012. [bibtex-entry]


  2. J. Andoh and J.-L. Martinot. A Triangulation-Based MRI-Guided Method for TMS Coil Positioning. NEUROIMAGING--METHODS, pp 163, 2012. [bibtex-entry]


  3. S. L. Bogart, J.-F. Mangin, S. J. Schapiro, L. Reamer, A. J. Bennett, P. J. Pierre, and W. D. Hopkins. Cortical sulci asymmetries in chimpanzees and macaques: a new look at an old idea. NeuroImage, 61(3):533-541, 2012. [bibtex-entry]


  4. V. Brion, O. Riff, M. Descoteaux, J.-F. Mangin, D. Le Bihan, C. Poupon, and F. Poupon. The Parallel Kalman Filter: an efficient tool to deal with real-time non central Chi noise correction. SFRMBM, 66:204-224, 2012. [bibtex-entry]


  5. P Ciuciu, G Varoquaux, P Abry, S Sadaghiani, and A Kleinschmidt. Scale-Free and Multifractal Time Dynamics of fMRI Signals during Rest and Task.. Frontiers in physiology, 3(Article 186):1-18, June 2012. [bibtex-entry]


  6. J. Dubois, G. Dehaene-Lambertz, J.-F. Mangin, D. Le Bihan, P. S. Hüppi, and L. Hertz-Pannier. Brain development of infant and MRI by diffusion tensor imaging. Neurophysiol Clin., 42(1):1-9, 2012. [bibtex-entry]


  7. M. Fouquet, B. Desgranges, R La Joie, D. Rivière, J.-F. Mangin, B. Landeau, F. Mézenge, A. Pélerin, V. de la Sayette, F. Viader, J. C. Baron, F. Eustache, and G. Chételat. Role of hippocampal CA1 atrophy in memory encoding deficits in amnestic Mild Cofbitive Impairment. Neuroimage, 59(4):3309-15, 2012. [bibtex-entry]


  8. D. Germanaud, J. Lefèvre, R. Toro, C. Fischer, J. Dubois, L. Hertz-Pannier, and J.-F. Mangin. Larger is twistier: spectral analysis of gyrification (SPANGY) applied to adult brain size polymorphism. NeuroImage, 63(3):1257-1272, 2012. [bibtex-entry]


  9. P. Guevara, D. Duclap, C. Poupon, L. Marrakchi-Kacem, P. Fillard, D. Le Bihan, M. Leboyer, J. Houenou, and J.-F. Mangin. Automatic fiber bundle segmentation in massive tractography datasets using a multi-subject bundle atlas. Neuroimage, 2012. [bibtex-entry]


  10. E. Jouvent, J.-F. Mangin, E. Duchesnay, R. Porcher, M. Düring, Y. Mewald, J. P. Guichard, D. Hervé, S. Reyes, N. Zieren, M. Dichgans, and H. Chabriat. Longitudinal changes of cortical morphology in CADASIL. Neurobiol Aging, 33(5):1002.e29-36, 2012. [bibtex-entry]


  11. E. Jouvent, J.-F. Mangin, D. Hervé, M. Düring, M. Dichgans, and H. Chabriat. Cortical folding influences migraine aura symptoms in CADASIL. J Neurol Neurosurg Psychiatry, 83(2):213-6, 2012. [bibtex-entry]


  12. P. Kochunov, W. Rogers, J.-F. Mangin, and J. L. Lancaster. A Library of Cortical Morphology Analysis Tools to Study Development, Aging and Genetics of Cerebral Cortex. Neuroinformatics, 10(1):81-96, 2012. Keyword(s): brainvisa. [bibtex-entry]


  13. L. Marais, V. Perlbarg, C. Poupon, U. Thoprakarn, B. Pinsard, J.-F. Mangin, X. Golay, G. Barker, J. Hajnal, D. Hill, and others. Cross-vendor implementation and test-retest analysis of ADNI2 functional MRI (fMRI) and diffusion tensor imaging (DTI) sequences for multicenter clinical trials in Alzheimer's disease. Alzheimer's & Dementia, 8(4):P339, 2012. [bibtex-entry]


  14. G. Operto, D. Rivière, B. Fertil, R. Bulot, J.-F. Mangin, and O. Coulon. Structural Analysis of fMRI data: a surface-based framework for multi-subject studies. Medical Image Analysis, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  15. C. Poupon, F. Poupon, A. Roche, and J.-F. Mangin. Real-time magnetic resonance diffusion imaging. 2012. [bibtex-entry]


  16. P. Reiner, E. Jouvent, E. Duchesnay, R. Cuingnet, J.-F. Mangin, and H. Chabriat. Sulcal Span in Alzheimer's Disease, Amnestic Mild Cognitive Impairment, and Healthy Controls. J Alzheimers Dis., 2012. [bibtex-entry]


  17. V. Siless, J. Glaunes, P. Guevara, J.-F. Mangin, C. Poupon, D. Le Bihan, B. Thirion, and P. Fillard. Joint T1 and brain fiber log-demons registration using currents to model geometry. Medical Image Computing and Computer-Assisted Intervention--MICCAI 2012, pp 57-65, 2012. [bibtex-entry]


  18. G. Spulber, A. Redolfi, L.-O. Wahlund, F. Barkhof, R. McClatchey, C. Finochiaro, J.-F. Mangin, P. Giannakopoulos, J. Montagnan, A. Evans, and others. N4U-neuGRID for Users: a web-based gateway to neuroimaging research. EUROPEAN JOURNAL OF NEUROLOGY, 19:413-413, 2012. [bibtex-entry]


  19. Z. Y. Sun, S. Klöppel, D. Rivière, M. Perrot, R. Frackowiak, H. Siebner, and J.-F. Mangin. The effect of handedness on the shape of the central sulcus. Neuroimage, 60(1):332-9, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  20. M. Tamura, H. Nishibayashi, M. Ogura, Y. Uematsu, T. Itakura, J.-F. Mangin, J. Régis, S. Ikuta, K. Yoshimitsu, T. Suzuki, and others. MRI Based Sulcal Pattern Analysis for Diagnosis and Clinical Application in Neurosurgery. Computer Aided Surgery, pp 135-143, 2012. [bibtex-entry]


Conference articles

  1. C. Bakhous, F. Forbes, T. Vincent, L. Chaari, M. Dojat, and P. Ciuciu. Adaptive experimental condition selection in event-related fMRI. In 9th Proc. IEEE ISBI, Barcelona, Spain, pages 1755-1758, May 2012. [bibtex-entry]


  2. C. Bakhous, F. Forbes, T. Vincent, L. Chaari, M. Dojat, and P. Ciuciu. Sélection de variable dans un cadre bayésien de traitement de données d'IRM fonctionnelle. In Journées de Statistique de la Société Française de Statistique (SFdS), Brussels, Belgium, May 2012. [bibtex-entry]


  3. C. Boyer, P. Ciuciu, P. Weiss, and S. Mériaux. HYR$^2$PICS: Hybrid Regularized Reconstruction for combined Parallel Imaging and Compressive Sensing in MRI. In 9th Proc. IEEE ISBI, Barcelona, Spain, pages 66-69, May 2012. [bibtex-entry]


  4. V. Brion, O. Riff, M. Descoleaux, J.-F. Mangin, D. Le Bihan, C. Poupon, and F. Poupon. The Parallel Kalman Filter: An efficient tool to deal with real-time non central $\chi$ noise correction of HARDI data. In Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on, pages 34-37, 2012. IEEE. [bibtex-entry]


  5. L. Chaari, F. Forbes, T. Vincent, and P. Ciuciu. Adaptive hemodynamic-informed parcellation of fMRI data in a variational Joint Detection Estimation framework. In 15th Proc. MICCAI, LNCS 7512, (Part III), Nice, France, pages 180-188, Oct. 2012. Springer Verlag. [bibtex-entry]


  6. L. Chaari, F. Forbes, T. Vincent, and P. Ciuciu. Robust voxel-wise Joint Detection Estimation of Brain Activity in fMRI. In 19th Proc. IEEE ICIP, Orlando, USA, pages in press, Oct. 2012. [bibtex-entry]


  7. O. Coulon, V. Fonov, J.-F. Mangin, and L. D. Collins. Atlas-based clustering of sulcal patterns: Application to the left inferior frontal sulcus. In Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on, pages 426-429, 2012. IEEE. [bibtex-entry]


  8. D. Duclap, A. Lebois, B. Schmitt, O. Riff, P. Guevara, L. Marrakchi-Kacem, V. Brion, F. Poupon, J.-F. Mangin, and C. Poupon. Connectomist-2.0: a novel diffusion analysis toolbox for BrainVISA. In 29th ESMRMB, Lisbone, Portugal, 2012. [bibtex-entry]


  9. C. Fischer, G. Operto, S. Laguitton, M. Perrot, I. Denghien, D. Rivière, and J.-F. Mangin. Morphologist 2012: the new morphological pipeline of BrainVISA. In Proc. HBM, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  10. A. Lebois, B. Schmitt, D. Duclap, F. Poupon, and C. Poupon. A novel diffusion weighted arbitrary spin echo pulse sequence to customize diffusion gradient shapes. In 29th ESMRMB, Lisbone, Portugal, 2012. [bibtex-entry]


  11. J. Lefèvre, D. Germanaud, C. Fischer, R. Toro, D. Rivière, and O. Coulon. Fast surface-based measurements using first eigenfunction of the Laplace-Beltrami Operator: Interest for sulcal description. In Proc. 9th Proc. IEEE ISBI, pages 1527-1530, 2012. Keyword(s): lnao. [bibtex-entry]


  12. L. Marrakchi-Kacem, C. Delmaire, P. Guevara, F. Poupon, J. Yelnik, S. Lecomte, P. Roca, A. Tucholka, A. Durr, J.-F. Mangin, M. Chupin, S. Lehericy, and C. Poupon. Basal ganglia connectivity inferred from tractography: dealing with direct and indirect connections. In 20th ISMRM, Melbourne, Australia, 2012. [bibtex-entry]


  13. G. Operto, G. Auzias, A. Le Troter, M. Perrot, D. Rivière, J. Dubois, P. S. Hüppi, O. Coulon, and J.-F. Mangin. Structural group analysis of cortical curvature and depth patterns in the developing brain. In Proc. 9th Proc. IEEE ISBI, pages 422-425, 2012. Keyword(s): brainvisa, lnao. [bibtex-entry]


  14. T. Vincent, L. Chaari, C. Bakhous, S. Badillo, and P. Ciuciu. Pyhrf: hemodynamics-centered fMRI data analyses. In Medical Analysis Workshop, 9th Proc. ISBI, Barcelona, Spain, 2012. [bibtex-entry]


  15. N. Zilber, P. Ciuciu, P. Abry, and V. van Wassenhove. Modulation of scale-free properties of brain activity in MEG. In 9th Proc. IEEE ISBI, Barcelona, Spain, pages 1531-1534, May 2012. [bibtex-entry]


Internal reports

  1. L. Chaari, S. Mériaux, S. Badillo, J.-C. Pesquet, and P. Ciuciu. Multidimensional Wavelet-based Regularized Reconstruction for Parallel Acquisition in Neuroimaging. in revision to EURASIP Journal on Advances in Signal Processing, LNAO, CEA-NeuroSpin, France & LIGM, University Paris-Est, France, Apr. 2012. [bibtex-entry]


  2. L. Chaari, T. Vincent, F. Forbes, M. Dojat, and P. Ciuciu. Fast joint detection-estimation of evoked brain activity in event-related fMRI using a variational approach. in revision to IEEE Trans. Med. Imag., Mistis Team, INRIA Rhne-Alpes, Grenoble & LNAO, CEA-NeuroSpin, France, June 2012. [bibtex-entry]



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