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Publications of year 2013

Articles in journal or book chapters

  1. G. Auzias, J. Lefèvre, A. Le Troter, C. Fischer, M. Perrot, J. Régis, and O. Coulon. Model-driven harmonic parameterization of the cortical surface: HIP-HOP. Medical Imaging, IEEE Transactions on, 32(5):873-887, 2013. [bibtex-entry]


  2. S. Badillo, T. Vincent, and P. Ciuciu. Group-level impacts of within- and between-subject hemodynamic variability in fMRI. Neuroimage, 82:433-448, 2013. [bibtex-entry]


  3. S. Badillo, T. Vincent, and P. Ciuciu. Group-level impacts of within- and between-subject hemodynamic variability in fMRI. Neuroimage, 82:433-448, 15 Nov. 2013. [bibtex-entry]


  4. V. Brion, C. Poupon, O. Riff, S. Aja-Fernández, A. Tristán-Vega, J.-F. Mangin, D. Le Bihan, and F. Poupon. Noise correction for HARDI and HYDI data obtained with multi-channel coils and Sum of Squares reconstruction: An anisotropic extension of the LMMSE. Magnetic resonance imaging, 31(8):1360-1371, 2013. [bibtex-entry]


  5. L. Chaari, T. Vincent, F. Forbes, M. Dojat, and P. Ciuciu. Fast joint detection-estimation of evoked brain activity in event-related fMRI using a variational approach. IEEE Trans. Med. Imag., 32(5):821-837, May 2013. [bibtex-entry]


  6. L. Edward, G. Operto, S. Poret, Y. Cointepas, N. Cheaib, L. Makkaoui, and B. Batrancourt. OntoCATI: Towards an ontology of neuroimaging measures in the CATI Platform. Informatics 2013, pp 283, 2013. [bibtex-entry]


  7. J. Lefevre, V. Intwali, L. Hertz-Pannier, P. S. Hüppi, J.-F. Mangin, J. Dubois, and D. Germanaud. Surface smoothing: a way back in early brain morphogenesis. Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013, pp 590-597, 2013. [bibtex-entry]


  8. J.-F. Mangin, P. Fillard, Y. Cointepas, D. Le Bihan, V. Frouin, and C. Poupon. Toward global tractography. NeuroImage, 80:290-296, 2013. [bibtex-entry]


  9. L. Marrakchi-Kacem, C. Delmaire, P. Guevara, F. Poupon, S. Lecomte, A. Tucholka, P. Roca, J. Yelnik, A. Durr, J.-F. Mangin, and others. Mapping cortico-striatal connectivity onto the cortical surface: a new tractography-based approach to study Huntington disease. PloS one, 8(2):e53135, 2013. [bibtex-entry]


  10. A. Schwarz, B. Pinsard, V. Perlbarg, Y. Lu, L. Marais, D. Hill, and J.-F. Mangin. Task-free fMRI in clinical trials: Selection of covariates and numeric endpoints. Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 9(4):P588, 2013. [bibtex-entry]


  11. A. Schwarz, C. Longo dos Santos, D. Duclap, C. Poupon, L. Marais, D. Hill, and J.-F. Mangin. Automatic diffusion-based fractional anisotropy measurements weighted by fiber density. Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 9(4):P97, 2013. [bibtex-entry]


  12. G. Spulber, A. Redolfi, L.-O. Wahlund, K. Cover, C. Finocchiaro, R. McClatchey, D. Manset, J.-F. Mangin, P. Giannakopoulos, A. Toga, and others. N4U: a web-based gateway to neuroimaging research. European Psychiatry, 28:1, 2013. [bibtex-entry]


  13. M. Tamura, M. Hayashi, Y. Konishi, N. Tamura, J. Regis, J.-F. Mangin, T. Taira, Y. Okada, Y. Muragaki, and H. Iseki. Advanced image coregistration within the Leksell workstation for the planning of glioma surgery: initial experience. Journal of neurological surgery reports, 74(2):118, 2013. [bibtex-entry]


  14. M. Tamura, Y. Konishi, N. Tamura, M. Hayashi, N. Nakao, Y. Uematsu, T. Itakura, J. Régis, J.-F. Mangin, Y. Muragaki, and others. Usefulness of Leksell GammaPlan for preoperative planning of brain tumor resection: Delineation of the cranial nerves and fusion of the neuroimaging data, including diffusion tensor imaging. Gamma Knife Neurosurgery in the Management of Intracranial Disorders, pp 179-185, 2013. [bibtex-entry]


  15. M. Tamura, T. Maruyama, Y. Konishi, M. Hayashi, J. Régis, J.-F. Mangin, T. Taira, Y. Okada, Y. Muragaki, and H. Iseki. The Impact of Image Co-registration within Leksell Workstation For Glioma Surgery Management. STEREOTACTIC AND FUNCTIONAL NEUROSURGERY, 91:308-308, 2013. [bibtex-entry]


Conference articles

  1. S. Badillo, G. Varoquaux, and P. Ciuciu. Hemodynamic estimation based on consensus clustering. In IEEE Pattern Recognition in Neuroimaging (PRNI), Philadelphia, USA, June 2013. [bibtex-entry]


  2. S. Badillo, T. Vincent, and P. Ciuciu. Multi-session extension of the joint-detection framework in fMRI. In 10th Proc. IEEE ISBI, San Francisco, CA, pages 1504-1507, Apr. 2013. [bibtex-entry]


  3. C. Bakhous, F. Forbes, T. Vincent, M. Dojat, and P. Ciuciu. Variational variable selection to assess experimental condition relevance in event-related fMRI. In 10th Proc. IEEE ISBI, San Francisco, CA, pages 1500-1503, Apr. 2013. [bibtex-entry]


  4. A. Cachia, G. Borst, J. Vidal, C. Fischer, A. Pineau, J.-F. Mangin, and O. Houde. Differences in executive control efficiency in prescool children is predicted by differences in ACC morphology. In 20th Annual Meeting of the Cognitive-Neuroscience-Society, Journal of Cognitive Neuroscience, Supplement: S, San Francisco, pages 43-43, 2013. [bibtex-entry]


  5. N. Chauffert, P. Ciuciu, J. Kahn, and P. Weiss. Traveling salesman-based variable density sampling. In 10th International CConference on Sampling Theory and Applications, Bremen, Germany, pages -, July 2013. [bibtex-entry]


  6. N. Chauffert, P. Ciuciu, and P. Weiss. Variable density compressed sensing in MRI. Theoretical vs heuristic sampling strategies. In 10th Proc. IEEE ISBI, San Francisco, CA, pages 298-301, Apr. 2013. [bibtex-entry]


  7. N. Chauffert, P. Ciuciu, P. Weiss, and F. Gamboa. From variable density sampling to continuous sampling using Markov chains. In 10th International CConference on Sampling Theory and Applications, Bremen, Germany, pages -, July 2013. [bibtex-entry]


  8. A.-L. Fouque, C. Fischer, V. Frouin, P. Ciuciu, and E. Duchesnay. Comparison of Features for Voxel-Based Analysis and Classification of Anatomical Neuroimaging Data. In 3rd Innernal Workshop on Pattern Recognition in Neuroimaging (PRNI), IEEE, 2013. [bibtex-entry]


  9. N. Labra, M. Figueroa, P. Guevara, D. Duclap, J. Hoeunou, C. Poupon, and J.-F. Mangin. GPU-Based acceleration of an automatic white matter segmentation algorithm using CUDA. In Engineering in Medicine and Biology Society (EMBC), 2013 35th Annual International Conference of the IEEE, pages 89-92, 2013. IEEE. [bibtex-entry]


  10. E. Pardo, P. Guevara, D. Duclap, J. Houenou, A. Lebois, B. Schmitt, D. Le Bihan, J.-F. Mangin, and C. Poupon. Study of the variability of short association bundles on a HARDI database. In Engineering in Medicine and Biology Society (EMBC), 2013 35th Annual International Conference of the IEEE, pages 77-80, 2013. IEEE. [bibtex-entry]


  11. B. Schmitt, D. Duclap, A. Lebois, P. Guevara, H. Zhang, Y. Assaf, F. Poupon, D. Rivière, Y. Cointepas, D. Le Bihan, J.-F. Mangin, and C. Poupon. A novel probabilistic connectivity atlas for the human connectome: the CONNECT/ARCHI atlas. In Proc. ISMRM, volume 21, pages 3155, 2013. Keyword(s): lnao. [bibtex-entry]


  12. T. Vincent, F. Forbes, and P. Ciuciu. Bayesian BOLD and perfusion source separation and deconvolution from functional ASL imaging. In 38th Proc. IEEE ICASSP, Vancouver, Canada, pages 1003-1007, May 2013. [bibtex-entry]


  13. T. Vincent, F. Forbes, and P. Ciuciu. Bayesian BOLD and perfusion source separation and deconvolution from functional ASL imaging. In 38th Proc. IEEE ICASSP, Vancouver, Canada, pages 1003-1007, May 2013. [bibtex-entry]


  14. T. Vincent, J. Warnking, M. Villien, A. Krainik, P. Ciuciu, and F. Forbes. Bayesian Joint Detection-Estimation of cerebral vasoreactivity from ASL fMRI data. In 16th Proc. Proc. MICCAI, LNCS Springer Verlag, volume 2, Nagoya, Japan, pages 616-623, Sep. 2013. [bibtex-entry]


  15. N. Zilber, P. Ciuciu, P. Abry, and V. van Wassenhove. Learning-induced modulation of scale-free properties of brain activity measured with MEG. In 10th Proc. IEEE ISBI, San Francisco, CA, pages 986-989, Apr. 2013. [bibtex-entry]



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