Hi, it seems like the online Mac installation is broken for both 4.5 and 4.6. Is there a way I could download and install the packages manually?
thanks
Search found 45 matches
- Thu May 31, 2018 12:47 pm
- Forum: BrainVISA
- Topic: Off line install for MAC
- Replies: 1
- Views: 11874
- Tue Mar 22, 2016 5:44 pm
- Forum: BrainVISA
- Topic: Problem with installing brain visa on a mac
- Replies: 3
- Views: 15048
Problem with installing brain visa on a mac
Hi, I am trying to install the latest version of brain visa and I am running into the problems like this one Error during installation process (brainvisa.app.cortical_surface.usrdoc.freesurfer_plugin_usrdoc): Could not open installer://brainvisa.app.cortical_surface.usrdoc.freesurfer_plugin_usrdoc/4...
- Thu Jun 07, 2012 2:38 pm
- Forum: BrainVISA
- Topic: Issue with the mesh format for the latest version
- Replies: 5
- Views: 7413
Re: Issue with the mesh format for the latest version
Hello, I just wanted to add some context to the issue that Peter is referring to. I am using his RIC toolbox to estimate cortical thickness, which makes use of gray matter and white matter meshes generated at the end of the Morphologist 2012 pipeline. It seems like it asserts something about the me...
- Wed Jun 06, 2012 2:15 pm
- Forum: BrainVISA
- Topic: Issue with the mesh format for the latest version
- Replies: 5
- Views: 7413
Issue with the mesh format for the latest version
There seems to be a niggling problem with the mesh files created by the latest version of brainvisa (4.2.x). If I attempt to read it as an AIMs format, the number of normal vectors is set to 0. Opening and saving it with anatomist restores the good state of the mesh. Was there a recent change in the...
- Wed May 27, 2009 4:20 pm
- Forum: Anatomist
- Topic: How to spool graphe+ mesh data to anatomist from a script?
- Replies: 2
- Views: 4290
Re: How to spool graphe+ mesh data to anatomist from a script?
Thanks Denis! I'll try that out!
- Tue May 26, 2009 4:44 pm
- Forum: Anatomist
- Topic: How to spool graphe+ mesh data to anatomist from a script?
- Replies: 2
- Views: 4290
How to spool graphe+ mesh data to anatomist from a script?
I hope there is a very simply solution to what I'm trying to do e.g. to replace the "Show Fold Graph Viewer" with a command-line interface. My issue is that our bvisa database is gargantual and this takes toll on just trying to do a quick view as there is a lot of database querying going o...
- Tue May 19, 2009 7:30 pm
- Forum: AIMS
- Topic: VipBiasCorrection
- Replies: 2
- Views: 13560
Re: VipBiasCorrection
Thanks! I have to say that even after doing two or three times already I still can't meaningfully generalize on how these parameters affect the bias correction. However, permuting across the range of them and selecting the best setting does produce much nicer results than the default parameters, esp...
- Tue May 19, 2009 7:21 pm
- Forum: BrainVISA
- Topic: FETAL BRAIN RECONSTRUCT
- Replies: 5
- Views: 5631
Re: FETAL BRAIN RECONSTRUCT
Peter, like often, you raised my curiosity, not only because of this MT sequence, but also managing to do something with our stuff with this data, while it is not the standard input. You did at least some kind of magic? Jeff Well, I trully wish I was gifted with any supernatural abilities. Unfortun...
- Mon May 18, 2009 6:42 pm
- Forum: BrainVISA
- Topic: FETAL BRAIN RECONSTRUCT
- Replies: 5
- Views: 5631
Re: FETAL BRAIN RECONSTRUCT
It is somewhat hard to get a stable WM/GM contrast in the in-utero studies as the brain doesn't start to myelinate until parturition. The magnetization transfer imaging is the only stable way of getting good regional contrast in the unmyelinated brain that I know of. I had good luck with getting MTC...
- Mon May 18, 2009 5:15 pm
- Forum: AIMS
- Topic: VipBiasCorrection
- Replies: 2
- Views: 13560
VipBiasCorrection
I wonder if there are any rules of thumb to optimize the bias correction parameters for a particular pattern of image contrast/artifacts? Specifically I'm interested on how Entropy, Regularization and Temperature should be optimized for volumetric (e.g. a central bias) versus phasearray (e.g. periph...
- Mon Jun 23, 2008 8:04 pm
- Forum: BrainVISA
- Topic: BVisa plugins for GM thickness, gyrification, etc
- Replies: 3
- Views: 3590
Re: BVisa plugins for GM thickness, gyrification, etc
Thank you Sir!
- Thu Jun 12, 2008 6:06 pm
- Forum: BrainVISA
- Topic: gyrification index
- Replies: 5
- Views: 5501
Re: gyrification index
Yes, it won't take us much time to redo the package for the new version. We just downloaded it today. Email me if you don't see it in a couple of weeks.
- Thu Jun 12, 2008 4:01 pm
- Forum: BrainVISA
- Topic: If anyone needs nifti input/out functionality
- Replies: 3
- Views: 3716
Re: If anyone needs nifti input/out functionality
Hi, This could be useful for brainvisa 3.0, but the new 3.1 version available since yesterday also includes nifti support... Thanks anyway. Denis Darn it. Always late to teh party :oops: Not to mention that it won't even work in 3.1 version since the directory structures are different. Oh. well, we...
- Thu Jun 12, 2008 3:59 pm
- Forum: BrainVISA
- Topic: gyrification index
- Replies: 5
- Views: 5501
Re: gyrification index
We have developed some tools to do it using basic BVisa functionality
http://ric.uthscsa.edu/personalpages/pe ... Index.html
Look at the posters to see the validation
http://ric.uthscsa.edu/personalpages/petr/genetics.html
http://ric.uthscsa.edu/personalpages/pe ... Index.html
Look at the posters to see the validation
http://ric.uthscsa.edu/personalpages/petr/genetics.html
- Thu Jun 12, 2008 3:57 pm
- Forum: BrainVISA
- Topic: BVisa plugins for GM thickness, gyrification, etc
- Replies: 3
- Views: 3590
BVisa plugins for GM thickness, gyrification, etc
Hey guys,
Here are bvisa stuff we've been working on and decided to share.
Look at the posters to see how they were validated
http://ric.uthscsa.edu/personalpages/petr/genetics.html
Here are bvisa stuff we've been working on and decided to share.
Look at the posters to see how they were validated
http://ric.uthscsa.edu/personalpages/petr/genetics.html