Search found 39 matches

by Melanie PELEGRINI
Mon Jun 25, 2012 12:33 pm
Forum: BrainVISA
Topic: BrainVisa and Fedora 12
Replies: 10
Views: 6136

Re: BrainVisa and Fedora 12

Yeah it works :-)))))))

Thanks a lot !
by Melanie PELEGRINI
Thu Apr 26, 2012 4:12 pm
Forum: BrainVISA
Topic: Import Tkinter on 64-bit version : problem with libtk
Replies: 1
Views: 2787

Import Tkinter on 64-bit version : problem with libtk

Hi all, I've installed a 32-bit Brainvisa 4.2.1 binary package and also a 64-bit Brainvisa 4.2.1 binary package. I'm running on a 64-bit CentOS 5.8 machine. I have a library problem when using the python from the 64-bit package. [root@...]# /PathTo/brainvisa42_x64/bin/python Python 2.5.1 (r251:54863...
by Melanie PELEGRINI
Fri Jan 27, 2012 11:04 am
Forum: BrainVISA
Topic: BrainVisa and Fedora 12
Replies: 10
Views: 6136

Re: BrainVisa and Fedora 12

Just an update to inform you that I have the same error message on 64-bit machines with CentOS 6.2, in Gnome sessions brainvisa41_x64/bin/real-bin/python: symbol lookup error: /usr/lib64/gtk-2.0/modules/libpk-gtk-module.so: undefined symbol: FcLangGetCharSet I have BrainVISA 4.1.1 installed. BrainVI...
by Melanie PELEGRINI
Tue Feb 02, 2010 10:14 am
Forum: AIMS
Topic: How does AimsFIleConvert support nifti files ?
Replies: 2
Views: 5221

Re: How does AimsFIleConvert support nifti files ?

It's just temporary, but I need Analyze format to run old programs :-( that will be adapted for nifti eventually.

Thanks for your reply !
by Melanie PELEGRINI
Mon Feb 01, 2010 4:45 pm
Forum: AIMS
Topic: How does AimsFIleConvert support nifti files ?
Replies: 2
Views: 5221

How does AimsFIleConvert support nifti files ?

Hi all, I would like to use AimsFileInfo in a pipeline of routines outside BrainVISA. I would like to convert a Nifti file xxxx.nii to Analyze format xxxx.img/.hdr. If I run . "PathTo/brainvisa32/bin/cartopack.sh" PathTo/brainvisa32/bin/command-links/AimsFileConvert -i xxxx.nii -o xxxx.img...
by Melanie PELEGRINI
Wed Dec 17, 2008 3:53 pm
Forum: BrainVISA
Topic: surface reconstruction
Replies: 15
Views: 5649

surface reconstruction

Dear all Below is a message from a colleague who does not have his subscription to the forum yet ;-) Melanie ====================================================== Dear BrainVisa Experts, I am beginner of BrainVisa, and I have a question about surface reconstruction. I did surface reconstruction us...
by Melanie PELEGRINI
Thu Oct 23, 2008 12:56 pm
Forum: BrainVISA
Topic: Iteration of importation process
Replies: 2
Views: 1640

Re: Iteration of importation process

OK, it works on the 3.1.3 package :D

Thanks

Melanie
by Melanie PELEGRINI
Wed Oct 22, 2008 2:57 pm
Forum: BrainVISA
Topic: Iteration of importation process
Replies: 2
Views: 1640

Iteration of importation process

Hi all, We're trying to import in BrainVISA 3.1.3 a *lot of* data (several hundreds of T1 MRI images). I've managed to use the new 'Import T1 MRI' interface and import a T1 image in a brand new database. But when I try to click on 'Iterate' to repeat the process on several files, I do not find it ea...
by Melanie PELEGRINI
Tue Jun 17, 2008 3:11 pm
Forum: BrainVISA
Topic: BrainVISA 3.1 does not launch
Replies: 4
Views: 2216

Re: BrainVISA 3.1 does not launch

Got it 8)

Nothing wrong with FC6...

It happens that in the .bashrc of my FC6 users, there was an 'export LD_LIBRARY_PATH' for matlab libraries, that are incompatible with python's zlib library...

Now it works :yeah:
by Melanie PELEGRINI
Tue Jun 17, 2008 2:15 pm
Forum: BrainVISA
Topic: BrainVISA 3.1 does not launch
Replies: 4
Views: 2216

Re: BrainVISA 3.1 does not launch

Once again once more :D

Local installation on FC3 and FC8 : everything OK.

Remote run from an FC3 or an FC7 or an FC8 system : everything OK

Local installation or remote run from an FC6 system : problem with zlib on all machines (I've tried 4) but one :?:
What's the matter with FC6 ?
by Melanie PELEGRINI
Tue Jun 17, 2008 10:05 am
Forum: BrainVISA
Topic: BrainVISA 3.1 does not launch
Replies: 4
Views: 2216

Re: BrainVISA 3.1 does not launch

In fact it's not from a remote FC3 that I try to run Brainvisa, but from an FC6...
OK, I'll make some tests on different machines and let you know :?
by Melanie PELEGRINI
Mon Jun 16, 2008 3:15 pm
Forum: BrainVISA
Topic: BrainVISA 3.1 does not launch
Replies: 4
Views: 2216

BrainVISA 3.1 does not launch

Hi gurus I've installed the latest Brainvisa binary package on linux (FC3 and FC8) and it works fine when I run 'brainvisa' or 'anatomist' from the machine where the binary distribution is installed. Now I tried to run 'anatomist' from another linux FC3 machine (on which the disk with the binary dis...
by Melanie PELEGRINI
Tue Nov 27, 2007 2:34 pm
Forum: Anatomist
Topic: FC6 and once again a graphic card problem...
Replies: 4
Views: 4438

OK, so I just stop worrying.

Thanks again for your help 8)
by Melanie PELEGRINI
Tue Nov 27, 2007 2:06 pm
Forum: Anatomist
Topic: FC6 and once again a graphic card problem...
Replies: 4
Views: 4438

Thanks, installing the new drivers from freshrpms completely solved the problem on the PC with Nvidia cards. On my own PC (runnig FC6), I have and ATI Radeon card, I installed the drivers from freshrpms and I can now display meshes correctly. However, I still get the following message from Anatomist...
by Melanie PELEGRINI
Fri Nov 23, 2007 5:45 pm
Forum: Anatomist
Topic: FC6 and once again a graphic card problem...
Replies: 4
Views: 4438

FC6 and once again a graphic card problem...

Hi all, We've got 3 brand new Dell machines with NVidia graphic cards, with Fedora Core 6 installed. Anatomist is unable to display meshes correctly: we've got something completely ugly in the windows, and the following message in the terminal GL_ARB_shadow present GL_SGIX_shadow present GL_SGIX_dep...

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