Search found 7 matches

by jstropel
Wed Aug 09, 2017 7:31 am
Forum: BrainVISA
Topic: Articles about the steps of the Morphologist pipeline
Replies: 1
Views: 1954

Re: Articles about the steps of the Morphologist pipeline

I'm especially looking for more detailled information about how the steps in the hemisphere processing are done.
by jstropel
Fri Aug 04, 2017 6:59 am
Forum: BrainVISA
Topic: Articles about the steps of the Morphologist pipeline
Replies: 1
Views: 1954

Articles about the steps of the Morphologist pipeline

Hello,

I am using the Morphologist pipeline but wonder where I find articles about the different steps included in this process. The descriptions in the documentation seem to be very short.

Best regards

Julius
by jstropel
Thu Jun 22, 2017 3:45 pm
Forum: BrainVISA
Topic: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode
Replies: 10
Views: 4127

Re: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode

Hi, I have done some testing an solution b) is working. I did some workaround to avoid using parameters and there are no problems anymore. I will now let it run for quite a few subjects. As I expected solution a) has caused the same problem that existed before. I tried to use the "run in parall...
by jstropel
Thu Jun 22, 2017 7:18 am
Forum: BrainVISA
Topic: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode
Replies: 10
Views: 4127

Re: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode

Hi Denis, thank you for providing so much detailed information. I used the python code you gave me and it seems to work, I will now try to a) iterate within that python script but I think I will get the same errors that I got before as this procedure should not be very different from the "itera...
by jstropel
Tue Jun 20, 2017 6:33 am
Forum: BrainVISA
Topic: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode
Replies: 10
Views: 4127

Re: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode

We tried to run BrainVisa on several Linux machines but got OpenGL errors, so this is not an option. I tried to run the script in a python loop so it shuts down everytime after completing a hemisphere but I got stuck at the point where the process shows an error that a certain module cannot be loade...
by jstropel
Mon Jun 19, 2017 7:46 am
Forum: BrainVISA
Topic: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode
Replies: 10
Views: 4127

Re: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode

Hello Olivier,

I am running these subjects iteratively, not using multithreading.

Julius

Edit: And I am using two different Windows machines, I get these errors on both.
by jstropel
Wed Jun 14, 2017 10:59 am
Forum: BrainVISA
Topic: BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode
Replies: 10
Views: 4127

BrainVISA crashes while doing the Sulcus Parameterization2015 in iteration mode

Hello, I am trying to do the Sulcus Parameterization 2015 on a bunch of subjects. Unfortunately, whenever I try to analyze more than 6 or 7 subjects the whole program crashes saying that python is not working anymore. In the console I get the following error lots of time before it crashes: QThread::...

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