BrainVISA

my processes are pointed by the 'processesPath' setting... and you are right, if I write a category_documentation in the BV standard directory, then the command brainvisa --updateDocumentation works and generate the html. Is there another way to make categories documentation for processes that I dev...

Denis, I set a BV database, and it was still not working... I found out that I must keep the original name of the "shfjHierarchy.py" file. I was renaming it for "hierarchy.py". It was the problem, the command brainvisa --updateDocumentation is not raising errors anymore. But, I s...

thank you Alexis and Denis. I am now able to produce documentation for functions, but I am still not able to generate category documentation. I tried the brainvisa --updateDocumentation command, but it doesn't work, I get 2 errors : 1) Impossible de générer la documentation pour D:\AnneSophieDubarry...

Hello, I would like to document functions that I wrote in BV. I think I understand how to write 'category_documentation.minf' and .procdoc files (even if I do not have appropriate editor...what do you use ? ), but I wonder what should I do to make the doc appear in the BV interface (in the right pan...

Hello,

I have the same problem importing dicoms.
A way to import data is to use the Aims Converter (converters -> automatic -> Aims converter).
It is not solving the problem, but it is the way I import my dicom files in BV.

Anne-Sophie

Almost all. For now I have 4 datasets, and only one is good giving results..

ok I removed Matlab7 path of the system path, and now it works.

I even put back the Matlab7 path, and it still works (it calls Matlab 6.5.1)

Thanks !

Oooopppss.. I see the matlabRelease variable (in the very last release of BV). I hadn't downloaded the latest version, sorry about that. But it doesn't solve my problem, I set variables like this : matlabRelease = 13 matlabExecutable = C:/MATLAB6p5p1/bin/win32/matlab.exe but it doesn't work... Is th...

Hello, thank you, I set the matlabExecution variable at 'C:/MATLAB6p5p1/bin/win32/matlab.exe', but it continues to launch Matlab 7 : options.set('matlabExecutable','C:/MATLAB6p5p1/bin/win32/matlab.exe') I cannot find the variable MatlabRelease, could you tell me where it is please ? (It may resolve ...

Hello Alexis, unfortunatly I don't have an answer for your problem, but I have a question for you :roll: I wonder how you can use the Matlab 6.5 if Matlab 7.0 is installed on your machine. I have both versions, and if I specify the Matlab 6.5 executable path in the field MatlabExecution of the prefe...

Thank you Denis, I saw Melanie this week who gave me the meeg package. Thank you very much ! Have you developped a Windows version ? (it seems that I can write a .bat file to adapt it, do you see anything else that would not be compatible ?) Anne-Sophie Ecole de technologie supérieure Hopital Sainte...

Hello ! I have DICOM anatomical MRIs from which I want to extract the spherical meshes. After importing them with "import T1 MRI" function, I see in Anatomist that the orientation is wrong (sagittal image appear in the axial windows, coronal in the sagittal and axial in the coronal) When I...

thanks you Denis (Riviere) I haven't try it yet, but the toolbox that Denis (Schwartz) is talking about seems to be exactly what I am looking for. I would like to align electrode positions localized from EEG protocol on an MRI (of the same patient). To do this, we place the Nazion, LPA and RPA on th...

Hello, I would like to make the registration of electrodes positions (LOCALIZED during an EEG protocol) on an anatomical MRI. It implies to find the rigid TRANFORMATION (3 rotations and 3 translations) to align 3 given points in the EEG coordinate system on 3 anatomical LANDMARKS on the MRI (Pirm1, ...