Search found 22 matches
- Tue Feb 21, 2017 1:43 pm
- Forum: Anatomist
- Topic: viewing rgb FA
- Replies: 3
- Views: 12307
viewing rgb FA
Hello dear Anatomist team, I would like to visualize fractional anisotropy colored in RGB according to the first eigen vector coordinates as done in FSLview From the first eigen vector volume I generated a RGBa volume using the corresponding anatomist fusion method but I do not know how to say to an...
- Thu Jan 19, 2017 5:16 pm
- Forum: BrainVISA
- Topic: Error using the --username option of bv_maker
- Replies: 4
- Views: 8525
Error using the --username option of bv_maker
Hello dear Brainvisa team, I am testing compilation of brainvisa on a Jessy (Debian machine) and discovered the --username option of bv_maker. I thought I could use it to solve an svn authentification issue but I have an error. If I don't use the option everything works fine. It seems that the optio...
- Thu Oct 20, 2016 2:44 pm
- Forum: BrainVISA
- Topic: Understanding and handling brainvisa referential system
- Replies: 3
- Views: 6015
Re: Understanding and handling brainvisa referential system
Super ! Thank you very much for your quick and complete answer Denis :) Thanks for the documentation link :) I have seen tracks are usually saved as graph in Brainvisa but I was not able to understand exactly how. In fact I have the output from dipy in Aims mm coordinates and would like to use Graph...
- Thu Oct 20, 2016 9:53 am
- Forum: BrainVISA
- Topic: Understanding and handling brainvisa referential system
- Replies: 3
- Views: 6015
Understanding and handling brainvisa referential system
Hello Brainvisa Team, we are currently implementing a diffusion pipeline using Brainvisa which mixes several softwares (FSL and Dipy essentially) and are sometimes writing some outputs using FSL other using nibabel (dipy use it to save fiber bundles as trk files) and we are getting some surprises. S...
- Tue Oct 04, 2016 9:01 am
- Forum: BrainVISA
- Topic: Error of Display with cluster compiled Brainvisa
- Replies: 4
- Views: 6109
Re: Error of Display with cluster compiled Brainvisa
Hi Denis,
Super ! Thank you very much for your answer
We will try it in a second time and let you know if it works.
Have a good day
Super ! Thank you very much for your answer
We will try it in a second time and let you know if it works.
Have a good day
- Sat Oct 01, 2016 2:23 pm
- Forum: BrainVISA
- Topic: Error of Display with cluster compiled Brainvisa
- Replies: 4
- Views: 6109
Re: Error of Display with cluster compiled Brainvisa
Hi Denis, thank you so much for your quick answer ^^ . Indeed, we realised so far that the libgl-mesa-dev library was coming with libgl-mesa-glx which was doing the job for compiling Brainvisa but was not working efficiently for display on our cluster due to the reasons you explained (luck ^^). Afte...
- Fri Sep 30, 2016 12:32 pm
- Forum: BrainVISA
- Topic: Error of Display with cluster compiled Brainvisa
- Replies: 4
- Views: 6109
Error of Display with cluster compiled Brainvisa
Hello Brainvisa Team ^^, We are trying to compile brainvisa on a cluster. As a first step we are testing the compilation on a specific node. The node is under Debian 7.11. We installed all dependencies as listed on the Brainvisa wiki. We retrieved the trunk and bug_fix version using the "public...