HistoAnalysis

Questions about BrainVisa usage and installation

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Dhalila
Posts: 6
Joined: Fri Jan 06, 2006 7:54 pm
Location: LIUPPA, Pau

HistoAnalysis

Post by Dhalila »

Hi Isa,
Due to the confidentiality protocol which i have to stick to, i fear i may not be able to send you the data. This will be quite a lengthy procedure to request for high level hierarchy authorisation.
In addition i define coordinates in the pipeline, it has worked and the vip bias correction is working perfectly well. But the viphistoanalysis always displays this error:
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! VIP Warning:
Strange: gap of more than 5 points along this trajectory (use smaller scale step)
-----------------------------
Singularity steming from iteration 77 and localization 7
lost at iteration 0

------------------------------
!! VIP Error:
Strange brain cascade for SPGR sequence
------------------------------

------------------------------
!! VIP Error:

Execution aborted in function 'VipAnalyseCascadesSPGRSequence'.
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I really can't understand where it does come from, i have tried to change the pipeline co-ordinates and have the vipbias correction re-executed, but but the viphistonaalysis still doesn't work out. I strongly guess that nothing will work if the viphstonaalysis doesn't. Is there a way or a strategy to solve this out.
Hope to hear from you
With sincere regards,
Dhalila
denghien
Posts: 209
Joined: Mon Apr 05, 2004 1:35 pm
Location: IFR49 / SHFJ Orsay
Contact:

Post by denghien »

Hi,

It will be difficult to help you without data !
Step of analysis histogram is very sensitive point. To begin can you give more details about TI MRI sequence, SPGR, IR ... ?

Isa
Dhalila
Posts: 6
Joined: Fri Jan 06, 2006 7:54 pm
Location: LIUPPA, Pau

histoanalysis

Post by Dhalila »

hi again,
May i send you the data by email, the file is approximately 18Mo.
Thanks and regards.
denghien
Posts: 209
Joined: Mon Apr 05, 2004 1:35 pm
Location: IFR49 / SHFJ Orsay
Contact:

Post by denghien »

I have sent a private message for you.

Isa
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