Morphologist segmentation stuck

Questions about BrainVisa usage and installation

Moderators: riviere, denghien

AlejandroBP
Posts: 8
Joined: Wed Jun 06, 2018 4:01 pm

Morphologist segmentation stuck

Postby AlejandroBP » Fri Jan 11, 2019 7:46 am

Good afternoon,

I recently updated BrainVISA on my PC and laptop (to the newest version).

Since, I've been unable to use Morphologist 2015.

It opens and I can input the .nii file, open anatomist to identify the commissure.

However when I hit run to start the process of segmentation, it gets stuck on the first step (Image orientation handling).

It does not give me any error, it just says:

"Ok, the image seems to be in the correct orientation."

It stays like this for hours without anything happening, nor procedding to the next steps.

I have tried different MRI, including converting them into different format, nothing seems go beyond this step.

I don't know if there is an important step I had to do or missing.

Help would be greatly appreciated

Thank you in advance

Alejandro

User avatar
riviere
Site Admin
Posts: 1351
Joined: Tue Jan 06, 2004 12:21 pm
Location: CEA NeuroSpin, Saint Aubin, France
Contact:

Re: Morphologist segmentation stuck

Postby riviere » Tue Feb 05, 2019 11:15 am

Hi,
Sorry for the late answer, the email notifications of the forum does not seem to work well any longer, so I have not seen your question...
Have you created a database and imported the image into it before running morphologist ?
Denis


Return to “BrainVISA”

Who is online

Users browsing this forum: No registered users and 1 guest