This message is the continuation of http://brainvisa.info/forum/viewtopic.php?t=674
because subjects/authors are not the same.
If I understand what you did :
-> Registration Mutual Information Method: there are 2 possibilities regarding the ref and the test.
I suppose that ref = anatomie and test = diffusion.
You have ref_to_test.trm (or anatomie_to_diffusion) and test_to_ref.trm (or diffusion_to_anatomie).
-> Resampling: you want to draw in the referential of diffusion so you must resample anatomie with ref_to_test.trm and you obtain a new volume called resample_anatomie.ima for example.
-> Now you can draw (with the Anatomist ROI toolbox) on resample_anatomie.ima to have an anatomical ROI in the referential of diffusion. Normally, you can do a fusion between the ROI and the diffusion in the same anatomist referential (color dot).
To review how to handle referential in Anatomist, please see "The french manual of Anatomist":
http://brainvisa.info/doc/anatomist-3.0 ... /index.htm
WARNING: it isn't obvious but there are distorsions between anatomy and diffusion modalities (but it is very variable depending on the quality of sequences and scanner). So handle with care ....
Questions about BrainVisa usage and installation
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