Error for non-admin users - siGraph2Label

[ericbarnhill]

Salut et bonne année,

We are getting ready to start our sulci studies here.

I am trying to set up several non-administrative users with access to BrainVISA, a common database, and related scripts and modules. I started getting an error with siGraph2Label. So this may be a problem with permissions or locations.

My command in the bash script looks like this. The file in $LFOLDSPATH is L[subject]_default_session_auto.arg:

Code: Select all

./siGraph2Label -g $LFOLDSPATH -tr $TRLPATH/CS.trl -a label -o $CSPATH/CS-L.ima -b aims_ss -b aims_bottom -b aims_other

It gives:

Code: Select all

Warning: wrong filename_base in graph, trying to fix it

Should I be concerned about this warning?

Thanks,
Eric

p.s. I edited this post because I solved an earlier problem.

[Dominique Geffroy]

Hello,

This warning means that the name of the .data directory indicated in the .arg (in the field filename_base) is not correct. In this case, a .data directory with the same name as the .arg will be search for. So if L[subject]_default_session_auto.data exists and is located in the same directory than the .arg, there should be no problem. You correct the error in filename_base using AimsGraphConvert -i L[subject]_default_session_auto.arg.

Dominique