Sulci recognition, error message
Posted: Fri Aug 29, 2014 11:59 am
Morphologist --> Sulci --> Recognition --> Sulci Recognition (Both Hemispheres)
Hello everybody,
I have recently installed Brainvisa 4.4 (brainvisa-Mandriva-2008.0-x86_64-4.4.0-2013_11_18.tar) and I am getting error messages during Sulci recognition process. My OS is Ubuntu 13.04
All Morphologist (2013) steps ran without errors but when the sulci recognition started I have got this error message.
The SPAM models are correctly installed (Brainvisa finds them).
Process Sulci Recognition (both hemispheres) started on 2014/08/29 12:55
/usr/local/brainvisa/share/brainvisa-share-4.4/nomenclature/syntax/graph.stx: found "" while waiting for "*BEGIN" (line 838) : , line 838
Traceback (most recent call last): File "/usr/local/brainvisa/scripts/sigraph/sulci_registration/independent_tag_with_registration.py", line 467, in <module>
if __name__ == '__main__' : main() File "/usr/local/brainvisa/scripts/sigraph/sulci_registration/independent_tag_with_registration.py", line 385, in main graph = io.load_graph(options.transfile, options.input_graphname) File "/usr/local/brainvisa/python/sulci/common/io.py", line 40, in load_graph return load_graphs(transfile, [graphname], label_mode)[0] File "/usr/local/brainvisa/python/sulci/common/io.py", line 35, in load_graphs ft.translate(g, label_mode, label_mode) TypeError: FoldLabelsTranslator.translate(): argument 1 has unexpected type 'Graph'
Any idea ??
Best regards
Yasser
Hello everybody,
I have recently installed Brainvisa 4.4 (brainvisa-Mandriva-2008.0-x86_64-4.4.0-2013_11_18.tar) and I am getting error messages during Sulci recognition process. My OS is Ubuntu 13.04
All Morphologist (2013) steps ran without errors but when the sulci recognition started I have got this error message.
The SPAM models are correctly installed (Brainvisa finds them).
Process Sulci Recognition (both hemispheres) started on 2014/08/29 12:55
/usr/local/brainvisa/share/brainvisa-share-4.4/nomenclature/syntax/graph.stx: found "" while waiting for "*BEGIN" (line 838) : , line 838
Traceback (most recent call last): File "/usr/local/brainvisa/scripts/sigraph/sulci_registration/independent_tag_with_registration.py", line 467, in <module>
if __name__ == '__main__' : main() File "/usr/local/brainvisa/scripts/sigraph/sulci_registration/independent_tag_with_registration.py", line 385, in main graph = io.load_graph(options.transfile, options.input_graphname) File "/usr/local/brainvisa/python/sulci/common/io.py", line 40, in load_graph return load_graphs(transfile, [graphname], label_mode)[0] File "/usr/local/brainvisa/python/sulci/common/io.py", line 35, in load_graphs ft.translate(g, label_mode, label_mode) TypeError: FoldLabelsTranslator.translate(): argument 1 has unexpected type 'Graph'
Any idea ??
Best regards
Yasser