I have a question regarding saving cortical fold graph with pyAims. I tried to read and then save the graph running the following simple code:
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graph = aims.read(input_graph_file)
Created arg file is identical to the original one (I compared them using a software), and the new graph automatically appears in the data browser.
However, when I try to view it with Anatomist, the representation is very different - head and MRI slices are added to the view, and also label colours disappear.
Should I change the write parameters, or should I somehow change Anatomist settings to get the original representation back after saving the graph with aims?
Thanks a lot,