giftiheader.h

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/* This software and supporting documentation are distributed by
 *     Institut Federatif de Recherche 49
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 *     91191 Gif-sur-Yvette cedex
 *     France
 *
 * This software is governed by the CeCILL-B license under
 * French law and abiding by the rules of distribution of free software.
 * You can  use, modify and/or redistribute the software under the
 * terms of the CeCILL-B license as circulated by CEA, CNRS
 * and INRIA at the following URL "http://www.cecill.info".
 *
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 * modify and redistribute granted by the license, users are provided only
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 * economic rights,  and the successive licensors  have only  limited
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#ifndef AIMS_IO_GIFTIHEADER_H
#define AIMS_IO_GIFTIHEADER_H
 
#include <aims/config/aimsdata_config.h>
#include <aims/data/pheader.h>
#include <aims/io/gifti.h>
 
 
template <typename T> class TimeTexture;
 
namespace carto
{
  class Mutex;
}
 
namespace aims
{
 
  class GiftiHeader : public PythonHeader
  {
  public:
    GiftiHeader( const std::string & name );
    /*GiftiHeader( int dimx, int dimy, int dimz, int dimt, float sx, float sy,
                 float sz, float st, const std::string & name );*/
    virtual ~GiftiHeader();
 
    const std::string& name() const;
    void setName( const std::string & fname ) { _name = fname; }
 
    const carto::Object options() const { return _options; }
    void setOptions( carto::Object opt ) { _options = opt; }
 
    virtual std::string extension() const;
 
    bool read();
    static std::string niftiRefFromAimsString( const std::string & space );
    static carto::Mutex & giftiMutex();
 
  private:
    template <int D, typename T>
    friend class GiftiMeshFormat;
    template <typename T>
    friend class GiftiTextureFormat;
 
    gifti_image* giftiImageBase();
    void giftiAddExternalTextures( gifti_image *gim, int & hdrtexda,
                                   carto::Object da_info );
    void giftiAddLabelTable( gifti_image *gim );
    static carto::Object giftiFindHdrDA( int & nda, carto::Object dainfo,
                                         const std::string & intent );
    static void giftiCopyMetaToGii( carto::Object dainf, giiDataArray *da );
    static void giftiSetTransformations( carto::Object cs, giiDataArray *da );
    template <typename T>
    void giftiAddTexture( gifti_image* gim, const std::vector<T> & tex );
    template <typename T>
    void giftiAddTexture( gifti_image* gim, const TimeTexture<T> & texture );
 
    //void giftiAddTexture( gifti_image* gim, const std::vector<Void> & tex );
    template <typename T>
    void giftiAddTextureObject( gifti_image* gim, carto::Object texture );
 
    std::string _name;
    carto::Object _options;
   };
 
}
 
#endif