Compute SUVR with ROI from MNI ( PET space )

Parameters

t1mri_nobias: T1 MRI Bias Corrected ( input )

ROI_reference_MNI: ROIReference MNI Mask ( input )

pet: PetSubject PET Mean ( input )

pet_smooth_fwhm: ListOf( Integer ) ( input )

inverse_field: SPM deformation field ( input )

coreg_MRI_to_PET_trm: Transformation T1MRI nobias to PET from coregister ( input )

ROI_reference_MRI_space: PetSubject MRI T1 ROI Reference ( output )

matter_mask_type: Choice ( input )

matter_mask: T1 MRI Nat GreyMask ( input )

ROI_reference_MRI_space_intersected: PetSubject MRI T1 ROI Reference ( output )

ROI_reference_PET_space: PetSubject ROI Reference ( output )

pet_SUVR: PetSubject PET SUVR ( output )

pet_SUVR_smoothed: PetSubject PET SUVR smoothed ( output )

intersect: Boolean ( input )

ROI_to_deformed_on_pet: PetSubject MRI T1 ROI Reference ( output )

Technical information

Toolbox : Nuclear Imaging

User level : 0

Identifier : computeSUVRPETPipeline

File name : brainvisa/toolboxes/nuclearimaging/processes/old/preprocessing/Intensity_Normalization/computeSUVRPETPipeline.py

Supported file formats :

t1mri_nobias :

NIFTI-1 image, NIFTI-1 image

ROI_reference_MNI :

NIFTI-1 image, NIFTI-1 image

pet :

NIFTI-1 image, NIFTI-1 image

inverse_field :

NIFTI-1 image, NIFTI-1 image

coreg_MRI_to_PET_trm :

Transformation matrix, Transformation matrix

ROI_reference_MRI_space :

NIFTI-1 image, NIFTI-1 image

matter_mask :

NIFTI-1 image, NIFTI-1 image

ROI_reference_MRI_space_intersected :

NIFTI-1 image, NIFTI-1 image

ROI_reference_PET_space :

NIFTI-1 image, NIFTI-1 image

pet_SUVR :

NIFTI-1 image, NIFTI-1 image

pet_SUVR_smoothed :

NIFTI-1 image, NIFTI-1 image

ROI_to_deformed_on_pet :

NIFTI-1 image, NIFTI-1 image