Import DaTscan

None

Parameters

database: Choice ( input )

spect_raw_dicoms_directory: Directory ( optional, input )

spect_raw_dicoms_files: ListOf( Any Type ) ( optional, input )

spect_recons_dicoms_directory: Directory ( optional, input )

spect_recons_dicoms_files: ListOf( Any Type ) ( optional, input )

ct_dicoms_directory: Directory ( optional, input )

ct_dicoms_files: ListOf( Any Type ) ( optional, input )

center: String ( optional, input )

subject: String ( optional, input )

acquisition: String ( optional, input )

SPECT_tracer: String ( optional, input )

SPECT_description: String ( optional, input )

ct_reconstruction_diameter: String ( optional, input )

spect_raw_dicoms_zip: SPECT rawdata dicom ( optional, output )

spect_dicoms_zip: SPECT RAW DICOM ( optional, output )

ct_dicoms_zip: CT raw dicom ( optional, output )

spect: SPECT native ( optional, output )

spect_acquisition_data: rawdata quality control ( optional, output )

ct: CT ( optional, output )

Technical information

Toolbox : Nuclear Imaging

User level : 0

Identifier : datscanImport

File name : brainvisa/toolboxes/nuclearimaging/processes/datscan/Import/datscanImport.py

Supported file formats :

spect_raw_dicoms_directory :

Directory, Directory

spect_raw_dicoms_files :

FreesurferIsin, ASCII results, AVI film, Aims bundles, Aims scalar features, Aperio svs, BMP image, BrainVISA session event, BrainVISA/Anatomist animation, Bucket, Bundle Selection Rules, Bval File, Bvec File, CSV file, Commissure coordinates, Config file, DEF Label Translation, DICOM image, Database Cache file, Directory, ECAT i image, ECAT v image, EPS file, FDF image, File, Filter file, FreesurferAvgCurv, FreesurferCurv, FreesurferCurvPial, FreesurferIsin, FreesurferLabel, FreesurferMGH, FreesurferMGZ, FreesurferParcellation, FreesurferPial, FreesurferSphereReg, FreesurferThickness, FreesurferWhite, GIF image, GIFTI file, GIS image, Graph, Graph and data, Gyri Model, HDF5 File, HTML, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, Hierarchy, Histo Analysis, Histogram, Info file, JPEG image, JSON file, Label Translation, Leica scn, Log file, MESH mesh, MINC image, MINC transformation matrix, MIRAX mrxs, MLP classifier, MNG image, MNI OBJ mesh, MP4 film, MPEG film, Matlab file, Matlab script, Minf, Moment Vector, NIFTI-1 image, Numpy Array, OGG film, PBM image, PDF File, PGM image, PLY mesh, PNG image, PPM image, PS file, Phase image, Plot results, Process execution event, Python Script, Quality Check Report, QuickTime film, Referential, SNNS pattern, SPM image, SQLite Database File, SVG file, SVM classifier, Sakura svslide, Selection, Series of BMP image, Series of FreesurferLabel, Series of GIF image, Series of GIS image, Series of JPEG image, Series of MNG image, Series of PBM image, Series of PGM image, Series of PNG image, Series of PPM image, Series of SPM image, Series of TIFF image, Series of TIFF(.tif) image, Series of XBM image, Series of XPM image, Sigraph Learner, Soma-Workflow workflow, Sparse Matrix, TIFF image, TIFF(.tif) image, TMS position file, TRI mesh, Template model, Template model domain, Text Data Table, Text file, Texture, Trackvis tracts, Transformation matrix, Tree, VIDA image, Ventana bif, XBM image, XLS file, XLSX file, XML, XPM image, Z compressed ECAT i image, Z compressed ECAT v image, Z compressed GIFTI file, Z compressed GIS image, Z compressed MESH mesh, Z compressed MNI OBJ mesh, Z compressed PLY mesh, Z compressed SPM image, Z compressed TRI mesh, Z compressed Texture, Z compressed VIDA image, ZIP file, Zeiss czi, bz2 Matlab file, gz Matlab file, gz compressed ECAT i image, gz compressed ECAT v image, gz compressed GIFTI file, gz compressed GIS image, gz compressed MESH mesh, gz compressed MINC image, gz compressed MNI OBJ mesh, gz compressed NIFTI-1 image, gz compressed PLY mesh, gz compressed PS file, gz compressed SPM image, gz compressed TAR archive, gz compressed TRI mesh, gz compressed Texture, gz compressed VIDA image, gzipped XML, pickle file, siRelax Fold Energy

spect_recons_dicoms_directory :

Directory, Directory

spect_recons_dicoms_files :

FreesurferIsin, ASCII results, AVI film, Aims bundles, Aims scalar features, Aperio svs, BMP image, BrainVISA session event, BrainVISA/Anatomist animation, Bucket, Bundle Selection Rules, Bval File, Bvec File, CSV file, Commissure coordinates, Config file, DEF Label Translation, DICOM image, Database Cache file, Directory, ECAT i image, ECAT v image, EPS file, FDF image, File, Filter file, FreesurferAvgCurv, FreesurferCurv, FreesurferCurvPial, FreesurferIsin, FreesurferLabel, FreesurferMGH, FreesurferMGZ, FreesurferParcellation, FreesurferPial, FreesurferSphereReg, FreesurferThickness, FreesurferWhite, GIF image, GIFTI file, GIS image, Graph, Graph and data, Gyri Model, HDF5 File, HTML, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, Hierarchy, Histo Analysis, Histogram, Info file, JPEG image, JSON file, Label Translation, Leica scn, Log file, MESH mesh, MINC image, MINC transformation matrix, MIRAX mrxs, MLP classifier, MNG image, MNI OBJ mesh, MP4 film, MPEG film, Matlab file, Matlab script, Minf, Moment Vector, NIFTI-1 image, Numpy Array, OGG film, PBM image, PDF File, PGM image, PLY mesh, PNG image, PPM image, PS file, Phase image, Plot results, Process execution event, Python Script, Quality Check Report, QuickTime film, Referential, SNNS pattern, SPM image, SQLite Database File, SVG file, SVM classifier, Sakura svslide, Selection, Series of BMP image, Series of FreesurferLabel, Series of GIF image, Series of GIS image, Series of JPEG image, Series of MNG image, Series of PBM image, Series of PGM image, Series of PNG image, Series of PPM image, Series of SPM image, Series of TIFF image, Series of TIFF(.tif) image, Series of XBM image, Series of XPM image, Sigraph Learner, Soma-Workflow workflow, Sparse Matrix, TIFF image, TIFF(.tif) image, TMS position file, TRI mesh, Template model, Template model domain, Text Data Table, Text file, Texture, Trackvis tracts, Transformation matrix, Tree, VIDA image, Ventana bif, XBM image, XLS file, XLSX file, XML, XPM image, Z compressed ECAT i image, Z compressed ECAT v image, Z compressed GIFTI file, Z compressed GIS image, Z compressed MESH mesh, Z compressed MNI OBJ mesh, Z compressed PLY mesh, Z compressed SPM image, Z compressed TRI mesh, Z compressed Texture, Z compressed VIDA image, ZIP file, Zeiss czi, bz2 Matlab file, gz Matlab file, gz compressed ECAT i image, gz compressed ECAT v image, gz compressed GIFTI file, gz compressed GIS image, gz compressed MESH mesh, gz compressed MINC image, gz compressed MNI OBJ mesh, gz compressed NIFTI-1 image, gz compressed PLY mesh, gz compressed PS file, gz compressed SPM image, gz compressed TAR archive, gz compressed TRI mesh, gz compressed Texture, gz compressed VIDA image, gzipped XML, pickle file, siRelax Fold Energy

ct_dicoms_directory :

Directory, Directory

ct_dicoms_files :

FreesurferIsin, ASCII results, AVI film, Aims bundles, Aims scalar features, Aperio svs, BMP image, BrainVISA session event, BrainVISA/Anatomist animation, Bucket, Bundle Selection Rules, Bval File, Bvec File, CSV file, Commissure coordinates, Config file, DEF Label Translation, DICOM image, Database Cache file, Directory, ECAT i image, ECAT v image, EPS file, FDF image, File, Filter file, FreesurferAvgCurv, FreesurferCurv, FreesurferCurvPial, FreesurferIsin, FreesurferLabel, FreesurferMGH, FreesurferMGZ, FreesurferParcellation, FreesurferPial, FreesurferSphereReg, FreesurferThickness, FreesurferWhite, GIF image, GIFTI file, GIS image, Graph, Graph and data, Gyri Model, HDF5 File, HTML, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, Hierarchy, Histo Analysis, Histogram, Info file, JPEG image, JSON file, Label Translation, Leica scn, Log file, MESH mesh, MINC image, MINC transformation matrix, MIRAX mrxs, MLP classifier, MNG image, MNI OBJ mesh, MP4 film, MPEG film, Matlab file, Matlab script, Minf, Moment Vector, NIFTI-1 image, Numpy Array, OGG film, PBM image, PDF File, PGM image, PLY mesh, PNG image, PPM image, PS file, Phase image, Plot results, Process execution event, Python Script, Quality Check Report, QuickTime film, Referential, SNNS pattern, SPM image, SQLite Database File, SVG file, SVM classifier, Sakura svslide, Selection, Series of BMP image, Series of FreesurferLabel, Series of GIF image, Series of GIS image, Series of JPEG image, Series of MNG image, Series of PBM image, Series of PGM image, Series of PNG image, Series of PPM image, Series of SPM image, Series of TIFF image, Series of TIFF(.tif) image, Series of XBM image, Series of XPM image, Sigraph Learner, Soma-Workflow workflow, Sparse Matrix, TIFF image, TIFF(.tif) image, TMS position file, TRI mesh, Template model, Template model domain, Text Data Table, Text file, Texture, Trackvis tracts, Transformation matrix, Tree, VIDA image, Ventana bif, XBM image, XLS file, XLSX file, XML, XPM image, Z compressed ECAT i image, Z compressed ECAT v image, Z compressed GIFTI file, Z compressed GIS image, Z compressed MESH mesh, Z compressed MNI OBJ mesh, Z compressed PLY mesh, Z compressed SPM image, Z compressed TRI mesh, Z compressed Texture, Z compressed VIDA image, ZIP file, Zeiss czi, bz2 Matlab file, gz Matlab file, gz compressed ECAT i image, gz compressed ECAT v image, gz compressed GIFTI file, gz compressed GIS image, gz compressed MESH mesh, gz compressed MINC image, gz compressed MNI OBJ mesh, gz compressed NIFTI-1 image, gz compressed PLY mesh, gz compressed PS file, gz compressed SPM image, gz compressed TAR archive, gz compressed TRI mesh, gz compressed Texture, gz compressed VIDA image, gzipped XML, pickle file, siRelax Fold Energy

spect_raw_dicoms_zip :

ZIP file, ZIP file

spect_dicoms_zip :

ZIP file, ZIP file

ct_dicoms_zip :

ZIP file, ZIP file

spect :

NIFTI-1 image, NIFTI-1 image

spect_acquisition_data :

JSON file, JSON file

ct :

NIFTI-1 image, NIFTI-1 image