04. Volume deformation

This step enables to apply the DISCO deformation, etimated in 02. Template building and saved in a displacement field in 03. Grid deformation, to volumes. The deformed volumes will be in each subject space.

Better option: Use Final deformation applied on volume instead of this process.

Otherwise, for this process:

1. Select the type of the data to be deformed.

2. Choose the study directory of the experiment.

Parameters

data_type: Choice ( input )

Type of data to be deformed.

study_dir: DISCO Study Dir ( input )

Study directory of the experiment

subjects_hierarchy: Save Subjects Hierarchy DISCO ( input )

data_in: ListOf( T1 MRI Bias Corrected ) ( input )

interp: Choice ( input )

voxels values resampling

vectorinterpolation: Choice ( input )

interpolation of vector field

inv_displacement_field: ListOf( FFD Field defData Inversed DISCO ) ( input )

data_out: ListOf( T1 MRI Bias Corrected DISCO ) ( output )

Technical information

Toolbox : Disco

User level : 2

Identifier : defGridData

File name : brainvisa/toolboxes/disco/processes/DISCO_components/defGridData.py

Supported file formats :

study_dir :

Directory, Directory

subjects_hierarchy :

Text file, Text file

data_in :

NIFTI-1 image, NIFTI-1 image

inv_displacement_field :

GIS image, GIS image

data_out :

NIFTI-1 image, NIFTI-1 image