compute Grey / White / CSF / Skull / Scalp Mask

None

Parameters

grey_native: T1 MRI tissue probability map ( output )

white_native: T1 MRI tissue probability map ( optional, output )

csf_native: T1 MRI tissue probability map ( optional, output )

skull_native: T1 MRI tissue probability map ( optional, output )

scalp_native: T1 MRI tissue probability map ( optional, output )

method: Choice ( input )

threshold: Float ( input )

grey_native_mask: T1 MRI Nat GreyMask ( output )

white_mask: Boolean ( input )

white_native_mask: T1 MRI Nat WhiteMask ( optional, output )

CSF_mask: Boolean ( input )

csf_native_mask: T1 MRI Nat CSFMask ( optional, output )

skull_mask: Boolean ( input )

skull_native_mask: T1 MRI Nat SkullMask ( optional, output )

scalp_mask: Boolean ( input )

scalp_native_mask: T1 MRI Nat ScalpMask ( optional, output )

need_to_do: Boolean ( input )

Technical information

Toolbox : Nuclear Imaging

User level : 0

Identifier : fdgGreyMask

File name : brainvisa/toolboxes/nuclearimaging/processes/old/preprocessing/fdgGreyMask.py

Supported file formats :

grey_native :

NIFTI-1 image, NIFTI-1 image

white_native :

NIFTI-1 image, NIFTI-1 image

csf_native :

NIFTI-1 image, NIFTI-1 image

skull_native :

NIFTI-1 image, NIFTI-1 image

scalp_native :

NIFTI-1 image, NIFTI-1 image

grey_native_mask :

NIFTI-1 image, NIFTI-1 image

white_native_mask :

NIFTI-1 image, NIFTI-1 image

csf_native_mask :

NIFTI-1 image, NIFTI-1 image

skull_native_mask :

NIFTI-1 image, NIFTI-1 image

scalp_native_mask :

NIFTI-1 image, NIFTI-1 image