[Volume] Morphological Opening

Morphological opening (chamfer)

Parameters

Input_Volume: 3D Volume ( input )

Source volume

• Volume of S16

Output_Directory: Directory ( optional, input )

Output_Volume: 3D Volume ( output )

Destination volume

• Volume of S16

Radius: Float ( input )

Radius of the structuring element

Distance_Mask_X: Integer ( optional, input )

X size of the distance mask [default=3]

Distance_Mask_Y: Integer ( optional, input )

Y size of the distance mask [default=3]

Distance_Mask_Z: Integer ( optional, input )

Z size of the distance mask [default=3]

Chamfer_M_Factor: Integer ( optional, input )

Chamfer multiplication factor [default=50]

Reader: String ( optional, input )

Force specific format reader

Technical information

Toolbox : Bioprocessing

User level : 3

Identifier : BasicOpening

File name : brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Aims/BasicOpening.py

Supported file formats :

Input_Volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_Directory :

Directory, Directory

Output_Volume :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image