Connected component extraction

None

Parameters

Input_Image: 3D Volume ( input )
Connectivity: Choice ( optional, input )
Size: Integer ( optional, input )
Kept: Integer ( optional, input )
Binary_Mode: Boolean ( optional, input )
Type: Choice ( optional, input )
Debug_Level: Integer ( optional, input )
Verbose: Boolean ( optional, input )
Output_Directory: Directory ( optional, output )
Output_Image: 3D Volume ( output )

Technical information

Toolbox : BrainRAT

User level : 3

Identifier : ConnectedComponentExtraction

File name : brainvisa/toolboxes/brainrat/processes/toolbox/ConnectedComponentExtraction.py

Supported file formats :

Input_Image :
gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image
Output_Directory :
Directory, Directory
Output_Image :
gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image