Free form deformation transformation application

None

Parameters

Input_3dImage: 3D Volume ( input )
Input_Displacement_Field: 3D Volume ( input )
Input_Motion: Transformation matrix ( optional, input )
Interpolation_Method: Choice ( input )
Borders_Interpolation_Method: Choice ( input )
Old_Mode: Choice ( input )
Input_Reference_Volume: 3D Volume ( optional, input )
Output_VoxelSize_X: Float ( optional, input )
Output_VoxelSize_Y: Float ( optional, input )
Output_VoxelSize_Z: Float ( optional, input )
Output_Dimension_X: Integer ( optional, input )
Output_Dimension_Y: Integer ( optional, input )
Output_Dimension_Z: Integer ( optional, input )
Output_Directory: Directory ( optional, output )
Output_Grid: Bucket ( optional, output )
Output_3dImage_Compression: 3D Volume ( optional, output )
Output_3dImage: 3D Volume ( output )

Technical information

Toolbox : BrainRAT

User level : 3

Identifier : FFDTransformationApplication

File name : brainvisa/toolboxes/brainrat/processes/toolbox/registration/FFDTransformationApplication.py

Supported file formats :

Input_3dImage :
gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image
Input_Displacement_Field :
GIS image, GIS image
Input_Motion :
Transformation matrix, Transformation matrix
Input_Reference_Volume :
gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image
Output_Directory :
Directory, Directory
Output_Grid :
Bucket, Bucket
Output_3dImage_Compression :
gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image
Output_3dImage :
gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image