None
t1mri_bias_corrected: T1 MRI Bias Corrected ( input )
pet_mean: PET mean ( input )
voi_reference_space: Choice ( input )
voi_reference: reference region mask ( input )
voi_reference_translation: reference region mask translation ( input )
atrophy_correction: Boolean ( input )
tissue_mask_class: Choice ( input )
matter_mask: T1 MRI tissue probability mask ( input )
forward_field: SPM deformation field ( input )
inverse_field: SPM deformation field ( input )
coregister_trm: T1MRI to PET transformation file ( input )
output_space: Choice ( input )
voi_reference_in_t1mri: reference region mask ( output )
voi_reference_intersected_in_t1mri: reference region mask ( output )
output_voi_reference: reference region mask ( output )
pet_mean_in_t1mri: PET mean ( output )
output_pet_mean: PET mean ( output )
pet_parametric: PET parametric ( output )
pet_parametric_data: PET parametric data ( output )
smoothed_pet_mean: Boolean ( input )
pet_mean_smoothed_fwhm: ListOf( Integer ) ( optional, input )
output_pet_mean_smoothed: PET mean smoothed ( optional, output )
smoothed_pet_parametric: Boolean ( input )
pet_parametric_smoothed_fwhm: ListOf( Integer ) ( optional, input )
pet_parametric_smoothed: PET parametric smoothed ( optional, output )
Toolbox : Nuclear Imaging
User level : 0
Identifier :
IntensityNormalisationPETPipeline_spm12
File name :
brainvisa/toolboxes/nuclearimaging/processes/subpipelines/IntensityNormalisationPETPipeline_spm12.py
Supported file formats :
t1mri_bias_corrected :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagepet_mean :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagevoi_reference :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagevoi_reference_translation :JSON file, JSON filematter_mask :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imageforward_field :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imageinverse_field :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagecoregister_trm :Transformation matrix, Transformation matrixvoi_reference_in_t1mri :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagevoi_reference_intersected_in_t1mri :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imageoutput_voi_reference :NIFTI-1 image, NIFTI-1 imagepet_mean_in_t1mri :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imageoutput_pet_mean :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagepet_parametric :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagepet_parametric_data :JSON file, JSON fileoutput_pet_mean_smoothed :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 imagepet_parametric_smoothed :gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image