PVC pipeline

None

Parameters

PVC_method: Choice ( input )

PET_mean: PET mean ( input )

PET_PVC: PET mean ( output )

MRI_to_PET_transformation: T1MRI to PET transformation file ( input )

MRI_nat_intracranial_labels: T1 MRI intracranial labels ( input )

intracranial_native_translation: T1 MRI intracranial labels translation ( input )

PET_intracranial_labels: T1 MRI intracranial labels ( output )

FWHM: String ( input )

FWHM_informations: FWHM informations ( optional, input )

Corrected_GTM_based_Uptake: GTM PVC based corrected images data ( optional, output )

Technical information

Toolbox : Nuclear Imaging

User level : 0

Identifier : PVCPipeline

File name : brainvisa/toolboxes/nuclearimaging/processes/PVC/PVCPipeline.py

Supported file formats :

PET_mean :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

PET_PVC :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

MRI_to_PET_transformation :

Transformation matrix, Transformation matrix

MRI_nat_intracranial_labels :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

intracranial_native_translation :

JSON file, JSON file

PET_intracranial_labels :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

FWHM_informations :

CSV file, CSV file

Corrected_GTM_based_Uptake :

CSV file, CSV file