Quality control for Pet Only Pipeline

None

Parameters

template_type: Choice ( input )

template: PetSubject PET MNI Template smoothed ( input )

pet_MNI: PetSubject PET MNI ( input )

pet_MNI_smoothed: PetSubject PET MNI smoothed ( optional, input )

roiReference: ROIReference MNI Mask ( optional, input )

pet_SUVR_MNI: PetSubject PET MNI parametric ( optional, input )

pet_SUVR_MNI_smoothed: PetSubject PET MNI parametric smoothed ( optional, input )

region_type: Choice ( input )

volume_stat_MNI: ROIForStatistic MNI Mask ( optional, input )

disable_stat_panel: Boolean ( optional, input )

stat_in_volume: PetSubject MNI SUVR Stats in label ( optional, input )

labels_threshold: Thresholds for statistic label ( optional, input )

normalization_QC: quality control of PET normalization ( output )

MNI_roi_QC: quality control of ROI mask ( output )

QC_report: PDF Board ( optional, output )

Technical information

Toolbox : Nuclear Imaging

User level : 0

Identifier : PetOnlyPipeline_QC

File name : brainvisa/toolboxes/nuclearimaging/processes/old/preprocessing/Intensity_Normalization/PetOnlyPipeline_QC.py

Supported file formats :

template :

NIFTI-1 image, NIFTI-1 image

pet_MNI :

NIFTI-1 image, NIFTI-1 image

pet_MNI_smoothed :

NIFTI-1 image, NIFTI-1 image

roiReference :

NIFTI-1 image, NIFTI-1 image

pet_SUVR_MNI :

NIFTI-1 image, NIFTI-1 image

pet_SUVR_MNI_smoothed :

NIFTI-1 image, NIFTI-1 image

volume_stat_MNI :

NIFTI-1 image, NIFTI-1 image

stat_in_volume :

Text file, Text file

labels_threshold :

Text file, Text file

normalization_QC :

Text file, Text file

MNI_roi_QC :

Text file, Text file

QC_report :

PDF File, PDF File