SPCN - 02 - Model application

None

Parameters

source_image: 3D Volume ( input )

Wt: Numpy Array ( input )

Ht: Numpy Array ( input )

stain_num: Integer ( input )

iteration: Integer ( input )

thresh: Float ( input )

lambda1: Float ( input )

lambda2: Float ( input )

fast_mode: Boolean ( input )

output: 3D Volume ( output )

Technical information

Toolbox : Bioprocessing

User level : 3

Identifier : SPCN-02-model_application

File name : brainvisa/toolboxes/bioprocessing/processes/research/projects/color_normalization/SPCN-02-model_application.py

Supported file formats :

source_image :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Wt :

Numpy Array, Numpy Array

Ht :

Numpy Array, Numpy Array

output :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image