spm12 - Pairwise longitudinal registration

None

Parameters

modality: Choice ( input )

time_1_volumes: ListOf( Raw T1 MRI ) ( input )

time_2_volumes: ListOf( Raw T1 MRI ) ( input )

time_difference: ListOf( Float ) ( input )

noise_estimate: Choice ( input )

noise_estimate_value: Matrix ( optional, input )

warping_regularisation: ListOf( Float ) ( input )

bias_regularisation: Float ( input )

customs_outputs: Boolean ( input )

save_MPA: Boolean ( input )

MPA: ListOf( T1 MRI mid-point average ) ( output )

save_jacobian_rate: Boolean ( input )

jacobian_rate: ListOf( Jacobian determinant ) ( optional, output )

save_divergence_rate: Boolean ( input )

divergence_rate: ListOf( Divergence map ) ( output )

save_deformation_fields: Boolean ( input )

time_1_deformation_fields: ListOf( SPM deformation field ) ( optional, output )

time_2_deformation_fields: ListOf( SPM deformation field ) ( optional, output )

batch_location: Matlab SPM script ( output )

Technical information

Toolbox : SPM

User level : 0

Identifier : SPM12Pairwise

File name : brainvisa/toolboxes/spm/processes/spm12/tools/longitudinal_registration/SPM12Pairwise.py

Supported file formats :

time_1_volumes :

NIFTI-1 image, MINC image, NIFTI-1 image, SPM image

time_2_volumes :

NIFTI-1 image, MINC image, NIFTI-1 image, SPM image

MPA :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

jacobian_rate :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

divergence_rate :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

time_1_deformation_fields :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

time_2_deformation_fields :

gz compressed NIFTI-1 image, NIFTI-1 image, gz compressed NIFTI-1 image

batch_location :

Matlab script, Matlab script