SubvolumeStacking

This process enables to concatenate volumes (along Z axis) that have been individually stacked by running the processes 01. image - stacking individual slices or 02. image - Individualizing and stacking multiple slices. Make sure the volumes have the horizontal and vertical dimensions.

Parameters

Input_ListOf_3dImage: ListOf( 3D Volume ) ( input )

Click on .
Select the volumes to be concatenated by holding down on the control button on your keyboard (Ctrl).

Output_3dImage: 3D Volume ( output )

Click on .
Specify the output directory and enter the output file name.

Technical information

Toolbox : BrainRAT

User level : 0

Identifier : SubvolumeStacking

File name : brainvisa/toolboxes/brainrat/processes/toolbox/SubvolumeStacking.py

Supported file formats :

Input_ListOf_3dImage :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Output_3dImage :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image