Sulcal Lines Extraction With Options

None

Parameters

graph: Labelled Cortical folds graph ( input )

side: Choice ( input )

white_mesh: Hemisphere White Mesh ( input )

grey_white_input: Morphologist Grey White Mask ( input )

sulcus_identification: Choice ( input )

labels_translation_map: Label translation ( input )

graph_label_basins: Graph Label Translation ( output )

file_correspondance_constraint: Constraint coordinates values ( input )

mri: T1 MRI Bias Corrected ( input )

bucket_label_type: Choice ( input )

white_sulcalines: hemisphere Sulcal Lines texture ( output )

basin_min_size: Float ( input )

constraint_weight: Integer ( input )

method: Integer ( input )

Technical information

Toolbox : Cortical Surface

User level : 2

Identifier : SulcalinesExtraction_options

File name : brainvisa/toolboxes/cortical_surface/processes/miscellaneous/experimental/SulcalinesExtraction_options.py

Supported file formats :

graph :

Graph and data, Graph and data

white_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

grey_white_input :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

labels_translation_map :

Label Translation, Label Translation

graph_label_basins :

Text file, Text file

file_correspondance_constraint :

Text file, Text file

mri :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

white_sulcalines :

GIFTI file, GIFTI file, Texture