Volumic Sulcus SPAM

None

Parameters

graphs: ListOf( Cortical folds graph ) ( input )

mri: 3D Volume ( optional, input )

SPAM: 3D Volume ( output )

smoothing: Choice ( input )

smoothing_parameter: Float ( input )

bucket: Choice ( input )

custom_buckets: String ( optional, input )

label_translation: Label translation ( optional, input )

int_to_label_translation: Log file ( optional, output )

label_attributes: Choice ( input )

custom_label_attributes: String ( optional, input )

node_edge_types: Choice ( input )

custom_node_edge_types: String ( optional, input )

label_values: String ( optional, input )

Technical information

Toolbox : Morphologist

User level : 1

Identifier : volumicSulcusSPAM

File name : brainvisa/toolboxes/morphologist/processes/morphometry/Sulci/SPAM/volumicSulcusSPAM.py

Supported file formats :

graphs :

Graph and data, Graph and data

mri :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

SPAM :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image

label_translation :

Label Translation, Label Translation

int_to_label_translation :

Log file, Log file