[Volume] Block Matching

None

Paramètres

Input_Reference_Volume: Volume 3D ( entrée )

Input_Reference_Mask: Volume 3D ( optional, entrée )

Channel_Reference: Choice ( optional, input )

Input_ToRegister_Volume: Volume 3D ( entrée )

Input_ToRegister_Mask: Volume 3D ( optional, entrée )

Channel_ToRegister: Choice ( optional, input )

Input_Init_Motion: Transformation matrix ( optional, entrée )

Write_Motion: Booléen ( optional, input )

Output_Motion_Directory: Répertoire ( optional, entrée )

Output_Motion: Transformation matrix ( optional, sortie )

Write_Registered_Volume: Booléen ( optional, input )

Output_Volume_Directory: Répertoire ( optional, entrée )

Output_Registered_Volume: Volume 3D ( optional, sortie )

Transformation_Type: Choice ( optional, input )

Start_Level: Entier ( optional, input )

Stop_Level: Entier ( optional, input )

Block_Size_X: Entier ( optional, input )

Block_Size_Y: Entier ( optional, input )

Block_Size_Z: Entier ( optional, input )

Invert_Output_Motion: Booléen ( optional, input )

Background_Value: String ( optional, input )

Pct_MaxVar: Réel ( optional, input )

Min_MaxVar: Réel ( optional, input )

Pct_MinVar: Réel ( optional, input )

Correlation_Th: Réel ( optional, input )

Low_Ref_Th: Réel ( optional, input )

High_Ref_Th: Réel ( optional, input )

Low_TR_Th: Réel ( optional, input )

High_TR_Th: Réel ( optional, input )

Max_Iter: Entier ( optional, input )

Info: Booléen ( optional, input )

Debug_Level: Entier ( optional, input )

Verbose: Booléen ( optional, input )

Informations techniques

Toolbox : Bioprocessing

Niveau d'utilisateur : 3

Identifiant : BasicBlockMatching

Nom de fichier : brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicBlockMatching.py

Supported file formats :

Input_Reference_Volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_Reference_Mask :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_ToRegister_Volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_ToRegister_Mask :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_Init_Motion :

Transformation matrix, Transformation matrix

Output_Motion_Directory :

Répertoire, Répertoire

Output_Motion :

Transformation matrix, Transformation matrix

Output_Volume_Directory :

Répertoire, Répertoire

Output_Registered_Volume :

gz compressed NIFTI-1 image, BMP image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image