Gyral Parcellation

None

Parameters

Side: Choice ( input )

Projection: Choice ( input )

Parcellation: Choice ( input )

Lgraph: Labelled Cortical folds graph ( optional, input )

Rgraph: Labelled Cortical folds graph ( optional, input )

mri_corrected: T1 MRI Bias Corrected ( input )

sulcus_identification: Choice ( input )

translation: Label translation ( input )

gyri_model: Gyri Model ( input )

sulci_label_to_sulci_name: Sulci To White Texture Translation ( output )

left_gyri_label_to_gyri_name: Gyri To White Texture Translation ( output )

right_gyri_label_to_gyri_name: Gyri To White Texture Translation ( output )

left_white_mesh: Left Hemisphere White Mesh ( optional, input )

right_white_mesh: Right Hemisphere White Mesh ( optional, input )

left_hemi_mesh: Left Hemisphere Mesh ( optional, input )

right_hemi_mesh: Right Hemisphere Mesh ( optional, input )

left_grey_white: Left Grey White Mask ( optional, input )

right_grey_white: Right Grey White Mask ( optional, input )

left_white_sulci: Sulci White Texture ( optional, output )

right_white_sulci: Sulci White Texture ( optional, output )

left_white_gyri: Gyri White Texture ( optional, output )

right_white_gyri: Gyri White Texture ( optional, output )

left_gyri_graph: Gyri Graph ( optional, output )

right_gyri_graph: Gyri Graph ( optional, output )

left_white_gyri_volume: Gyri White Volume ( optional, output )

right_white_gyri_volume: Gyri White Volume ( optional, output )

Technical information

Toolbox : Cortical Surface

User level : 2

Identifier : 2DWhiteMatterParcellation

File name : brainvisa/toolboxes/cortical_surface/processes/miscellaneous/oldProcesses/2DWhiteMatterParcellation.py

Supported file formats :

Lgraph :

Graph and data, Graph and data

Rgraph :

Graph and data, Graph and data

mri_corrected :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

translation :

Label Translation, Label Translation

gyri_model :

Gyri Model, Gyri Model

sulci_label_to_sulci_name :

Text file, Text file

left_gyri_label_to_gyri_name :

Text file, Text file

right_gyri_label_to_gyri_name :

Text file, Text file

left_white_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

right_white_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

left_hemi_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

right_hemi_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

left_grey_white :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

right_grey_white :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

left_white_sulci :

GIFTI file, GIFTI file, Texture

right_white_sulci :

GIFTI file, GIFTI file, Texture

left_white_gyri :

GIFTI file, GIFTI file, Texture

right_white_gyri :

GIFTI file, GIFTI file, Texture

left_gyri_graph :

Graph and data, Graph and data

right_gyri_graph :

Graph and data, Graph and data

left_white_gyri_volume :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image

right_white_gyri_volume :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image