ApplyTransformationInReferential

None

Parameters

Source_Volume: 3D Volume ( input )

Target_Volume: 3D Volume ( input )

Source_Referential: Choice ( optional, input )

Target_Referential: Choice ( optional, input )

Transformation: Transformation matrix ( optional, input )

Invert_Transformation: Boolean ( input )

Generate_Transformation: Boolean ( input )

Output_Transformation: Transformation matrix ( optional, output )

Generate_Volume: Boolean ( input )

Output_Volume: 3D Volume ( optional, output )

Technical information

Toolbox : Bioprocessing

User level : 2

Identifier : ApplyTransformationInReferential

File name : brainvisa/toolboxes/bioprocessing/processes/platform/MIRCen/registration/ApplyTransformationInReferential.py

Supported file formats :

Source_Volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Target_Volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Transformation :

Transformation matrix, Matlab file, Transformation matrix

Output_Transformation :

Transformation matrix, Transformation matrix

Output_Volume :

gz compressed NIFTI-1 image, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIF image, GIS image, JPEG image, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, TIFF image, TIFF(.tif) image, VIDA image, XBM image, XPM image, gz compressed MINC image, gz compressed NIFTI-1 image