FSL Normalization to AIMS converter

None

Parameters

read: FSL transformation ( input )

source_volume: 4D Volume ( input )

write: Transform Raw T1 MRI to Talairach-MNI template-SPM ( output )

registered_volume: 4D Volume ( optional, input )

standard_template: Choice ( input )

set_transformation_in_source_volume: Boolean ( input )

Technical information

Toolbox : Morphologist

User level : 0

Identifier : FSLnormalizationToAims

File name : brainvisa/toolboxes/morphologist/processes/converters/FSLnormalizationToAims.py

Supported file formats :

read :

Matlab file, Matlab file

source_volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

write :

Transformation matrix, Transformation matrix

registered_volume :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image