Defined in file : brainvisa/toolboxes/constellation/types/constellation_types.py
Anatomist clusters inspect tool
Anatomist Show Connectivity Profiles of a Specific Cortical Element
Anatomist view connectivity
Anatomist view Connectivity ROI Texture
Anatomist view Connectivity ROI Texture, Atlas pipeline variant
Anatomist view reorder matrix from labeled texture
Average Silhouette Width
Clustering From Reduced Individual Matrix
Clustering scores
Concatenate the ROI segmentations on the same mesh
Constellation Cleaner
Constellation Cutter
Constellation Individual Clusters from atlas pipeline - FSL connectome
Constellation Individual Clusters from atlas pipeline - MRtrix
Constellation Optimal Clustering From Atlas
Constellation Optimal Clustering From Silhouette
Dice Index
Extract clusters
Group Regions Filtering
Individual clusters from atlas
Individual High Connectivity Regions
Individual Regions Filtering
Reduced Individual Matrices From Group Regions
Reduced Individual Matrix From Filtered Reduced Profile
Write a different measures in csv file
Write connectivity matrix as CSV File
BrainVISA texture formats
GIFTI file
gz compressed GIFTI file
gz compressed Texture
Texture
Z compressed GIFTI file
Z compressed Texture
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/{gyrus}/smooth{smoothing}/<group_of_subjects>_<method>_<studyname>_<gyrus>_filtered_watershed_{smallerlength}to{greaterlength}mm
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/{gyrus}/smooth{smoothing}/<group_of_subjects>_<method>_<studyname>_<gyrus>_watershed_{smallerlength}to{greaterlength}mm
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/{gyrus}/smooth{smoothing}/<group_of_subjects>_<method>_<studyname>_<gyrus>_{sid}_clustering_{smallerlength}to{greaterlength}mm
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/{gyrus}/smooth{smoothing}/optimal/<group_of_subjects>_<method>_<studyname>_<gyrus>_{sid}_{optimal}_clustering_{smallerlength}to{greaterlength}mm
{center}/group_analysis/{group_of_subjects}/connectivity_clustering/{method}/{studyname}/desikan/smooth{smoothing}/<group_of_subjects>_<method>_<studyname>_bh_{sid}_{optimal}_clustering_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/clustering/smooth{smoothing}/<subject>_<studyname>_<gyrus>_sum_values_from_region_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/clustering/smooth{smoothing}/<subject>_<studyname>_<gyrus>_spread_value_on_region_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/clustering/smooth{smoothing}/<subject>_<studyname>_<gyrus>_watershed_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/clustering/smooth{smoothing}/<subject>_<studyname>_<gyrus>_filtered_watershed_{smallerlength}to{greaterlength}mm
{center}/{subject}/diffusion/{acquisition}/{analysis}/{tracking_session}/connectivity_parcellation/{method}/{studyname}/{gyrus}/clustering/smooth{smoothing}/<subject>_<studyname>_<gyrus>_clustering_{smallerlength}to{greaterlength}mm
center , group_of_subjects , method , studyname , gyrus , smoothing , smallerlength , greaterlength , roi_filtered , sid , optimal , subject , acquisition , analysis , tracking_session , measure , roi_autodetect , step_time