[Volume] Block Matching

None

Paramètres

Input_Reference_Volume: Volume 3D ( entrée )

Input_Reference_Mask: Volume 3D ( optional, entrée )

Channel_Reference: Choice ( optional, input )

Input_ToRegister_Volume: Volume 3D ( entrée )

Input_ToRegister_Mask: Volume 3D ( optional, entrée )

Channel_ToRegister: Choice ( optional, input )

Input_Init_Motion: Transformation matrix ( optional, entrée )

Write_Motion: Booléen ( optional, input )

Output_Transformation_Directory: Répertoire ( optional, entrée )

Output_Transformation: Transformation matrix ( optional, sortie )

Write_Registered_Volume: Booléen ( optional, input )

Output_Volume_Directory: Répertoire ( optional, entrée )

Output_Registered_Volume: Volume 3D ( optional, sortie )

Transformation_Type: Choice ( optional, input )

Start_Level: Entier ( optional, input )

Stop_Level: Entier ( optional, input )

Block_Size_X: Entier ( optional, input )

Block_Size_Y: Entier ( optional, input )

Block_Size_Z: Entier ( optional, input )

Invert_Output_Transformation: Booléen ( optional, input )

Background_Value: String ( optional, input )

Pct_MaxVar: Réel ( optional, input )

Min_MaxVar: Réel ( optional, input )

Pct_MinVar: Réel ( optional, input )

Correlation_Th: Réel ( optional, input )

Low_Ref_Th: Réel ( optional, input )

High_Ref_Th: Réel ( optional, input )

Low_TR_Th: Réel ( optional, input )

High_TR_Th: Réel ( optional, input )

Max_Iter: Entier ( optional, input )

Info: Booléen ( optional, input )

Debug_Level: Entier ( optional, input )

Verbose: Booléen ( optional, input )

Informations techniques

Toolbox : Bioprocessing

Niveau d'utilisateur : 3

Identifiant : BasicBlockMatching

Nom de fichier : brainvisa/toolboxes/bioprocessing/processes/research/toolbox/basic/Bio/BasicBlockMatching.py

Supported file formats :

Input_Reference_Volume :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_Reference_Mask :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_ToRegister_Volume :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_ToRegister_Mask :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Input_Init_Motion :

Transformation matrix, Transformation matrix

Output_Transformation_Directory :

Répertoire, Répertoire

Output_Transformation :

Transformation matrix, Transformation matrix

Output_Volume_Directory :

Répertoire, Répertoire

Output_Registered_Volume :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image