Normalize intensities of a collection of T1 MRIs

Create normalized MRI from histogram analysis computed in Morphologist process.

Paramètres

study_dir: DISCO Study Dir ( optional, entrée )

subjects_hierarchy: Save Subjects Hierarchy DISCO ( optional, entrée )

Lgraph: ListOf( Labelled Cortical folds graph ) ( optional, input )

t1mri_nobias: ListOf( IRM T1 Biais Corrigé ) ( input )

histo_analysis: ListOf( Analyse d'histogramme ) ( input )

method: Choice ( input )

t1mri_normalized: ListOf( T1 MRI Bias Corrected Normalized ) ( output )

Informations techniques

Toolbox : Disco

Niveau d'utilisateur : 0

Identifiant : IntensityNormalization

Nom de fichier : brainvisa/toolboxes/disco/processes/Tools/IntensityNormalization.py

Supported file formats :

study_dir :

Répertoire, Répertoire

subjects_hierarchy :

Text file, Text file

Lgraph :

Graph and data, Graph and data

t1mri_nobias :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

histo_analysis :

Histo Analysis, Histo Analysis

t1mri_normalized :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image