[Reference Segmentation] Convert and merge

None

Paramètres

input_axial: ROI ( optional, entrée )

input_coronal: ROI ( optional, entrée )

input_sagittal: ROI ( optional, entrée )

input_hierarchy: Hiérarchie ( entrée )

input_mri: Volume 3D ( optional, entrée )

output_directory: Répertoire ( optional, entrée )

output_format: Choice ( optional, input )

write_conversion: Booléen ( input )

write_merged: Booléen ( input )

write_mask: Booléen ( input )

output_axial: Volume 3D ( optional, sortie )

output_coronal: Volume 3D ( optional, sortie )

output_sagittal: Volume 3D ( optional, sortie )

output_merged: Volume 3D ( sortie )

output_mask_axial: Volume 3D ( optional, sortie )

output_mask_coronal: Volume 3D ( optional, sortie )

output_mask_sagittal: Volume 3D ( optional, sortie )

output_mask_merged: Volume 3D ( sortie )

Informations techniques

Toolbox : Primatologist

Niveau d'utilisateur : 2

Identifiant : convertAndMergeReference

Nom de fichier : brainvisa/toolboxes/primatologist/processes/tools/convertAndMergeReference.py

Supported file formats :

input_axial :

Graph and data, Graph and data

input_coronal :

Graph and data, Graph and data

input_sagittal :

Graph and data, Graph and data

input_hierarchy :

Hiérarchie, Hiérarchie

input_mri :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

output_directory :

Répertoire, Répertoire

output_axial :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_coronal :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_sagittal :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_merged :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_mask_axial :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_mask_coronal :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_mask_sagittal :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_mask_merged :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image