Swap and flip hemispheres

This is for the purpose of using left-right flipped brains in your DISCO or DISCO+DARTEL registration, e.g. if you aim for a symmetric template.

0. Run 00. Copy DISCO/DARTEL inputs in a compatible format before using Flip hemisphere.

1. Select the Lgraph of your DISCO Analysis to flip.

Your flipped subjects will be saved as new subjects and can now be used for your registration.

Paramètres

Lgraph: ListOf( Labelled Cortical folds graph ) ( input )

Rgraph: ListOf( Labelled Cortical folds graph ) ( input )

t1mri_nobias: ListOf( IRM T1 Biais Corrigé ) ( input )

Lgrey_white: ListOf( Morphologist Grey White Mask ) ( input )

Rgrey_white: ListOf( Morphologist Grey White Mask ) ( input )

Lwhite_mesh: ListOf( Maillage de la matière blanche d'un hémisphère ) ( input )

Rwhite_mesh: ListOf( Maillage de la matière blanche d'un hémisphère ) ( input )

Lpial_mesh: ListOf( Maillage d'un hémisphère ) ( input )

Rpial_mesh: ListOf( Maillage d'un hémisphère ) ( input )

new_Lgraph: ListOf( Labelled Cortical folds graph ) ( output )

new_Rgraph: ListOf( Labelled Cortical folds graph ) ( output )

new_t1mri_nobias: ListOf( IRM T1 Biais Corrigé ) ( output )

new_Lgrey_white: ListOf( Morphologist Grey White Mask ) ( output )

new_Rgrey_white: ListOf( Morphologist Grey White Mask ) ( output )

new_Lwhite_mesh: ListOf( Maillage de la matière blanche d'un hémisphère ) ( output )

new_Rwhite_mesh: ListOf( Maillage de la matière blanche d'un hémisphère ) ( output )

new_Lpial_mesh: ListOf( Maillage d'un hémisphère ) ( output )

new_Rpial_mesh: ListOf( Maillage d'un hémisphère ) ( output )

Informations techniques

Toolbox : Disco

Niveau d'utilisateur : 0

Identifiant : flip_hemi

Nom de fichier : brainvisa/toolboxes/disco/processes/Preprocessing/flip_hemi.py

Supported file formats :

Lgraph :

Graph and data, Graph and data

Rgraph :

Graph and data, Graph and data

t1mri_nobias :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

Lgrey_white :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

Rgrey_white :

gz compressed NIFTI-1 image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

Lwhite_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

Rwhite_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

Lpial_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

Rpial_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

new_Lgraph :

Graph and data, Graph and data

new_Rgraph :

Graph and data, Graph and data

new_t1mri_nobias :

NIFTI-1 image, NIFTI-1 image

new_Lgrey_white :

NIFTI-1 image, NIFTI-1 image

new_Rgrey_white :

NIFTI-1 image, NIFTI-1 image

new_Lwhite_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

new_Rwhite_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

new_Lpial_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh

new_Rpial_mesh :

GIFTI file, GIFTI file, MESH mesh, MNI OBJ mesh, PLY mesh, TRI mesh