Normalisation d'anatomie (basée sur AimsMIRegister)

None

Paramètres

anatomy_data: Raw T1 MRI ( entrée )

anatomical_template: anatomical Template ( entrée )

transformation_to_template: Transformation matrix ( optional, sortie )

normalized_anatomy_data: Raw T1 MRI ( optional, sortie )

transformation_to_MNI: Transform Raw T1 MRI to Talairach-MNI template-SPM ( optional, sortie )

transformation_to_ACPC: Transform Raw T1 MRI to Talairach-AC/PC-Anatomist ( optional, sortie )

mni_to_acpc: Transformation matrix ( optional, entrée )

smoothing: Réel ( input )

Informations techniques

Toolbox : Morphologist

Niveau d'utilisateur : 2

Identifiant : normalization_aimsmiregister

Nom de fichier : brainvisa/toolboxes/morphologist/processes/registration/normalization_aimsmiregister.py

Supported file formats :

anatomy_data :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

anatomical_template :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

transformation_to_template :

Transformation matrix, Transformation matrix

normalized_anatomy_data :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

transformation_to_MNI :

Transformation matrix, Transformation matrix

transformation_to_ACPC :

Transformation matrix, Transformation matrix

mni_to_acpc :

Transformation matrix, Transformation matrix