Graphe de sillons corticaux

None

Paramètres

input_topology: CSF+GREY Mask ( entrée )

input_split_brain: Séparation du masque du cerveau ( optional, entrée )

input_skeleton: Cortex Skeleton ( entrée )

input_roots: Cortex Catchment Bassins ( entrée )

input_grey_white: Grey White Mask ( entrée )

input_white_mesh: Maillage de la matière blanche d'un hémisphère ( entrée )

input_pial_mesh: Maillage d'un hémisphère ( entrée )

input_commissure: Commissure coordinates ( optional, entrée )

input_transform: P:Subject to Talairach-AC/PC-Anatomist Transformation ( entrée )

graph_version: Choice ( input )

compute_fold_meshes: Booléen ( input )

allow_multithreading: Booléen ( input )

write_mid_interface: Booléen ( optional, input )

output_sulci_graph: Graphe de sillons corticaux ( sortie )

output_sulci_voronoi: Voronoï de sillons ( sortie )

output_mid_interface: Grey White Mid-Interface Volume ( optional, sortie )

Informations techniques

Toolbox : Primatologist

Niveau d'utilisateur : 0

Identifiant : primate_CorticalFoldsGraph

Nom de fichier : brainvisa/toolboxes/primatologist/processes/blocks/primate_CorticalFoldsGraph.py

Supported file formats :

input_topology :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

input_split_brain :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

input_skeleton :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

input_roots :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

input_grey_white :

gz compressed NIFTI-1 image, Aperio svs, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, Ventana bif, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

input_white_mesh :

GIFTI file, GIFTI file, Maillage MESH, MNI OBJ mesh, PLY mesh, Maillage TRI

input_pial_mesh :

GIFTI file, GIFTI file, Maillage MESH, MNI OBJ mesh, PLY mesh, Maillage TRI

input_commissure :

Commissure coordinates, Commissure coordinates

input_transform :

Transformation matrix, Transformation matrix

output_sulci_graph :

Graph and data, Graph and data

output_sulci_voronoi :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image

output_mid_interface :

gz compressed NIFTI-1 image, DICOM image, Répertoire, ECAT i image, ECAT v image, FDF image, GIS image, JPEG image, MINC image, NIFTI-1 image, SPM image, TIFF image, TIFF(.tif) image, gz compressed MINC image, gz compressed NIFTI-1 image