Compute Cortical Fold Graph Upgrade From Old

Converts an older cortical folds graph (version 3.0 or 3.1) to a newer version (3.1 or 3.3)

Description

The "conversion" actually only recalculates the graph descriptors, and possibly rebuilds some relations. It keeps any existing labels or additional attributes.
For a more complete documentation, see the graph construction process which has the same output.

Note: graphs version 3.2 were transitional, have never been "official" and are unsupported anymore. You should use 3.3 (or newer) instead, and you can still convert them to 3.3.

Parameters

old_graph: Cortical folds graph ( input )

skeleton: Cortex Skeleton ( input )

graph_version: OpenChoice ( input )

graph: Cortical folds graph ( output )

commissure_coordinates: Commissure coordinates ( optional, input )

Talairach_transform: Transform Raw T1 MRI to Talairach-AC/PC-Anatomist ( input )

compute_fold_meshes: Boolean ( input )

allow_multithreading: Boolean ( input )

Technical information

Toolbox : Morphologist

User level : 2

Identifier : CorticalFoldsGraphUpgradeFromOld

File name : brainvisa/toolboxes/morphologist/processes/Sulci/graphmanipulations/CorticalFoldsGraphUpgradeFromOld.py

Supported file formats :

old_graph :

Graph and data, Graph and data

skeleton :

gz compressed NIFTI-1 image, Aperio svs, BMP image, DICOM image, Directory, ECAT i image, ECAT v image, FDF image, FreesurferMGH, FreesurferMGZ, GIF image, GIS image, Hamamatsu ndpi, Hamamatsu vms, Hamamatsu vmu, JPEG image, Leica scn, MINC image, NIFTI-1 image, PBM image, PGM image, PNG image, PPM image, SPM image, Sakura svslide, TIFF image, TIFF image, TIFF(.tif) image, TIFF(.tif) image, VIDA image, Ventana bif, XBM image, XPM image, Zeiss czi, gz compressed MINC image, gz compressed NIFTI-1 image

graph :

Graph and data, Graph and data

commissure_coordinates :

Commissure coordinates, Commissure coordinates

Talairach_transform :

Transformation matrix, Transformation matrix