plaque.h

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/* Copyright (C) 2000-2013 CEA
 *
 * This software and supporting documentation were developed by
 *     bioPICSEL
 *     CEA/DSV/I²BM/MIRCen/LMN, Batiment 61,
 *     18, route du Panorama
 *     92265 Fontenay-aux-Roses
 *     France
 */
 
#ifndef BRAINRAT_DATA_PLAQUEDESCRIPTOR_H
#define BRAINRAT_DATA_PLAQUEDESCRIPTOR_H
 
#include <cartobase/object/object.h>
#include <cartobase/object/pythonreader_d.h>
#include <cartobase/object/pythonwriter_d.h>
 
namespace bio {
  class PlaqueDescriptor
  {
    public:
      PlaqueDescriptor( double x=0.0, double y=0.0, double z=0.0,
                        double radius=0.0, double area=0.0,
                        double redMean=0.0, double blueMean=0.0, double greenMean=0.0,
                        double anisotropy=0.0 );
 
      double x, y, z;
      double radius, area;
      double redMean, blueMean, greenMean;
      double anisotropy;
  };
 
  // Helpers for amyloid plaques parsing
  carto::GenericObject * plaquesHelper( carto::GenericObject * o, const std::string & n, carto::PythonReader & r );
  void plaquesHelper( const carto::GenericObject & obj, soma::PythonWriter & w, int ind, bool writeInternals );
}
 
std::ostream& operator << ( std::ostream& os, const bio::PlaqueDescriptor& thing );
 
namespace carto {
  DECLARE_GENERIC_OBJECT_TYPE( bio::PlaqueDescriptor )
  DECLARE_GENERIC_OBJECT_TYPE( std::vector<bio::PlaqueDescriptor> )
}
 
#endif