Started
Running as <a href='/builds/user/brainvisa' class='jenkins-table__link model-link model-link--float'>brainvisa</a>
----------------------------------------
$ /usr/bin/python3 /volatile/a-sac-ns-brainvisa/bbi-nightly/brainvisa-master-5.3/src/development/casa-distro/master/bin/casa_distro bv_maker name=brainvisa-master-5.3 -- doc
----------------------------------------
Building docs in directory: /casa/host/build
$ make -j32 doc
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warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/aims-free/graph/doxygen/Doxyfile' has become obsolete.
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warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
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warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
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Searching for files in directory /casa/host/bui/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:40: warning: Compound cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:65: warning: Compound cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:43: warning: Compound cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:67: warning: Compound cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:61: warning: Compound cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:51: warning: Compound cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:56: warning: Compound cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:102: warning: Compound cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:111: warning: Compound cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:42: warning: Compound cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:38: warning: Compound cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:44: warning: Compound cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:47: warning: Compound cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:40: warning: Compound cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:35: warning: Compound cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:37: warning: Compound cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Compact3DLookup.h:37: warning: Compound cifti::Compact3DLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:39: warning: Compound cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:76: warning: Compound cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:48: warning: Compound cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:37: warning: Compound cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:48: warning: Compound cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:39: warning: Compound cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:44: warning: Compound cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MatrixFunctions.h:42: warning: Compound cifti::MatrixFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:44: warning: Compound cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:40: warning: Compound cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:38: warning: Compound cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:42: warning: Compound cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:48: warning: Compound cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:49: warning: Compound cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:97: warning: Compound cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:36: warning: Compound cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:41: warning: Compound cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:35: warning: Compound cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:147: warning: Compound cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:149: warning: Compound cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.cxx:51: warning: no matching class member found for 
  void CiftiBrainModelsMap::addSurfaceModel(const int64_t &amp;numberOfNodes, const cifti::StructureEnum::Enum &amp;structure, const vector&lt; int64_t &gt; &amp;nodeList)
Possible candidates:
  'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const float *roi=NULL)'
  'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const std::vector&lt; int64_t &gt; &amp;nodeList)'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.cxx:236: warning: no matching class member found for 
  void CiftiXML::readXML(const vector&lt; char &gt; &amp;text)
Possible candidates:
  'void cifti::CiftiXML::readXML(XmlReader &amp;xml)'
  'void cifti::CiftiXML::readXML(const std::vector&lt; char &gt; &amp;text)'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:60: warning: no matching class member found for 
  VolumeSpace::VolumeSpace(int64_t[3] dims[3], const vector&lt; vector&lt; float &gt; &gt; &amp;sform)
Possible candidates:
  'cifti::VolumeSpace::VolumeSpace()'
  'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform)'
  'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const float sform[12])'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:70: warning: no matching class member found for 
  void VolumeSpace::setSpace(int64_t[3] dims[3], const vector&lt; vector&lt; float &gt; &gt; &amp;sform)
Possible candidates:
  'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform)'
  'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const float sform[12])'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:217: warning: no matching class member found for 
  void CiftiFile::getRow(float *dataOut, const vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const
Possible candidates:
  'void cifti::CiftiFile::getRow(float *dataOut, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead=false) const'
  'void cifti::CiftiFile::getRow(float *dataOut, const int64_t &amp;index, const bool &amp;tolerateShortRead=false) const'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:252: warning: no matching class member found for 
  void CiftiFile::setRow(const float *dataIn, const vector&lt; int64_t &gt; &amp;indexSelect)
Possible candidates:
  'void cifti::CiftiFile::setRow(const float *dataIn, const std::vector&lt; int64_t &gt; &amp;indexSelect)'
  'void cifti::CiftiFile::setRow(const float *dataIn, const int64_t &amp;index)'

WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:330: warning: documented symbol 'CiftiMemoryImpl::CiftiMemoryImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:336: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::getRow(float *dataOut, const vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;) const

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:346: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::getColumn(float *dataOut, const int64_t &amp;index) const

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:359: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::setRow(const float *dataIn, const vector&lt; int64_t &gt; &amp;indexSelect)

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:369: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::setColumn(const float *dataIn, const int64_t &amp;index)

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:382: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:427: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:458: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::getRow(float *dataOut, const vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:463: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::getColumn(float *dataOut, const int64_t &amp;index) const

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:477: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::setRow(const float *dataIn, const vector&lt; int64_t &gt; &amp;indexSelect)

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:482: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::setColumn(const float *dataIn, const int64_t &amp;index)

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:51: warning: no matching class member found for 
  FloatMatrix::FloatMatrix(const vector&lt; vector&lt; float &gt; &gt; &amp;matrixIn)
Possible candidates:
  'cifti::FloatMatrix::FloatMatrix()'
  'cifti::FloatMatrix::FloatMatrix(const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;matrixIn)'
  'cifti::FloatMatrix::FloatMatrix(const int64_t &amp;rows, const int64_t &amp;cols)'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:281: warning: no matching class member found for 
  FloatMatrixRowRef::FloatMatrixRowRef(vector&lt; float &gt; &amp;therow)
Possible candidates:
  'cifti::FloatMatrixRowRef::FloatMatrixRowRef()'
  'cifti::FloatMatrixRowRef::FloatMatrixRowRef(FloatMatrixRowRef &amp;right)'
  'cifti::FloatMatrixRowRef::FloatMatrixRowRef(std::vector&lt; float &gt; &amp;therow)'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:336: warning: no matching class member found for 
  ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const vector&lt; float &gt; &amp;therow)
Possible candidates:
  'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef()'
  'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &amp;right)'
  'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const std::vector&lt; float &gt; &amp;therow)'

/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.cxx:35: warning: no matching file member found for 
XmlAttributesResult cifti::XmlReader_parseAttributes(XmlReader &amp;xml, const vector&lt; AString &gt; &amp;mandatoryNames, const vector&lt; AString &gt; &amp;optionalNames)
Possible candidates:
 'XmlAttributesResult XmlReader_parseAttributes(XmlReader &amp;xml, const std::vector&lt; AString &gt; &amp;mandatoryNames, const std::vector&lt; AString &gt; &amp;optionalNames=std::vector&lt; AString &gt;())' at line 162 of file /casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h

[ 59%] Built target aimsdata
ld/include/soma-io/getopt
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Searching for example files...
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Searching INPUT for files to process...
Reading and parsing tag files
Reading tag file '/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag', location '../../cartobase-5.2/doxygen'...
Parsing files
Preprocessing /casa/host/build/include/graph/config/graph_config.h...
Parsing file /casa/host/build/include/graph/config/graph_config.h...
Preprocessing /casa/host/build/include/graph/doc/graph_doc.h...
Parsing file /casa/host/build/include/graph/doc/graph_doc.h...
Preprocessing /casa/host/build/include/graph/graph/binary.h...
Parsing file /casa/host/build/include/graph/graph/binary.h...
Preprocessing /casa/host/build/include/graph/graph/dedge.h...
Parsing file /casa/ho[ 59%] Built target AimsAverage
[ 59%] Built target AimsComposeTransformation
[ 59%] Built target AimsConnectComp
[ 59%] Built target AimsFileInfo
[ 59%] Built target AimsChannelExtract
[ 59%] Built target AimsFileConvert
[ 59%] Built target AimsFiberOversampler
/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
st/build/include/graph/graph/dedge.h...
Preprocessing /casa/host/build/include/graph/graph/edge.h...
Parsing file /casa/host/build/include/graph/graph/edge.h...
Preprocessing /casa/host/build/include/graph/graph/gfactory.h...
Parsing file /casa/host/build/include/graph/graph/gfactory.h...
Preprocessing /casa/host/build/include/graph/graph/gprinter.h...
Parsing file /casa/host/build/include/graph/graph/gprinter.h...
Preprocessing /casa/host/build/include/graph/graph/graph.h...
Parsing file /casa/host/build/include/graph/graph/graph.h...
Preprocessing /casa/host/build/include/graph/graph/graphobject.h...
Parsing file /casa/host/build/include/graph/graph/graphobject.h...
Preprocessing /casa/host/build/include/graph/graph/greader.h...
Parsing file /casa/host/build/include/graph/graph/greader.h...
Preprocessing /casa/host/build/include/graph/graph/gwriter.h...
Parsing file /casa/host/build/include/graph/graph/gwriter.h...
Preprocessing /casa/host/build/include/graph/graph/gwriter_python.h...
Parsing file /casa/host/build/include/graph/graph/gwriter_python.h...
Preprocessing /casa/host/build/include/graph/graph/uedge.h...
Parsing file /casa/host/build/include/graph/graph/uedge.h...
Preprocessing /casa/host/build/include/graph/graph/vertex.h...
Parsing file /casa/host/build/include/graph/graph/vertex.h...
Preprocessing /casa/host/build/include/graph/graph/gparser.h...
Parsing file /casa/host/build/include/graph/graph/gparser.h...
Preprocessing /casa/host/build/include/graph/graph/gparser_xml.h...
Parsing file /casa/host/build/include/graph/graph/gparser_xml.h...
Preprocessing /casa/host/build/include/graph/graph/gparser_python.h...
Parsing file /casa/host/build/include/graph/graph/gparser_python.h...
Preprocessing /casa/host/build/include/graph/graph/gparser_shfj.h...
Parsing file /casa/host/build/include/graph/graph/gparser_shfj.h...
Preprocessing /casa/host/build/include/graph/io/gprinter.h...
Parsing file /casa/host/build/include/graph/io/gprinter.h...
Preprocessing /casa/host/build/include/graph/io/greader.h...
Parsing file /casa/host/build/include/graph/io/greader.h...
Preprocessing /casa/host/build/include/graph/io/gwriter.h...
Parsing file /casa/host/build/include/graph/io/gwriter.h...
Preprocessing /casa/host/build/include/graph/io/treader.h...
Parsing file /casa/host/build/include/graph/io/treader.h...
Preprocessing /casa/host/build/include/graph/io/twriter.h...
Parsing file /casa/host/build/include/graph/io/twriter.h...
Preprocessing /casa/host/build/include/graph/tree/base.h...
Parsing file /casa/host/build/include/graph/tree/base.h...
Preprocessing /casa/host/build/include/graph/tree/tfactory.h...
Parsing file /casa/host/build/include/graph/tree/tfactory.h...
Preprocessing /casa/host/build/include/graph/tree/treader.h...
Parsing file /casa/host/build/include/graph/tree/treader.h...
Preprocessing /casa/host/build/include/graph/tree/tparser.h...
Parsing file /casa/host/build/include/graph/tree/tparser.h...
Preprocessing /casa/host/build/include/graph/tree/tparser_shfj.h...
Parsing file /casa/host/build/include/graph/tree/tparser_shfj.h...
Preprocessing /casa/host/build/include/graph/tree/tparser_python.h...
Parsing file /casa/host/build/include/graph/tree/tparser_python.h...
Preprocessing /casa/host/build/include/graph/tree/tree.h...
Parsing file /casa/host/build/include/graph/tree/tree.h...
Preprocessing /casa/host/build/include/graph/tree/tvisitor.h...
Parsing file /casa/host/build/include/graph/tree/tvisitor.h...
Preprocessing /casa/host/build/include/graph/tree/twriter.h...
Parsing file /casa/host/build/include/graph/tree/twriter.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interfac/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1288: warning: Member XYZT_TO_SPACE(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1289: warning: Member XYZT_TO_TIME(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1292: warning: Member SPACE_TIME_TO_XYZT(ss, tt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1385: warning: Member DIM_INFO_TO_FREQ_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1386: warning: Member DIM_INFO_TO_PHASE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1387: warning: Member DIM_INFO_TO_SLICE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1390: warning: Member FPS_INTO_DIM_INFO(fd, pd, sd) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of  cifti is not documented.
[ 59%] Built target AimsGraphConvert
[ 59%] Built target AimsGraphExtractTransformation
[ 59%] Built target AimsGraphComplete
[ 59%] Built target AimsFlip
[ 59%] Built target AimsGraphMerge
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti_1_header (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extender (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extension (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member nifti_2_header (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:116: warning: Member AString_split(const AString &amp;input, const char &amp;delim) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:117: warning: Member AString_split_whitespace(const AString &amp;input) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:118: warning: Member AString_toInt(const AString &amp;input, bool &amp;ok) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:119: warning: Member AString_toFloat(const AString &amp;input, bool &amp;ok) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:69: warning: Member operator*(const float &amp;left, const Vector3D &amp;right) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:159: warning: Member XmlReader_readElementText(XmlReader &amp;xml) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:160: warning: Member XmlReader_readNextStartElement(XmlReader &amp;xml) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:161: warning: Member XmlReader_elementName(XmlReader &amp;xml) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:162: warning: Member XmlReader_parseAttributes(XmlReader &amp;xml, const std::vector&lt; AString &gt; &amp;mandatoryNames, const std::vector&lt; AString &gt; &amp;optionalNames=std::vector&lt; AString &gt;()) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:163: warning: Member XmlReader_checkEndElement(XmlReader &amp;xml, const AString &amp;elementName) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:38: warning: Member NIFTI_INTENT_CONNECTIVITY_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:39: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:40: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TIME (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:41: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SERIES (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:42: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:43: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_TIME (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:44: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SERIES (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:45: warning: Member NIFTI_INTENT_CONNECTIVITY_CONNECTIVITY_TRAJECTORY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:46: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TRAJECTORY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:47: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SCALARS (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:48: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_LABELS (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:49: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SCALAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:50: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_DENSE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:51: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_PARCELLATED (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:52: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SERIES (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:53: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SCALAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member NIFTI_ECODE_CIFTI (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:46: warning: Member ModelType (enumeration) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:74: warning: Member hasVolumeData() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:75: warning: Member hasVolumeData(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:76: warning: Member hasSurfaceData(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:77: warning: Member getIndexForNode(const int64_t &amp;node, const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:78: warning: Member getIndexForVoxel(const int64_t *ijk, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:79: warning: Member getIndexForVoxel(const int64_t &amp;i, const int64_t &amp;j, const int64_t &amp;k, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:80: warning: Member getInfoForIndex(const int64_t index) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:81: warning: Member getSurfaceMap(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:82: warning: Member getFullVolumeMap() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:83: warning: Member getVolumeStructureMap(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:84: warning: Member getVolumeSpace() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:85: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:86: warning: Member getSurfaceStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:87: warning: Member getVolumeStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:88: warning: Member getNodeList(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:89: warning: Member getVoxelList(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
[ 59%] Built target AimsInvertTransformation
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:90: warning: Member getModelInfo() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:93: warning: Member addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const float *roi=NULL) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:94: warning: Member addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const std::vector&lt; int64_t &gt; &amp;nodeList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:95: warning: Member addVolumeModel(const StructureEnum::Enum &amp;structure, const std::vector&lt; int64_t &gt; &amp;ijkList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:96: warning: Member setVolumeSpace(const VolumeSpace &amp;space) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:97: warning: Member clear() (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:99: warning: Member clone() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:100: warning: Member getType() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:101: warning: Member getLength() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:102: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:103: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:104: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:105: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:106: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:107: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
[ 59%] Built target AimsMassCenter
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:69: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:70: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:71: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:72: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:63: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:64: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexStart (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexCount (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:53: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:54: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:58: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:59: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:45: warning: Member getMapMetadata(const int64_t &amp;index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:46: warning: Member getMapLabelTable(const int64_t &amp;index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:47: warning: Member getMapName(const int64_t &amp;index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:49: warning: Member setMapMetadata(const int64_t &amp;index, const MetaData &amp;md) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:50: warning: Member setMapLabelTable(const int64_t &amp;index, const LabelTable &amp;lt) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:51: warning: Member setMapName(const int64_t &amp;index, const AString &amp;mapName) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:52: warning: Member setLength(const int64_t &amp;length) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:53: warning: Member clear() (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:55: warning: Member clone() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:56: warning: Member getType() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:57: warning: Member getLength() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:58: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:59: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:60: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:61: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:62: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:63: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:49: warning: Member clone() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:50: warning: Member getType() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:51: warning: Member getLength() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:52: warning: Member operator==(const CiftiMappingType &amp;rhs) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:54: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:55: warning: Member readXML1(XmlReader &amp;xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:56: warning: Member readXML2(XmlReader &amp;xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:57: warning: Member writeXML1(XmlWriter &amp;xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:58: warning: Member writeXML2(XmlWriter &amp;xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:56: warning: Member hasVolumeData() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:57: warning: Member hasSurface(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:58: warning: Member hasSurfaceData(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:59: warning: Member getVolumeSpace() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:60: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:61: warning: Member getIndexForNode(const int64_t &amp;node, const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:62: warning: Member getIndexForVoxel(const int64_t *ijk) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:63: warning: Member getIndexForVoxel(const int64_t &amp;i, const int64_t &amp;j, const int64_t &amp;k) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:64: warning: Member getParcelSurfaceStructures() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:65: warning: Member getParcels() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:68: warning: Member addSurface(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:69: warning: Member setVolumeSpace(const VolumeSpace &amp;space) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:70: warning: Member addParcel(const Parcel &amp;parcel) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:71: warning: Member clear() (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:73: warning: Member clone() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:74: warning: Member getType() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:75: warning: Member getLength() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:76: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:77: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:78: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:79: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:80: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:81: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:52: warning: Member operator==(const Parcel &amp;rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:53: warning: Member operator!=(const Parcel &amp;rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:54: warning: Member approximateMatch(const Parcel &amp;rhs, AString *explanation=NULL) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:49: warning: Member m_surfaceNodes (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:50: warning: Member m_voxelIndices (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:51: warning: Member m_name (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:44: warning: Member CiftiScalarsMap(const CiftiScalarsMap &amp;rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:45: warning: Member operator=(const CiftiScalarsMap &amp;rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:46: warning: Member CiftiScalarsMap(const int64_t &amp;length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:48: warning: Member getMapMetadata(const int64_t &amp;index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:49: warning: Member getMapName(const int64_t &amp;index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:51: warning: Member setMapMetadata(const int64_t &amp;index, const MetaData &amp;mdIn) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:52: warning: Member setMapName(const int64_t &amp;index, const AString &amp;mapName) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:53: warning: Member setLength(const int64_t &amp;length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:54: warning: Member clear() (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:56: warning: Member clone() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:57: warning: Member getType() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:58: warning: Member getLength() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:59: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:60: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:61: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:62: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:63: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:64: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:38: warning: Member Unit (enumeration) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:45: warning: Member getStart() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:46: warning: Member getStep() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:47: warning: Member getUnit() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:56: warning: Member CiftiSeriesMap(const int64_t &amp;length, const float &amp;start=0.0f, const float &amp;step=1.0f, const Unit &amp;unit=SECOND) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:63: warning: Member setStart(const float &amp;start) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:64: warning: Member setStep(const float &amp;step) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:65: warning: Member setUnit(const Unit &amp;unit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:66: warning: Member setLength(const int64_t &amp;length) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:72: warning: Member clone() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:73: warning: Member getType() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:74: warning: Member getLength() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:75: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:84: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:101: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:102: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:103: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:104: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:68: warning: Member stringToUnit(const AString &amp;string, bool &amp;ok) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:69: warning: Member unitToString(const Unit &amp;theUnit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:70: warning: Member getAllUnits() (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:41: warning: Member getMajor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:42: warning: Member getMinor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:45: warning: Member CiftiVersion(const int16_t &amp;major, const int16_t &amp;minor) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:46: warning: Member CiftiVersion(const AString &amp;versionString) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:47: warning: Member toString() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:48: warning: Member operator&lt;(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:49: warning: Member operator&gt;(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:50: warning: Member operator==(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:51: warning: Member operator!=(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:52: warning: Member operator&lt;=(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:53: warning: Member operator&gt;=(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:57: warning: Member getNumberOfDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:58: warning: Member getParsedVersion() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:65: warning: Member getFileMetaData() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:67: warning: Member getMappingType(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:68: warning: Member getBrainModelsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:69: warning: Member getBrainModelsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:70: warning: Member getLabelsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:71: warning: Member getLabelsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:72: warning: Member getParcelsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:73: warning: Member getParcelsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:74: warning: Member getScalarsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:75: warning: Member getScalarsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:76: warning: Member getSeriesMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:77: warning: Member getSeriesMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:78: warning: Member getDimensionLength(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:79: warning: Member getDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:81: warning: Member setNumberOfDimensions(const int &amp;num) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:82: warning: Member setMap(const int &amp;direction, const CiftiMappingType &amp;mapIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:83: warning: Member setFileMetaData(const MetaData &amp;mdIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:84: warning: Member clear() (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:86: warning: Member readXML(XmlReader &amp;xml) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:87: warning: Member readXML(const std::vector&lt; char &gt; &amp;text) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:89: warning: Member writeXMLToVector(const CiftiVersion &amp;writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:90: warning: Member writeXML(XmlWriter &amp;xml, const CiftiVersion &amp;writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:96: warning: Member CiftiXML(const CiftiXML &amp;rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:97: warning: Member operator=(const CiftiXML &amp;rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:98: warning: Member operator==(const CiftiXML &amp;rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:99: warning: Member operator!=(const CiftiXML &amp;rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:100: warning: Member approximateMatch(const CiftiXML &amp;rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:82: warning: Member Label(const Label &amp;gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:85: warning: Member operator=(const Label &amp;gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:95: warning: Member hashCode() (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:133: warning: Member matches(const Label &amp;rhs, const bool checkColor=false) const (function) of class cifti::Label is not documented.
loading pickled environment... /casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:49: warning: Member LabelTable(const LabelTable &amp;glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:51: warning: Member operator=(const LabelTable &amp;glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:53: warning: Member matches(const LabelTable &amp;rhs, const bool checkColors=false) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:55: warning: Member operator==(const LabelTable &amp;rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:57: warning: Member operator!=(const LabelTable &amp;rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:148: warning: Member createLabelsForKeys(const std::set&lt; int32_t &gt; &amp;newKeys) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:150: warning: Member writeXML(XmlWriter &amp;xmlWriter) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:152: warning: Member readXml(XmlReader &amp;xml) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:156: warning: Member getKeys(std::vector&lt; int32_t &gt; &amp;keysOut) const (function) of class cifti::LabelTable is not documented.
loading pickled environment... /casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:50: warning: Member MetaData(const MetaData &amp;o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:52: warning: Member operator=(const MetaData &amp;o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:54: warning: Member operator==(const MetaData &amp;rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:56: warning: Member operator!=(const MetaData &amp;rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:94: warning: Member writeCiftiXML1(XmlWriter &amp;xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:95: warning: Member writeCiftiXML2(XmlWriter &amp;xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:96: warning: Member readCiftiXML1(XmlReader &amp;xml) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:97: warning: Member readCiftiXML2(XmlReader &amp;xml) (function) of class cifti::MetaData is not documented.
loading pickled environment... [ 59%] Built target AimsMeshArea
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:47: warning: Member OrientTypes (enumeration) of class cifti::VolumeSpace is not documented.
[ 59%] Built target AimsMerge2Rgb
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:57: warning: Member VolumeSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:58: warning: Member VolumeSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:59: warning: Member setSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:60: warning: Member setSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:61: warning: Member getDims() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:62: warning: Member getSform() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:63: warning: Member getSpacingVectors(Vector3D &amp;iStep, Vector3D &amp;jStep, Vector3D &amp;kStep, Vector3D &amp;origin) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:64: warning: Member matchesVolumeSpace(const VolumeSpace &amp;right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:65: warning: Member operator==(const VolumeSpace &amp;right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:66: warning: Member operator!=(const VolumeSpace &amp;right) const (function) of class cifti::VolumeSpace is not documented.
[ 59%] Built target AimsMeshCut
[ 59%] Built target AimsMergeLabel
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:115: warning: Member indexValid(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:129: warning: Member getIndex(const int64_t &amp;indexIn1, const int64_t &amp;indexIn2, const int64_t &amp;indexIn3) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:135: warning: Member getIndex(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:140: warning: Member readCiftiXML1(XmlReader &amp;xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:141: warning: Member readCiftiXML2(XmlReader &amp;xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:142: warning: Member writeCiftiXML1(XmlWriter &amp;xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:143: warning: Member writeCiftiXML2(XmlWriter &amp;xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:48: warning: Member ENDIAN (enumeration) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:73: warning: Member getCiftiXML() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:74: warning: Member isInMemory() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:78: warning: Member getDimensions() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:89: warning: Member setCiftiXML(const CiftiXML &amp;xml, const bool useOldMetadata=true) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:90: warning: Member setRow(const float *dataIn, const std::vector&lt; int64_t &gt; &amp;indexSelect) (function) of class cifti::CiftiFile is not documented.
[ 59%] Built target AimsMeshes2Graph
[ 59%] Built target AimsMeshGenerate
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &amp;index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
done
[ 59%] Built target AimsMeshTransform
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:114: warning: Member setRow(const float *dataIn, const std::vector&lt; int64_t &gt; &amp;indexSelect)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:115: warning: Member setColumn(const float *dataIn, const int64_t &amp;index)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &amp;index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:103: warning: Member open(const AString &amp;filename, const BinaryFile::OpenMode &amp;opmode) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:104: warning: Member close() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:105: warning: Member seek(const int64_t &amp;position) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:106: warning: Member pos() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:107: warning: Member read(void *dataOut, const int64_t &amp;count, int64_t *numRead) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:108: warning: Member write(const void *dataIn, const int64_t &amp;count) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:43: warning: Member OpenMode (enumeration) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:56: warning: Member open(const AString &amp;filename, const OpenMode &amp;opmode=READ) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:57: warning: Member close() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:58: warning: Member getFilename() const (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:59: warning: Member getOpenForRead() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:60: warning: Member getOpenForWrite() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:61: warning: Member seek(const int64_t &amp;position) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:62: warning: Member pos() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:63: warning: Member read(void *dataOut, const int64_t &amp;count, int64_t *numRead=NULL) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:64: warning: Member write(const void *dataIn, const int64_t &amp;count) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:70: warning: Member open(const AString &amp;filename, const OpenMode &amp;opmode)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:71: warning: Member close()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:73: warning: Member seek(const int64_t &amp;position)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:74: warning: Member pos()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:75: warning: Member read(void *dataOut, const int64_t &amp;count, int64_t *numRead)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:76: warning: Member write(const void *dataIn, const int64_t &amp;count)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:43: warning: Member swap(T &amp;toSwap) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:46: warning: Member swapArray(T *toSwap, const uint64_t &amp;count) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:48: warning: Member isBigEndian() (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:110: warning: Member end() (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:111: warning: Member end() const (function) of class cifti::CompactLookup is not documented.
building [mo]: targets for 0 po files that are out of date
writing output... 
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:83: warning: Member operator==(const const_iterator &amp;rhs) const (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:90: warning: Member operator*() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:96: warning: Member operator-&gt;() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:55: warning: Member operator==(const iterator &amp;rhs) const (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:62: warning: Member operator*() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:68: warning: Member operator-&gt;() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:42: warning: Member ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &amp;right) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:43: warning: Member ConstFloatMatrixRowRef(const std::vector&lt; float &gt; &amp;therow) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:44: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:53: warning: Member FloatMatrixRowRef(FloatMatrixRowRef &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:54: warning: Member FloatMatrixRowRef(std::vector&lt; float &gt; &amp;therow) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:55: warning: Member operator=(const FloatMatrixRowRef &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:56: warning: Member operator=(const ConstFloatMatrixRowRef &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:57: warning: Member operator=(const float &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
building [html]: targets for 0 source files that are out of date
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:58: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::FloatMatrixRowRef is not documented.
updating environment: /casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:73: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::FloatMatrix is not documented.
0 added, 1 changed, 0 removed
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:74: warning: Member operator[](const int64_t &amp;index) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:75: warning: Member operator+=(const FloatMatrix &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:76: warning: Member operator-=(const FloatMatrix &amp;right) (function) of class cifti::FloatMatrix is not documented.
reading sources... [100%] populse_db
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:77: warning: Member operator*=(const FloatMatrix &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:78: warning: Member operator+=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:79: warning: Member operator-=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:80: warning: Member operator*=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:81: warning: Member operator/=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:82: warning: Member operator+(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:83: warning: Member operator-(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:84: warning: Member operator-() const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:85: warning: Member operator*(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:86: warning: Member operator==(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:87: warning: Member operator!=(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:131: warning: Member addVectors(const float v1[3], const float v2[3], float resultOut[3]) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:261: warning: Member isNaN(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:263: warning: Member isPosInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:265: warning: Member isNegInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:227: warning: The following parameter of cifti::MathFunctions::arraysEqual(const float a[], const float b[], const int32_t numElements) is not documented:
  parameter 'numElements'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:273: warning: The following parameter of cifti::MathFunctions::compareArrays(const float a1[], const float a2[], const int32_t numElements, const float tolerance) is not documented:
  parameter 'numElements'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:121: warning: The following parameters of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2) are not documented:
  parameter 'x1'
  parameter 'y1'
  parameter 'x2'
  parameter 'y2'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:79: warning: The following parameter of cifti::MathFunctions::normalizedCrossProduct(const float x1[], const float x2[], float resultOut[]) is not documented:
  parameter 'resultOut'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:352: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(double vector[3])
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:90: warning: The following parameter of cifti::MathFunctions::normalizeVector(double vector[3]) is not documented:
  parameter 'vector'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:333: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(float vector[3])
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:88: warning: The following parameter of cifti::MathFunctions::normalizeVector(float vector[3]) is not documented:
  parameter 'vector'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:63: warning: The following parameter of cifti::MathFunctions::normalVectorDirection(const float v1[3], const float v2[3], const float v3[3], float directionOut[3]) is not documented:
  parameter 'directionOut'
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:47: warning: Member getDimensions() const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:49: warning: Member resize(const std::vector&lt; I &gt; &amp;dims) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:51: warning: Member at(const std::vector&lt; I &gt; &amp;pos) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:53: warning: Member at(const std::vector&lt; I &gt; &amp;pos) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:55: warning: Member get(const int &amp;fullDims, const std::vector&lt; I &gt; &amp;indexSelect) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:57: warning: Member get(const int &amp;fullDims, const std::vector&lt; I &gt; &amp;indexSelect) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:45: warning: Member MultiDimIterator(const std::vector&lt; T &gt; &amp;dimensions) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:46: warning: Member operator++() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:47: warning: Member operator++(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:48: warning: Member operator--() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:49: warning: Member operator--(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:50: warning: Member operator*() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:51: warning: Member atEnd() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:41: warning: Member dot(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:42: warning: Member cross(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:43: warning: Member normal(float *origLength=NULL) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:44: warning: Member length() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:45: warning: Member lengthsquared() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:48: warning: Member Vector3D(const float &amp;x, const float &amp;y, const float &amp;z) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:49: warning: Member Vector3D(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:51: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:52: warning: Member operator[](const int64_t &amp;index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:53: warning: Member operator[](const int32_t &amp;index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:54: warning: Member operator[](const int32_t &amp;index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:55: warning: Member operator=(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:57: warning: Member operator+=(const Vector3D &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:58: warning: Member operator-=(const Vector3D &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:59: warning: Member operator*=(const float &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:60: warning: Member operator/=(const float &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:61: warning: Member operator+(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:62: warning: Member operator-(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:63: warning: Member operator-() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:64: warning: Member operator*(const float &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:65: warning: Member operator/(const float &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:66: warning: Member operator float *() (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:39: warning: Member VoxelIJK(int64_t i, int64_t j, int64_t k) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:41: warning: Member VoxelIJK(const T ijk[3]) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:46: warning: Member operator&lt;(const VoxelIJK &amp;rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:54: warning: Member operator==(const VoxelIJK &amp;rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:60: warning: Member operator!=(const VoxelIJK &amp;rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:37: warning: Member m_ijk[3] (variable) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:155: warning: Member mandatoryVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:156: warning: Member optionalVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:152: warning: Member present (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:153: warning: Member value (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
[ 59%] Built target AimsRoiFeatures
[ 59%] Built target AimsRemoveNaN
[ 59%] Built target AimsOverVolume
[ 59%] Built target AimsSetMinf
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
[ 59%] Built target AimsSelectLabel
[ 59%] Built target AimsSplitRgb
[ 59%] Built target AimsSubVolume
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:44: warning: Member m_ecode (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:45: warning: Member m_bytes (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:53: warning: Member read(BinaryFile &amp;inFile) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:54: warning: Member write(BinaryFile &amp;outFile, const int &amp;version=1, const bool &amp;swapEndian=false) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:55: warning: Member canWriteVersion(const int &amp;version) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:56: warning: Member isSwapped() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:57: warning: Member version() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:59: warning: Member getDimensions() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:60: warning: Member getSForm() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:61: warning: Member getDataOffset() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:62: warning: Member getDataType() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:63: warning: Member getIntentCode() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:64: warning: Member getIntentName() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:65: warning: Member getDataScaling(double &amp;mult, double &amp;offset) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:66: warning: Member toString() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:68: warning: Member setDimensions(const std::vector&lt; int64_t &gt; &amp;dimsIn) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:69: warning: Member setSForm(const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sForm) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:70: warning: Member setIntent(const int32_t &amp;code, const char name[16]) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:71: warning: Member setDataType(const int16_t &amp;type) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:72: warning: Member clearDataScaling() (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:73: warning: Member setDataScaling(const double &amp;mult, const double &amp;offset) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:77: warning: Member operator==(const NiftiHeader &amp;rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:78: warning: Member operator!=(const NiftiHeader &amp;rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:50: warning: Member m_extensions (variable) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:62: warning: Member openRead(const AString &amp;filename) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:63: warning: Member writeNew(const AString &amp;filename, const NiftiHeader &amp;header, const int &amp;version=1, const bool &amp;withRead=false, const bool &amp;swapEndian=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:64: warning: Member getFilename() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:65: warning: Member overrideDimensions(const std::vector&lt; int64_t &gt; &amp;newDims) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:66: warning: Member close() (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:67: warning: Member getHeader() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:68: warning: Member getDimensions() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:69: warning: Member getNumComponents() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:73: warning: Member readData(T *dataOut, const int &amp;fullDims, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/master/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:75: warning: Member writeData(const T *dataIn, const int &amp;fullDims, const std::vector&lt; int64_t &gt; &amp;indexSelect) (function) of class cifti::NiftiIO is not documented.
[ 63%] Built target aimsalgo
done
[ 63%] Built target AimsTex2Vol
[ 63%] Built target AimsThreshold
[ 63%] Built target AimsTex2Graph
[ 63%] Built target AimsTCat
[ 63%] Built target AimsSumSparseMatrix
[ 63%] Built target AimsVectorFieldToMesh
[ 63%] Built target AimsVolumeExtract
loading intersphinx inventory from <a href='https://docs.python.org/3.10/objects.inv'>https://docs.python.org/3.10/objects.inv</a>...
done
loading intersphinx inventory from <a href='https://docs.python.org/3.10/objects.inv'>https://docs.python.org/3.10/objects.inv</a>...
[ 63%] Built target aimstiff
loading intersphinx inventory from <a href='https://docs.enthought.com/traits/objects.inv'>https://docs.enthought.com/traits/objects.inv</a>...
[ 63%] Built target AimsBundleAnalysis
[ 63%] Built target AimsAddNoise2Data
[ 63%] Built target Aims3DPointCloud
[ 63%] Built target AimsBundle2Vol
[ 63%] Built target AimsApplyVectorField
[ 63%] Built target AimsActivPixel2Volume
e member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file graph/config/graph_config.h...
Generating code for file graph/doc/graph_doc.h...
Generating code for file graph/graph/binary.h...
Generating code for file graph/graph/dedge.h...
Generating code for file graph/graph/edge.h...
Generating code for file graph/graph/gfactory.h...
Generating code for file graph/graph/gparser.h...
Generating code for file graph/graph/gparser_python.h...
Generating code for file graph/graph/gparser_shfj.h...
Generating code for file graph/graph/gparser_xml.h...
Generating code for file graph/graph/gprinter.h...
Generating code for file graph/io/gprinter.h...
Generating code for file graph/graph/graph.h...
Generating code for file graph/graph/graphobject.h...
Generating code for file graph/graph/greader.h...
Generating code for file graph/io/greader.h...
Generating code for file graph/graph/gwriter.h...
Generating code for file graph/io/gwriter.h...
Generating code for file graph/graph/gwriter_python.h...
Generating code for file graph/graph/uedge.h...
Generating code for file graph/graph/vertex.h...
Generating code for file graph/io/treader.h...
Generating code for file graph/tree/treader.h...
Generating code for file graph/io/twriter.h...
Generating code for file graph/tree/twriter.h...
Generating code for file graph/tree/base.h...
Generating code for file graph/tree/tfactory.h...
Generating code for file graph/tree/tparser.h...
Generating code for file graph/tree/tparser_python.h...
Generating code for file graph/tree/tparser_shfj.h...
Generating code for file graph/tree/tree.h...
Generating code for file graph/tree/tvisitor.h...
Generating file documentation...
Generating docs for file graph/config/graph_config.h...
Generating docs for file graph/doc/graph_doc.h...
Generating docs for file graph/graph/binary.h...
Generating docs for file graph/graph/dedge.h...
Generating docs for file graph/graph/edge.h...
Generating docs for file graph/graph/gfactory.h...
Generating docs for file graph/graph/gparser.h...
Generating docs for file graph/graph/gparser_python.h...
Generating docs for file graph/graph/gparser_shfj.h...
Generating docs for file graph/graph/gparser_xml.h...
Generating docs for file graph/graph/gprinter.h...
Generating docs for file graph/io/gprinter.h...
Generating docs for file graph/graph/graph.h...
Generating docs for file graph/graph/graphobject.h...
Generating docs for file graph/graph/greader.h...
Generating docs for file graph/io/greader.h...
Generating docs for file graph/graph/gwriter.h...
Generating docs for file graph/io/gwriter.h...
Generating docs for file graph/graph/gwriter_python.h...
Generating docs for file graph/graph/uedge.h...
Generating docs for file graph/graph/vertex.h...
Generating docs for file graph/io/treader.h...
Generatin[ 63%] Built target AimsApplyTransform
[ 63%] Built target doxygen
[ 63%] Built target AimsBuildDti
[ 63%] Built target AimsBuildIndex
[ 63%] Built target AimsChamferDistanceMap
[ 63%] Built target AimsBvalue
[ 63%] Built target AimsClusterArg
[ 63%] Built target AimsConvexHull
[ 63%] Built target AimsCorrectionEpi
[ 63%] Built target AimsT2BasedCorrectionEpi
[ 63%] Built target AimsCreateTexture
[ 63%] Built target AimsCurvature2d
[ 63%] Built target AimsCurvature3d
[ 63%] Built target AimsCylinder
[ 63%] Built target AimsDanielssonDist
[ 63%] Built target AimsElevationMap
[ 63%] Built target AimsFoldArgAtt
[ 63%] Built target AimsCompareSPMtToPrimalSketch
[ 63%] Built target AimsFrontDistanceMap
[ 63%] Built target AimsGaussianSmoothing
[ 63%] Built target AimsGaussianSmoothing1d
[ 63%] Built target AimsGraphMesh
[ 63%] Built target AimsGTMDump
[ 63%] Built target AimsGraphTransferLabels
[ 63%] Built target AimsIcmSpaghetti
[ 63%] Built target AimsHippocampicReferential
[ 63%] Built target AimsIcmSpaghettiN
[ 63%] Built target AimsIcosaList
[ 63%] Built target AimsImageGLBlobStats
[ 63%] Built target AimsImagePrimalSketch
g docs for file graph/tree/treader.h...
Generating docs for file graph/io/twriter.h...
Generating docs for file graph/tree/twriter.h...
Generating docs for file graph/tree/base.h...
Generating docs for file graph/tree/tfactory.h...
Generating docs for file graph/tree/tparser.h...
Generating docs for file graph/tree/tparser_python.h...
Generating docs for file graph/tree/tparser_shfj.h...
Generating docs for file graph/tree/tree.h...
Generating docs for file graph/tree/tvisitor.h...
Generating page documentation...
Generating docs for page deprecated...
Generating group documentation...
Generating class documentation...
Generating docs for compound BaseTree...
Generating docs for compound ConstTreeVisitor...
Generating docs for compound DEdge...
Generating docs for compound Edge...
Generating docs for compound Graph...
Generating docs for compound GraphFactory...
Generating docs for compound GraphObject...
Generating docs for compound GraphParser...
Generating docs for compound GraphParser_shfj...
Generating docs for compound GraphParser_xml...
Generating docs for compound GraphPrinter...
Generating docs for compound GraphReader...
Generating docs for compound GraphWriter...
Generating docs for compound Tree...
Generating docs for compound TreeFactory...
Generating docs for compound TreeReader...
Generating docs for compound TreeVisitor...
Generating docs for compound TreeWriter...
Generating docs for compound UEdge...
Generating docs for compound Vertex...
Generating namespace index...
Generating docs for namespace carto
Generating docs for compound carto::DataTypeCode&lt; Graph &gt;...
Generating docs for compound carto::GraphWriter_Python...
Generating docs for compound carto::GraphParser_Python...
Generating docs for compound carto::TreeParser...
Generating docs for compound carto::TreeParser_shfj...
Generating docs for compound carto::TreeParser_Python...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory graph
Generating dependency graph for directory graph/graph
Generating dependency graph for directory graph/io
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[ 72%] Built target AimsRegisterQNEstimate
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[ 72%] Built target AimsSelectGradPoints
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[ 72%] Built target AimsSegmentationEM
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[ 72%] Built target bioKMeans
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intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to &lt;class 'FileNotFoundError'&gt;: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
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/include/kdtree++
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loading intersphinx inventory from <a href='https://docs.python.org/3.10/objects.inv'>https://docs.python.org/3.10/objects.inv</a>...
[ 72%] Built target AimsCoordinatesTextureToMesh
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done
[ 77%] Built target AimsTextureToAtlas
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[ 77%] Built target surfStructuralAnalysis
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ld/include/soma-io/getopt
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Reading tag file '/casa/host/build/share/doc/graph-5.2/doxygen/graph.tag', location '../../graph-5.2/doxygen'...
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Parsing files
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[autosummary] generating autosummary for: bv_command.rst, bv_command_help.rst, casa_distro_admin_command.rst, casa_distro_admin_command_help.rst, casa_distro_command.rst, casa_distro_command_help.rst, concepts.rst, developer.rst, index.rst, nightly.rst, technical.rst
[ 77%] Built target VipDeriche
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build succeeded.

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WARNING: autodoc: failed to import module 'info' from module 'populse_db'; the following exception was raised:
No module named 'populse_db.info'
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[ 77%] Built target VipGreyStatFromClassif
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done
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[ 77%] Built target VipHyste
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casa/host/build/include/aims/io/argW.h...
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build succeeded, 1 warning.

The HTML pages are in ../../../share/doc/aimsdata-5.2/dev_doc.
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build succeeded, 1 warning.

The HTML pages are in ../../share/doc/soma-io-5.2.
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Parsing filewriting output... [ 66%] modules
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reading sources... [ 66%] casa_distro_admin_command_help
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/casa/host/build/include/aims/utility/anytype_reader_details.h:36: warning: the name 'Belongs' supplied as the argument in the \file statement is not an input file
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[NbConvertApp] Converting notebook /casa/host/src/capsul/master/doc/source/tutorial/capsul_tutorial.ipynb.in to notebook
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/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
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/casa/host/build/include/aims/data/cartodatavolume.h:62: warning: the name 'classes' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
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QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
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[ 95%] Create "share/doc/5.2"
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../../../src/development/casa-distro/master/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
/casa/host/src/development/casa-distro/master/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
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/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:368: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:394: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:530: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:576: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:219: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:383: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:456: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:537: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:580: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:40: WARNING: duplicate label casa-distro-admin-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:57: WARNING: duplicate label casa-distro-admin-singularity-deb-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:368: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:394: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:530: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:576: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:219: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:383: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:456: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:537: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst:580: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_admin_command_help.rst
../../../src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:292: ERROR: Unexpected indentation.
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:40: WARNING: duplicate label casa-distro-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:57: WARNING: duplicate label casa-distro-distro-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:65: WARNING: duplicate label casa-distro-list-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:115: WARNING: duplicate label casa-distro-run-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:209: WARNING: duplicate label casa-distro-pull-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:311: WARNING: duplicate label casa-distro-shell-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:402: WARNING: duplicate label casa-distro-mrun-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:499: WARNING: duplicate label casa-distro-bv-maker-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:69: WARNING: duplicate label casa_distro_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:123: WARNING: duplicate label casa_distro_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:248: WARNING: duplicate label casa_distro_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:316: WARNING: duplicate label casa_distro_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:413: WARNING: duplicate label casa_distro_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:504: WARNING: duplicate label casa_distro_command:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:292: ERROR: Unexpected indentation.
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:40: WARNING: duplicate label casa-distro-help-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:57: WARNING: duplicate label casa-distro-distro-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:65: WARNING: duplicate label casa-distro-list-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:115: WARNING: duplicate label casa-distro-run-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:209: WARNING: duplicate label casa-distro-pull-image-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:311: WARNING: duplicate label casa-distro-shell-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:402: WARNING: duplicate label casa-distro-mrun-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:499: WARNING: duplicate label casa-distro-bv-maker-help, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:69: WARNING: duplicate label casa_distro_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:123: WARNING: duplicate label casa_distro_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:248: WARNING: duplicate label casa_distro_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:316: WARNING: duplicate label casa_distro_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:413: WARNING: duplicate label casa_distro_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
/casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst:504: WARNING: duplicate label casa_distro_command_help:parameters, other instance in /casa/host/src/development/casa-distro/master/doc/source/casa_distro_command_help.rst
looking for now-outdated files... none found
pickling environment... [ 95%] Built target axon-usrsphinx
[ 95%] Built target morphologist-ui-usrdoc
[ 95%] Built target populse-db-sphinx
[NbConvertApp] Writing 59249 bytes to /casa/host/src/capsul/master/doc/source/tutorial/capsul_tutorial.ipynb
[ 95%] Create "share/doc/5.2"
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
done
checking consistency... done
preparing documents... done
writing output... [ 14%] bv_command
/casa/host/build/include/aims/border/borderiterator.h:290: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::const_iterator &amp;other)
Possible candidates:
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const const_iterator &amp;other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const iterator &amp;other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, const Point4dl &amp;current)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:297: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::iterator &amp;other)
Possible candidates:
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const const_iterator &amp;other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const iterator &amp;other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, const Point4dl &amp;current)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:304: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  BorderIterator&lt; T &gt;::const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::const_iterator &amp;other)
Possible candidates:
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const const_iterator &amp;other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const iterator &amp;other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:313: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  BorderIterator&lt; T &gt;::const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::iterator &amp;other)
Possible candidates:
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const const_iterator &amp;other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const iterator &amp;other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:552: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  aims::BorderIterator&lt; T &gt;::iterator::iterator(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::iterator &amp;other)
Possible candidates:
  'aims::BorderIterator&lt; T &gt;::iterator::iterator()' at line 213 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::iterator::iterator(const iterator &amp;other)' at line 215 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::iterator::iterator(BorderIterator&lt; T &gt; &amp;b, bool end=false)' at line 219 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::iterator::iterator(BorderIterator&lt; T &gt; &amp;b, const Point4dl &amp;current)' at line 221 of file /casa/host/build/include/aims/border/borderiterator.h

[ 95%] Create "share/doc/3.0"
/casa/host/build/include/aims/connectivity/structuring_element.h:94: warning: no uniquely matching class member found for 
  iterator over Point3dl of the aims::StructuringElement::aims::StructuringElement

/casa/host/build/include/aims/connectivity/structuring_element.h:96: warning: documented symbol 'const_iterator over Point3dl of aims::StructuringElement::the' was not declared or defined.
/casa/host/build/include/aims/connectivity/structuring_element.h:381: warning: documented symbol 'bool matrix x3x3 elements that describe a aims::strel::Connectivity::D' was not declared or defined.
/casa/host/build/include/aims/data/cartodatavolume.h:761: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::reference AimsData&lt; T &gt;::operator[](AimsData&lt; T &gt;::size_t n)
Possible candidates:
  'reference AimsData&lt; T &gt;::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/cartodatavolume.h:770: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::const_reference AimsData&lt; T &gt;::operator[](AimsData&lt; T &gt;::size_t n) const
Possible candidates:
  'reference AimsData&lt; T &gt;::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/cartodatavolume.h:779: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::reference AimsData&lt; T &gt;::operator()(AimsData&lt; T &gt;::size_t x, AimsData&lt; T &gt;::size_type y, AimsData&lt; T &gt;::size_type z, AimsData&lt; T &gt;::size_type t)
Possible candidates:
  'reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/cartodatavolume.h:789: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::const_reference AimsData&lt; T &gt;::operator()(AimsData&lt; T &gt;::size_t x, AimsData&lt; T &gt;::size_type y, AimsData&lt; T &gt;::size_type z, AimsData&lt; T &gt;::size_type t) const
Possible candidates:
  'reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h

[ 95%] Built target axon-usrdoc
/casa/host/build/include/aims/data/fastAllocationData.h:111: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  const carto::AllocatorContext AimsFastAllocationData&lt; T &gt;::fastAllocatorContext &amp; aims::carto::MemoryAllocator::singleton()

/casa/host/build/include/aims/data/pheader.h:101: warning: no uniquely matching class member found for 
  template 
  Object carto::Object::value(const aims::PythonHeader &amp;v)
Possible candidates:
  'Object carto::Object::value(const Object &amp;value)' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
  'static Object carto::Object::value()' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag
  'static Object carto::Object::value(const T &amp;)' at line 1 of file /casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag

[ 95%] Built target anatomist-free-usrsphinx
[ 95%] Built target populse-db-devdoc
[ 95%] Create "share/doc/5.2"
/casa/host/build/include/aims/utility/channel.h:122: warning: no uniquely matching class member found for 
  template &lt; T, U, C &gt;
  U ChannelSelector::select(const T &amp;input, const uint8_t)

/casa/host/build/include/aims/utility/channel.h:128: warning: no uniquely matching class member found for 
  template &lt; T, U, C &gt;
  void ChannelSelector::set(T &amp;input, const uint8_t, const U &amp;value)

/casa/host/build/include/aims/utility/channel.h:134: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  U ChannelSelector::select(const AimsRGB &amp;input, const uint8_t channel)

/casa/host/build/include/aims/utility/channel.h:155: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  void ChannelSelector::set(AimsRGB &amp;input, const uint8_t channel, const U &amp;value)

/casa/host/build/include/aims/utility/channel.h:171: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  U ChannelSelector::select(const AimsRGBA &amp;input, const uint8_t channel)

/casa/host/build/include/aims/utility/channel.h:196: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  void ChannelSelector::set(AimsRGBA &amp;input, const uint8_t channel, const U &amp;value)

/casa/host/build/include/aims/utility/channel.h:215: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  U ChannelSelector::select(const AimsHSV &amp;input, const uint8_t channel)

/casa/host/build/include/aims/utility/channel.h:239: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  void ChannelSelector::set(AimsHSV &amp;input, const uint8_t channel, const U &amp;value)

/casa/host/build/include/aims/utility/converter_bucket.h:264: warning: no uniquely matching class member found for 
  template &lt; INP, OUTP &gt;
  void carto::RawConverter&lt; INP, OUTP &gt;::printToVolume(const aims::BucketMap&lt; INP &gt; &amp;in, carto::rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &amp;out, const Point3d &amp;offset) const

/casa/host/build/include/aims/utility/converter_bucket.h:384: warning: no uniquely matching class member found for 
  template &lt; OUTP &gt;
  void carto::RawConverter&lt; OUTP &gt;::printToVolume(const aims::BucketMap&lt; Void &gt; &amp;in, carto::rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &amp;out, const Point3d &amp;offset) const

[ 95%] Built target populse-db-doc
[ 95%] Built target anatomist-free-usrdoc
writing output... [ 28%] bv_command_help
writing output... [ 42%] casa_distro_admin_command
-- nbsphinx should work. --
Using Qt backend: PyQt5
source: /casa/host/src/capsul/master/doc/source
dest: /casa/host/build/share/doc/capsul-2.6
cwd: /casa/host/src/capsul/master/doc/source
exec: /usr/bin/python3.10 -m jupyter nbconvert --to notebook --output /casa/host/src/capsul/master/doc/source/tutorial/capsul_tutorial.ipynb /casa/host/src/capsul/master/doc/source/tutorial/capsul_tutorial.ipynb.in
loading pickled environment... writing output... [ 57%] casa_distro_admin_command_help
(EE) 
Fatal server error:
(EE) Server is already active for display 2
	If this server is no longer running, remove /tmp/.X2-lock
	and start again.
(EE) 
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_info.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_sources.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_status.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_configure.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_build.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_doc.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_testref.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_test.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_pack.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_install_pack.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_testref_pack.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_test_pack.rst
generate: /casa/host/src/development/brainvisa-cmake/master/doc/sphinx/bv_maker_help_publish_pack.rst
loading pickled environment... writing output... [ 71%] casa_distro_command
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/io/process.h:256: warning: included file AimsFileInfo/fileInfo.cc is not found. Check your EXAMPLE_PATH
done
[autosummary] generating autosummary for: bv_env.rst, bv_maker.rst, bv_maker_help.rst, bv_maker_help_build.rst, bv_maker_help_configure.rst, bv_maker_help_doc.rst, bv_maker_help_info.rst, bv_maker_help_install_pack.rst, bv_maker_help_pack.rst, bv_maker_help_publish_pack.rst, ..., bv_maker_help_testref.rst, bv_maker_help_testref_pack.rst, cmake_functions.rst, compile_existing.rst, configuration.rst, dependencies.rst, documenting.rst, index.rst, new_project.rst, testing_monitoring.rst
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:01,519::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 14 source files that are out of date
updating environment: 0 added, 15 changed, 0 removed
reading sources... [  6%] bv_maker
writing output... [ 85%] casa_distro_command_help
[autosummary] generating autosummary for: capsul.rst, developer_manual.rst, index.rst, python.rst, python_bv_configuration.rst, python_bv_data.rst, python_bv_data_gui.rst, python_bv_processing.rst, python_bv_processing_gui.rst, python_bv_tools.rst, usecases.rst, usecases_nb.ipynb
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:01,601::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
Starting Anatomist.....
writing output... [100%] index
ude/aims/io/giftitextureformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftiheader.h...
Parsing file /casa/host/build/include/aims/io/giftiheader.h...
Preprocessing /casa/host/build/include/aims/io/giftifinderformat.h...
Parsing file /casa/host/build/include/aims/io/giftifinderformat.h...
Preprocessing /casa/host/build/include/aims/io/giftiutil.h...
Parsing file /casa/host/build/include/aims/io/giftiutil.h...
Preprocessing /casa/host/build/include/aims/plugin/giftiplugin.h...
Parsing file /casa/host/build/include/aims/plugin/giftiplugin.h...
Preprocessing /casa/host/build/include/aims/config/config.h...
Parsing file /casa/host/build/include/aims/config/config.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating docs for example AimsFileInfo/fileInfo.cc...
Generating file sources...
Generating code for file aims/border/borderfiller.h...
Generating code for file aims/border/borderiterator.h...
Generating code for file aims/bucket/bucket.h...
Generating code for file aims/bucket/bucket_g.h...
Generating code for file aims/bucket/bucketgen.h...
Generating code for file aims/bucket/bucketMap.h...
Generating code for file aims/bucket/bucketutil.h...
Generating code for file aims/bucket/bucketutil_d.h...
Generating code for file aims/bucket/item.h...
Generating code for file aims/bucket/sparsevolume.h...
Generating code for file aims/color/colormap.h...
Generating code for file aims/config/aimsdata_config.h...
Generating code for file aims/config/config.h...
Generating code for file aims/connectivity/component.h...
Generating code for file aims/connectivity/component_d.h...
Generating code for file aims/connectivity/connectivity.h...
Generating code for file aims/connectivity/connectivity_g.h...
Generating code for file aims/connectivity/structuring_element.h...
Generating code for file aims/curve/curve.h...
Generating code for file aims/data/cartodatavolume.h...
Generating code for file aims/data/data.h...
Generating code for file aims/data/data_g.h...
Generating code for file aims/data/fastAllocationData.h...
Generating code for file aims/data/header.h...
Generating code for file aims/data/headerutil.h...
Generating code for file aims/data/pheader.h...
Generating code for file aims/data/pheader_doc.h...
Generating code for file aims/data/sliceformatheader.h...
Generating code for file aims/qt backend: PyQt5
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 0 source files that are out of date
updating environment: 0 added, 0 changed, 0 removed
reading sources... 
looking for now-outdated files... none found
no targets are out of date.
build succeeded.

The HTML pages are in ../../share/doc/morphologist-ui-5.2/dev_doc.

generating indices... done
highlighting module code... 
writing additional pages... search done
copying static files... reading sources... [ 13%] bv_maker_help
done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... reading sources... [ 20%] bv_maker_help_build
done
build succeeded, 66 warnings.

The HTML pages are in ../../share/doc/casa-distro-3.2.
reading sources... [ 26%] bv_maker_help_configure
reading sources... [ 33%] bv_maker_help_doc
reading sources... [ 40%] bv_maker_help_info
reading sources... [ 46%] bv_maker_help_install_pack
reading sources... [ 53%] bv_maker_help_pack
reading sources... [ 60%] bv_maker_help_publish_pack
done
reading sources... [ 66%] bv_maker_help_sources
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
data/volumemanip.h...
Generating code for file aims/data/volumeoperators_aims.h...
Generating code for file aims/def/assert.h...
Generating code for file aims/def/def_g.h...
Generating code for file aims/def/general.h...
Generating code for file aims/def/info.h...
Generating code for file aims/def/path.h...
Generating code for file aims/def/settings.h...
Generating code for file aims/doc/aimsdata_doc.h...
Generating code for file aims/features/features.h...
Generating code for file aims/features/point_set_features.h...
Generating code for file aims/features/roi_features.h...
Generating code for file aims/features/scalar_set_features.h...
Generating code for file aims/fibers/bundleRegroup.h...
Generating code for file aims/fibers/bundles.h...
Generating code for file aims/fibers/bundles_features.h...
Generating code for file aims/fibers/bundleSampler.h...
Generating code for file aims/fibers/bundlesFusion.h...
Generating code for file aims/fibers/bundlesSlicer.h...
Generating code for file aims/fibers/fiberOversampler.h...
Generating code for file aims/fibers/mrtrixbundlereader.h...
Generating code for file aims/fibers/trackvisbundlereader.h...
Generating code for file aims/getopt/getopt2.h...
Generating code for file aims/getopt/getoptProcess.h...
Generating code for file aims/graph/graphmanip.h...
Generating code for file aims/graph/graphmanip_d.h...
Generating code for file aims/hsv/hsv.h...
Generating code for file aims/io/aimsGraphR.h...
Generating code for file aims/io/aimsGraphR_d.h...
Generating code for file aims/io/aimsGraphW.h...
Generating code for file aims/io/aimsGraphW_d.h...
Generating code for file aims/io/apcreader.h...
Generating code for file aims/io/argheader.h...
Generating code for file aims/io/argR.h...
Generating code for file aims/io/argW.h...
Generating code for file aims/io/baseFormats_bucket.h...
Generating code for file aims/io/baseFormats_bucket_d.h...
Generating code for file aims/io/baseFormats_cartovolume.h...
Generating code for file aims/io/baseFormats_genericobject.h...
Generating code for file aims/io/baseFormats_graph.h...
Generating code for file aims/io/baseFormats_hierarchy.h...
Generating code for file aims/io/baseFormats_mesh.h...
Generating code for file aims/io/baseFormats_mesh_d.h...
Generating code for file aims/io/baseFormats_sparsematrix.h...
Generating code for file aims/io/baseFormats_syntax.h...
Generating code for file aims/io/baseFormats_texture.h...
Generating code for file aims/io/baseFormats_texture_d.h...
Generating code for file aims/io/baseFormats_volume.h...
Generating code for file aims/io/baseFormats_volume_d.h...
Generating code for file aims/io/bckheader.h...
Generating code for file aims/io/bckItemR.h...
Generating code for file aims/io/bckItemW.h...
Generating code for file aims/io/bckMapR.h...
Generating code for file aims/io/bckMapW.h...
Generating code for file aims/io/bckR.h...
Generating code for file aims/io/bckW.h...
Generating code for file aims/io/byteswap.h...
Generating code for file aims/io/channelR.h...
Generating code for file aims/io/cmapR.h...
Generating code for file aims/io/cmapW.h...
Generating code for file aims/io/coarseR.h...
Generating code for file aims/io/datatypecode.h...
Generating code for file aims/io/dbh.h...
Generating code for file aims/io/defaultItemR.h...
Generating code for file aims/io/defaultItemW.h...
Generating code for file aims/io/directory.h...
Generating code for file aims/io/dtitensorItemR.h...
Generating code for file aims/io/dtitensorItemW.h...
Generating code for file aims/io/ecatfinderformat.h...
Generating code for file aims/io/ecatformat.h...
Generating code for file aims/io/ecatformat_d.h...
Generating code for file aims/io/ecatheader.h...
Generating code for file aims/io/ecatR.h...
Generating code for file aims/io/ecatSinoheader.h...
Generating code for file aims/io/ecatSinoR.h...
Generating code for file aims/io/ecatSinoW.h...
Generating code for file aims/io/ecatW.h...
Generating code for file aims/io/fdffinderformat.h...
Generating code for file aims/io/fdfformat.h...
Generating code for file aims/io/reading sources... [ 73%] bv_maker_help_status
[autosummary] generating autosummary for: api/api.rst, api/attributes.rst, api/engine.rst, api/in_context.rst, api/index.rst, api/info.rst, api/pipeline.rst, api/plugins.rst, api/process.rst, api/qt_apps.rst, ..., api/subprocess.rst, api/utils.rst, documentation.rst, index.rst, installation.rst, status.rst, tutorial/capsul_tutorial.ipynb, user_guide_tree/advanced_usage.rst, user_guide_tree/index.rst, user_guide_tree/xml_spec.rst
reading sources... [ 80%] bv_maker_help_test
reading sources... [ 86%] bv_maker_help_test_pack
reading sources... [ 93%] bv_maker_help_testref
reading sources... [100%] bv_maker_help_testref_pack

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [  6%] bv_maker
[ 95%] Built target morphologist-ui-sphinx
fdfformat_d.h...
Generating code for file aims/io/fdfheader.h...
Generating code for file aims/io/fdfprocpar.h...
Generating code for file aims/io/fdfprocpar_g.h...
Generating code for file aims/io/fdfR.h...
Generating code for file aims/io/fdfutil.h...
Generating code for file aims/io/fileFormat.h...
Generating code for file aims/io/fileFormat_cartovolume_d.h...
Generating code for file aims/io/fileFormat_d.h...
Generating code for file aims/io/finder.h...
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generating indices... genindex done
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build succeeded.

The HTML pages are in ../../share/doc/brainvisa-cmake-6.0.
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Generatingdone
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ims/resampling/linearInterpolator.h...
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  parameter 'src'
  parameter 'm'
/casa/host/build/include/aims/border/borderiterator.h:187: warning: argument 'move' of command @param is not found in the argument list of aims::BorderIterator&lt; T &gt;::const_iterator::computeNext(const Point4dl &amp;p) const
This plugin does not support propagateSizeHints()
 compound ChannelSelector&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; U &gt; &gt;...
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  parameter 'sampled_bundle_name'
/casa/host/build/include/aims/fibers/bundleSampler.h:76: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &amp;bundle_name, const std::string &amp;sampled_bundle_name, int mode, bool discarded) is not documented:
  parameter 'sampled_bundle_name'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
BundleInfo...
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Generating docs for compound ai/casa/host/build/include/aims/io/spmR.h:79: warning: argument 'border' of command @param is not found in the argument list of aims::SpmReader&lt; T &gt;::read(AimsData&lt; T &gt; &amp;thing, const carto::AllocatorContext &amp;context, carto::Object options)
/casa/host/build/include/aims/io/spmR.h:83: warning: The following parameters of aims::SpmReader::read(AimsData&lt; T &gt; &amp;thing, const carto::AllocatorContext &amp;context, carto::Object options) are not documented:
  parameter 'context'
  parameter 'options'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag &lt;region&gt; found
ms::ScaledEncoding...
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Generating docs for compound aims::RoiIteratorO/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/utility/progress.h:77: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 min, const T1 max, const T2 progressmin=(T2) 0, const T2 progressmax=(T2) 100, const std::string unit="%%", const int width=3, std::ostream &amp;stream=std::cout) is not documented:
  parameter 'stream'
/casa/host/build/include/aims/utility/progress.h:87: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 max, std::ostream &amp;stream=std::cout) is not documented:
  parameter 'stream'
/casa/host/build/include/aims/io/vidaR.h:67: warning: The following parameters of aims::VidaReader::read(AimsData&lt; T &gt; &amp;thing, const carto::AllocatorContext &amp;context, carto::Object options) are not documented:
  parameter 'context'
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f&lt; Graph &gt;...
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MeshFormat...
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Generating docs for compound carto:[autosummary] generating autosummary for: index.rst, pyaims_aimsalgo.rst, pyaims_aimsalgo_examples.rst, pyaims_algo.rst, pyaims_api_aims.rst, pyaims_api_aimsalgo.rst, pyaims_examples.rst, pyaims_examples_advanced.rst, pyaims_highlevel.rst, pyaims_lowlevel.rst, pyaims_modules_api.rst, pyaims_tutorial.rst, pyaims_tutorial_nb.ipynb, volume_orientation.ipynb
:RawConverter&lt; AimsRGBA, OUTP &gt;...
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build succeeded, 1 warning.

The HTML pages are in ../../../../share/doc/pyaims-5.2/sphinx.
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lookup cache used 14275/65536 hits=132510 misses=16798
finished...
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Using the default: a4!
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:05,195::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.
Doxygen version used: 1.9.1
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Parsing filuild/include/aims/ffd/tabulSpline.h...
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Parsing file /casa/host/build/include/anatomist/commands/cSelect.h...
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Parsing file /casa/host/build/include/anatomist/commands/cShowObject.h...
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Parsing file /casa/host/build/include/anatomist/control/abstractMenuHandler.h...
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Parsing file /casa/host/build/include/anatomist/control/backPixmap_P.h...
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Parsing file /casa/host/build/include/anatomist/control/coloredpixmap.h...
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Parsing file /casa/host/build/include/anatomist/control/controlConfig.h...
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Parsing file /casa/host/build/include/anatomist/control/qAbout.h...
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Parsing file /casa/host/build/include/anatomist/control/qObjTree.h...
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Parsing file /casa/host/build/include/anatomist/control/qWinTree.h...
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Parsing file /casa/host/build/include/anatomist/control/winconfigio.h...
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Parsing file /casa/host/build/include/anatomist/control/wPreferences.h...
Preprocessing /casa/host/build/include//casa/host/build/include/aims/math/bspline.h:181: warning: unbalanced grouping commands
/casa/host/build/include/aims/math/bspline.h:193: warning: unbalanced grouping commands
aims/io/roiselectorR.h...
Preprocessing /casa/host/build/include/aims/io/roigtmR.h...
Parsing file /casa/host/build/include/aims/io/roigtmR.h...
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Parsing file /casa/host/build/include/aims/io/roigtmW.h...
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Parsing file /casa/host/build/include/aims/math/curv2Diso.h...
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Parsing file /casa/host/build/include/aims/math/discriminantanalysis.h...
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Parsing file /casa/host/build/include/aims/math/discriminantanalysis_d.h...
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Parsing file /casa/host/build/include/aims/math/gradient.h...
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/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
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Parsing file /casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/splinefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/splinefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/splinefilter_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/splinefilter_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/types.h...
Parsing file /casa/host/build/include/aims/signalfilter/types.h...
Preprocessing /casa/host/build/include/aims/signalfilter/vfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/vfilter.h...
Preprocessing /casa/host/build/include/aims/spam/spam.h...
Parsing file /casa/host/build/include/aims/spam/spam.h...
Preprocessing /casa/host/build/include/aims/talairach/cramer.h...
Parsing file /casa/host/build/include/aims/talairach/cramer.h...
Preprocessing /casa/host/build/include/aims/talairach/talPoints.h...
Parsing file /casa/host/build/include/aims/talairach/talPoints.h...
Preprocessing /casa/host/build/include/aims/talairach/talairach.h...
Parsing file /casa/host/build/include/aims/talairach/talairach.h...
Preprocessing /casa/host/build/include/aims/talairach/talACPCNorm.h...
Parsing file /casa/host/build/include/aims/talairach/talACPCNorm.h...
Preprocessing /casa/host/build/include/aims/talairach/talBoxBase.h...
Parsing file /casa/host/build/include/aims/talairach/talBoxBase.h...
Preprocessing /casa/host/build/include/aims/talairach/talBox.h...
Parsing file /casa/host/build/include/aims/talairach/talBox.h...
Preprocessing /casa/host/build/include/aims/talairach/talVolume.h...
Parsing file /casa/host/build/include/aims/talairach/talVolume.h...
Preprocessing /casa/host/build/include/aims/talairach/talBoundingBoxPoints.h...
Parsing file /casa/host/build/include/aims/talairach/talBoundingBoxPoints.h...
Preprocessing /casa/host/build/include/aims/threshold/emthreshold.h...
Parsing file /casa/host/build/include/aims/threshold/emthreshold.h...
Preprocessing /casa/host/build/include/aims/topology/adjacency.h...
Parsing file /casa/host/build/include/aims/topology/adjacency.h...
Preprocessing /casa/host/build/include/aims/topology/cc18adjacent.h...
Parsing file /casa/host/build/include/aims/topology/cc18adjacent.h...
Preprocessing /casa/host/build/include/aims/topology/cc26adjacent.h...
Parsing file /casa/host/build/include/aims/topology/cc26adjacent.h...
Preprocessing /casa/host/build/include/aims/topology/cc6adjacent.h...
Parsing file /casa/host/build/include/aims/topology/cc6adjacent.h...
Preprocessing /casa/host/build/include/aims/topology/classifMeaning.h...
Parsing file /casa/host/build/include/aims/topology/classifMeaning.h...
Preprocessing /casa/host/build/include/aims/topology/components.h...
Parsing file /casa/host/build/include/aims/topology/components.h...
Preprocessing /casa/host/build/include/aims/topology/components18.h...
Parsing file /casa/host/build/include/aims/topology/components18.h...
Preprocessing /casa/host/build/include/aims/topology/components26.h...
Parsing file /casa/host/build/include/aims/topology/components26.h...
Preprocessing /casa/host/build/include/aims/topology/connectivity18.h...
Parsing file /casa/host/build/include/aims/topology/connectivity18.h...
Preprocessing /casa/host/build/include/aims/topology/connectivity26.h...
Parsing file /casa/host/build/include/aims/topology/connectivity26.h...
Preprocessing /casa/host/build/include/aims/topology/connectivity6.h...
Parsing file /casa/host/build/include/aims/topology/connectivity6.h...
Preprocessing /casa/host/build/include/aims/topology/relation.h...
Parsing file /casa/host/build/include/aims/topology/relation.h...
Preprocessing /casa/host/build/include/aims/topology/topoBase.h...
Parsing file /casa/host/build/include/aims/topology/topoBase.h...
Preprocessing /casa/host/build/include/aims/topology/topoClassif.h...
Pars/casa/host/build/share/doc/cartobase-5.2/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
Process2 execution, a: 0.000000, b: blop
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv' not fetchable due to &lt;class 'FileNotFoundError'&gt;: [Errno 2] No such file or directory: '/casa/host/build/share/doc/soma-base-5.2/sphinx/objects.inv'
[autosummary] generating autosummary for: ana_notebook.ipynb, auto_examples/activateaction.rst, auto_examples/addMenuEntry.rst, auto_examples/aimsvolumetest.rst, auto_examples/anaevensimplerviewer.rst, auto_examples/anagraphannotate.rst, auto_examples/anatomistapiTests.rst, auto_examples/bvProcessSocket.rst, auto_examples/control.rst, auto_examples/customcommands.rst, ..., pyanatomist_headless.rst, pyanatomist_howto.rst, pyanatomist_notebook.rst, pyanatomist_pyaims_tutorial.rst, pyanatomist_socket.rst, pyanatomist_threaded.rst, pyanatomist_tutorial.rst, pyanatomist_tutorial_nb.ipynb, pyanatomist_wip.rst, sg_execution_times.rst
Process2 execution, a: 0.000000, b: yup
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(iterator other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator*() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator-&gt;() const

&lt;unknown&gt;:1: warning: documented symbol 'const const_LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator==(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator!=(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &amp;other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::volume() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator*()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator-&gt;()

&lt;unknown&gt;:1: warning: documented symbol 'LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator==(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator!=(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::volume() const

/casa/host/build/include/anatomist/graph/AGraphIterator.h:109: warning: no matching class member found for 
  anatomist::AGraphIterator::AGraphIterator(const AGraphIterator::datatype::iterator &amp;thing)
Possible candidates:
  'anatomist::AGraphIterator::AGraphIterator(const datatype::iterator &amp;thing)'
  'anatomist::AGraphIterator::AGraphIterator(const AGraphIterator &amp;other)'

/casa/host/build/include/anatomist/graph/AGraphIterator.h:181: warning: no matching class member found for 
  anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator::datatype::const_iterator &amp;thing)
Possible candidates:
  'anatomist::const_AGraphIterator::const_AGraphIterator(const datatype::const_iterator &amp;thing)'
  'anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator &amp;other)'

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(iterator other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator*() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator-&gt;() const

&lt;unknown&gt;:1: warning: documented symbol 'const const_LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator==(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator!=(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &amp;other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::volume() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator*()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator-&gt;()

&lt;unknown&gt;:1: warning: documented symbol 'LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator==(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator!=(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::volume() const

/casa/host/build/include/aims/histogram/cumulated.h:72: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:83: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:105: warning: member valueForPercentage belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:457: warning: member X belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:506: warning: member Y belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:539: warning: member Z belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:572: warning: member T belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:607: warning: member XX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:612: warning: member XY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:617: warning: member XZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:622: warning: member XT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:628: warning: member YX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:633: warning: member YY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:638: warning: member YZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:643: warning: member YT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:649: warning: member ZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:654: warning: member ZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:659: warning: member ZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:664: warning: member ZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:670: warning: member TX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:675: warning: member TY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:680: warning: member TZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:685: warning: member TT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:693: warning: member XXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:698: warning: member XXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:703: warning: member XXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:708: warning: member XXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:714: warning: member XYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:719: warning: member XYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:724: warning: member XYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:729: warning: member XYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:735: warning: member XZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:740: warning: member XZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:745: warning: member XZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:750: warning: member XZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:756: warning: member XTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:761: warning: member XTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:766: warning: member XTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:771: warning: member XTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:777: warning: member YXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:782: warning: member YXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:787: warning: member YXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:792: warning: member YXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:798: warning: member YYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:803: warning: member YYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:808: warning: member YYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:813: warning: member YYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:819: warning: member YZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:824: warning: member YZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:829: warning: member YZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:834: warning: member YZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:840: warning: member YTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:845: warning: member YTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:850: warning: member YTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:855: warning: member YTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:861: warning: member ZXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:866: warning: member ZXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:871: warning: member ZXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:876: warning: member ZXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:882: warning: member ZYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:887: warning: member ZYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:892: warning: member ZYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:897: warning: member ZYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:903: warning: member ZZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:908: warning: member ZZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:913: warning: member ZZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:918: warning: member ZZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:924: warning: member ZTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:929: warning: member ZTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:934: warning: member ZTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:939: warning: member ZTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:945: warning: member TXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:950: warning: member TXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:955: warning: member TXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:960: warning: member TXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:966: warning: member TYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:971: warning: member TYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:976: warning: member TYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:981: warning: member TYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:987: warning: member TZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:992: warning: member TZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:997: warning: member TZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1002: warning: member TZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1008: warning: member TTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1013: warning: member TTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1018: warning: member TTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1023: warning: member TTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:93: warning: member UniformRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:144: warning: member GaussianRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:66: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionSubSampler&lt; F &gt;::ConvolutionSubSampler(const F &amp;f, unsigned r)
Possible candidates:
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(unsigned r=2)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const Point4du &amp;r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const BasisFunction &amp;bfunc, unsigned r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;(), const Point4du &amp;r=Point4du(2, 2, 2, 2))'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const ConvolutionSubSampler &amp;other)'

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:76: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionSubSampler&lt; F &gt;::ConvolutionSubSampler(const std::vector&lt; F &gt; &amp;f, const Point4du &amp;r)
Possible candidates:
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(unsigned r=2)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const Point4du &amp;r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const BasisFunction &amp;bfunc, unsigned r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;(), const Point4du &amp;r=Point4du(2, 2, 2, 2))'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const ConvolutionSubSampler &amp;other)'

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:87: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionSubSampler&lt; F &gt;::ConvolutionSubSampler(const aims::ConvolutionSubSampler&lt; F &gt; &amp;other)
Possible candidates:
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(unsigned r=2)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const Point4du &amp;r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const BasisFunction &amp;bfunc, unsigned r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;(), const Point4du &amp;r=Point4du(2, 2, 2, 2))'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const ConvolutionSubSampler &amp;other)'

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:284: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionSubSampler&lt; F &gt;::setBasisFunction(const F &amp;func)
Possible candidates:
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:290: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionSubSampler&lt; F &gt;::setBasisFunction(const std::vector&lt; F &gt; &amp;func)
Possible candidates:
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h

/casa/host/build/include/aims/resampling/masklinresampler_d.h:59: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::MaskLinearResampler::doResample(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform, const T &amp;background, const Point3df &amp;output_location, T &amp;output_value, int t) const

/casa/host/build/include/aims/resampling/masklinresampler_d.h:107: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::MaskLinearResampler::resample(const carto::Volume&lt; T &gt; &amp;input_data, const aims::AffineTransformation3d &amp;motion, const T &amp;background, carto::Volume&lt; T &gt; &amp;thing, bool verbose) const

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:49: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionFilter&lt; F &gt;::ConvolutionFilter(const F &amp;f)
Possible candidates:
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const BasisFunction &amp;bfunc)'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;())'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const ConvolutionFilter &amp;other)'

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:58: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionFilter&lt; F &gt;::ConvolutionFilter(const std::vector&lt; F &gt; &amp;f)
Possible candidates:
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const BasisFunction &amp;bfunc)'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;())'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const ConvolutionFilter &amp;other)'

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:67: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionFilter&lt; F &gt;::ConvolutionFilter(const aims::ConvolutionFilter&lt; F &gt; &amp;other)
Possible candidates:
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const BasisFunction &amp;bfunc)'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;())'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const ConvolutionFilter &amp;other)'

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:231: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionFilter&lt; F &gt;::setBasisFunction(const F &amp;func)
Possible candidates:
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:237: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionFilter&lt; F &gt;::setBasisFunction(const std::vector&lt; F &gt; &amp;func)
Possible candidates:
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:58: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::ElementFilterFactory::init()

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:85: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::map&lt; std::string, carto::rc_ptr&lt; ElementFilteringImageAlgorithm&lt; T &gt; &gt; &gt; &amp; aims::ElementFilterFactory::_map()

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:92: warning: documented symbol 'void aims::ElementFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:102: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::set&lt; std::string &gt; aims::ElementFilterFactory::names()

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:113: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  ElementFilteringImageAlgorithm&lt; T &gt; * aims::ElementFilterFactory::create(const std::string &amp;name, const StructuringElement &amp;strel, carto::Object options)

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:131: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  ElementFilteringImageAlgorithm&lt; T &gt; * aims::ElementFilterFactory::create(const std::string &amp;name, carto::Object options)

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:142: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MaxFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:148: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MaxFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:161: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MinFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:167: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MinFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:180: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:186: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:199: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:205: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:218: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:224: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:237: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:243: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:256: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:262: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:275: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:281: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:294: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:300: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:313: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::SumFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:319: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::SumFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:332: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::VarFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:338: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::VarFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:351: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::StDevFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:357: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::StDevFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:125: warning: documented symbol 'aims::GaborFilterFunc::GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:141: warning: documented symbol 'aims::GaborFilterFunc::~GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:145: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  GaborFilterFunc&lt; T &gt; &amp; aims::GaborFilterFunc::operator=(const GaborFilterFunc&lt; T &gt; &amp;other)

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:164: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::GaborFilterFunc::setOptions(const carto::Object &amp;options)

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:214: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::GaborFilterFunc::updateOptions(const carto::Object &amp;options)

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:291: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  const std::vector&lt; int &gt; &amp; aims::GaborFilterFunc::getAmplitude() const

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:297: warning: no matching file member found for 
void aims::GaborFilterFunc::setKernel
Possible candidates:
 'void setKernel()' at line 150 of file /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:357: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::GaborFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:46: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::LinearFilterFactory::init()

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:58: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::map&lt; std::string, carto::rc_ptr&lt; LinearFilteringImageAlgorithm&lt; T &gt; &gt; &gt; &amp; aims::LinearFilterFactory::_map()

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:65: warning: documented symbol 'void aims::LinearFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:75: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::set&lt; std::string &gt; aims::LinearFilterFactory::names()

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:86: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  LinearFilteringImageAlgorithm&lt; T &gt; * aims::LinearFilterFactory::create(const std::string &amp;name, carto::Object options)

Failed to import anatomist.altas_viewer.
Possible hints:
* ModuleNotFoundError: No module named 'anatomist.altas_viewer'
* AttributeError: module 'anatomist' has no attribute 'altas_viewer'
generating gallery...
generating gallery for auto_examples... [  4%] volumetest.py
generating gallery for auto_examples... [  8%] nomenclatureselection.py
generating gallery for auto_examples... [ 13%] graph.py
generating gallery for auto_examples... [ 17%] customcommands.py
generating gallery for auto_examples... [ 21%] events.py
generating gallery for auto_examples... [ 26%] addMenuEntry.py
generating gallery for auto_examples... [ 30%] fusion3D.py
generating gallery for auto_examples... [ 34%] selection.py
generating gallery for auto_examples... [ 39%] activateaction.py
generating gallery for auto_examples... [ 43%] graph_building.py
generating gallery for auto_examples... [ 47%] bvProcessSocket.py
generating gallery for auto_examples... [ 52%] aimsvolumetest.py
generating gallery for auto_examples... [ 56%] meshtest.py
generating gallery for auto_examples... [ 60%] sphere.py
generating gallery for auto_examples... [ 65%] fusion.py
generating gallery for auto_examples... [ 69%] ellipsoid.py
generating gallery for auto_examples... [ 73%] control.py
generating gallery for auto_examples... [ 78%] anagraphannotate.py
generating gallery for auto_examples... [ 82%] customopenglobject.py
generating gallery for auto_examples... [ 86%] volumeMeasures.py
generating gallery for auto_examples... [ 91%] anaevensimplerviewer.py
generating gallery for auto_examples... [ 95%] texturedrawing.py
generating gallery for auto_examples... [100%] anatomistapiTests.py
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved

/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
computation time summary:
    - ../examples/activateaction.py:          0.00 sec   0.0 MB
    - ../examples/addMenuEntry.py:            0.00 sec   0.0 MB
    - ../examples/aimsvolumetest.py:          0.00 sec   0.0 MB
    - ../examples/anaevensimplerviewer.py:    0.00 sec   0.0 MB
    - ../examples/anagraphannotate.py:        0.00 sec   0.0 MB
    - ../examples/anatomistapiTests.py:       0.00 sec   0.0 MB
    - ../examples/bvProcessSocket.py:         0.00 sec   0.0 MB
    - ../examples/control.py:                 0.00 sec   0.0 MB
    - ../examples/customcommands.py:          0.00 sec   0.0 MB
    - ../examples/customopenglobject.py:      0.00 sec   0.0 MB
    - ../examples/ellipsoid.py:               0.00 sec   0.0 MB
    - ../examples/events.py:                  0.00 sec   0.0 MB
    - ../examples/fusion.py:                  0.00 sec   0.0 MB
    - ../examples/fusion3D.py:                0.00 sec   0.0 MB
    - ../examples/graph.py:                   0.00 sec   0.0 MB
    - ../examples/graph_building.py:          0.00 sec   0.0 MB
    - ../examples/meshtest.py:                0.00 sec   0.0 MB
    - ../examples/nomenclatureselection.py:   0.00 sec   0.0 MB
    - ../examples/selection.py:               0.00 sec   0.0 MB
    - ../examples/sphere.py:                  0.00 sec   0.0 MB
    - ../examples/texturedrawing.py:          0.00 sec   0.0 MB
    - ../examples/volumeMeasures.py:          0.00 sec   0.0 MB
    - ../examples/volumetest.py:              0.00 sec   0.0 MB
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 0 source files that are out of date
updating environment: /casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/surface/glcomponent.h:152: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:149: warning: explicit link request to 'texnum' could not be resolved
0 added, 1 changed, 0 removed
reading sources... [100%] pyanatomist_addons
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
[ 95%] Built target axon-sphinx
ing file /casa/host/build/include/aims/topology/topoClassif.h...
Preprocessing /casa/host/build/include/aims/topology/topoClassifBase.h...
Parsing file /casa/host/build/include/aims/topology/topoClassifBase.h...
Preprocessing /casa/host/build/include/aims/topology/topoClassifier.h...
Parsing file /casa/host/build/include/aims/topology/topoClassifier.h...
Preprocessing /casa/host/build/include/aims/topology/topology.h...
Parsing file /casa/host/build/include/aims/topology/topology.h...
Preprocessing /casa/host/build/include/aims/transform/fft1d.h...
Parsing file /casa/host/build/include/aims/transform/fft1d.h...
Preprocessing /casa/host/build/include/aims/transform/hilbert1d.h...
Parsing file /casa/host/build/include/aims/transform/hilbert1d.h...
Preprocessing /casa/host/build/include/aims/transform/least_square_estimation.h...
Parsing file /casa/host/build/include/aims/transform/least_square_estimation.h...
Preprocessing /casa/host/build/include/aims/transform/rigidestimation.h...
Parsing file /casa/host/build/include/aims/transform/rigidestimation.h...
Preprocessing /casa/host/build/include/aims/transform/transform_objects.h...
Parsing file /casa/host/build/include/aims/transform/transform_objects.h...
Preprocessing /casa/host/build/include/aims/transform/transform_objects_d.h...
Parsing file /casa/host/build/include/aims/transform/transform_objects_d.h...
Preprocessing /casa/host/build/include/aims/utility/dynamic.h...
Parsing file /casa/host/build/include/aims/utility/dynamic.h...
Preprocessing /casa/host/build/include/aims/utility/dynamic_d.h...
Parsing file /casa/host/build/include/aims/utility/dynamic_d.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating example documentation...
Generating file sources...
Generating code for file aims/algorithm/imagealgorithm.h...
Generating code for file aims/classification/classifstrategy.h...
Generating code for file aims/classification/classifstrategy_d.h...
Generating code for file aims/classification/distance.h...
Generating code for file aims/classification/distance_d.h...
Generating code for file aims/classification/dynamicstrategy.h...
Generating code for file aims/classification/dynamicstrategy_d.h...
Generating code for file aims/classification/individuals.h...
Generating code for file aims/classification/individuals_d.h...
Generating code fo[ 95%] Create "share/doc/5.2"
[ 95%] Built target axon-devdoc
o/histoWin.h...
Parsing file /casa/host/build/include/anatomist/winhisto/histoWin.h...
Preprocessing /casa/host/build/include/anatomist/winhisto/histo.h...
Parsing file /casa/host/build/include/anatomist/winhisto/histo.h...
Preprocessing /casa/host/build/include/anatomist/module/histogram.h...
Parsing file /casa/host/build/include/anatomist/module/histogram.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file anatomist/action/blobsegmentation.h...
Generating code for file anatomist/action/dynsegmentaction.h...
Generating code for file anatomist/action/histoplot.h...
Generating code for file anatomist/action/labelnaming.h...
Generating code for file anatomist/action/levelsetaction.h...
Generating code for file anatomist/action/morphomath.h...
Generating code for file anatomist/action/nodeselectionaction.h...
Generating code for file anatomist/action/paintaction.h...
Generating code for file anatomist/action/roichangeprocessor.h...
Generating code for file anatomist/action/roimanagementaction.h...
Generating code for file anatomist/action/surfpaintaction.h...
Generating code for file anatomist/application/Anatomist.h...
Generating code for file anatomist/application/anatomist_doc.h...
Generating code for file anatomist/application/anatomistinfo.h...
Generating code for file anatomist/application/fileDialog.h...
Generating code for file anatomist/application/filedialogextension.h...
Generating code for file anatomist/application/globalConfig.h...
Generating code for file anatomist/application/hierarchyeditor.h...
Generating code for file anatomist/application/listDir.h...
Generating code for file anatomist/application/localConfig.h...
Generating code for file anatomist/application/module.h...
Generating code for file anatomist/application/roialgomodule.h...
Generating code for file anatomist/application/roibasemodule.h...
Generating code for file anatomist/application/settings.h...
Generating code for file anatomist/application/syntax.h...
Generating code for file anatomist/browser/attDescr.h...
Generating code for file anatomist/browser/attributedchooser.h...
Generating code for file anatomist/browser/browsercontrol.h...
Generating code for file anatomist/browser/labeledit.h...
Generating code for file anatomist/browser/qObjBrowserWid.h...
Generating code for file anatomist/browser/qwObjectBrowser.h...
Generating code for file anatomist/browser/stringEdit.h...
Generating code for file anatomist/bucket/Bucket.h...
Generating code for file anatomist/color/colortraits.h...
Generating code for file anatomist/color/Light.h...
Generating code for file anatomist/color/Material.h...
Generating code for file anatomist/color/minipalette.h...
Generating code for file anatomist/color/objectPalette.h...
Generating code for file anatomist/color/palette.h...
Generating code for file anatomist/color/paletteList.h...
Generating code for file anatomist/color/paletteselectwidget.h...
Generating code for file anatomist/color/qwObjPalette.h...
Generating code for file anatomist/color/wMaterial.h...
Generating code for file anatomist/color/wObjPalette.h...
Generating code for file anatomist/color/wRendering.h...
Generating code for file anatomist/commands/cActivateAction.h...
Generating code for file anatomist/commands/cAddNode.h...
Generating code for file anatomist/commands/cAddObject.h...
Generating code for file anatomist/commands/cApplyBuiltinReferential.h...
Generating code for file anatomist/commands/cAskTexExtrema.h...
Generating code for file anatomist/commands/cAssignReferential.h...
Generating code for file anatomist/commands/cCamera.h...
Generating code for file anatomist/commands/cChangePalette.h...
Generating code for file anatomist/commands/cClosePipe.h...
Generating code for file anatomist/commands/cCloseWindow.h...
Generating code for file anatomist/commands/cControlsParams.h...
Generating code for file anatomist/commands/cCreateControlWindow.h...
Generating code for file anatomist/commands/cCreateGraph.h...
Generating code for file anatomist/commands/cCreateWindow.h...
Generating code for file anatomist/commands/cCreateWindowsBlock.h...
Generating code for file anatomist/commands/cDeleteAll.h...
Generating code for file anatomist/commands/cDeleteElement.h...
Generating code for file anatomist/commands/cDeleteObject.h...
Generating code for file anatomist/commands/cDuplicateObject.h...
Generating code for file anatomist/commands/cEventFilter.h...
Generating code for file anatomist/commands/cExit.h...
Generating code for file anatomist/commands/cExportTexture.h...
Generating code for file anatomist/commands/cExternalReference.h...
Generating code for file anatomist/commands/cExtractTexture.h...
Generating code for file anatomist/commands/cFusion2DParams.h...
Generating code for file anatomist/commands/cFusion3DParams.h...
Generating code for file anatomist/commands/cFusionInfo.h...
Generating code for file anatomist/commands/cFusionObjects.h...
Generating code for file anatomist/commands/cGenerateTexture.h...
Generating code for file anatomist/commands/cGetConnThres.h...
Generating code for file anatomist/commands/cGetInfo.h...
Generating code for file anatomist/commands/cGraphDisplayProperties.h...
Generating code for file anatomist/commands/cGraphParams.h...
Generating code for file anatomist/commands/cGroupObjects.h...
Generating code for file anatomist/commands/cLinkedCursor.h...
Generating code for file anatomist/commands/cLinkWindows.h...
Generating code for file anatomist/commands/cLoadGraphSubObjects.h...
Generating code for file anatomist/commands/cLoadObject.h...
Generating code for file anatomist/commands/cLoadObjects.h...
Generating code for file anatomist/commands/cLoadTransformation.h...
Generating code for file anatomist/commands/cLoadTransformationGraph.h...
Generating code for file anatomist/commands/cNewId.h...
Generating code for file anatomist/commands/cNewPalette.h...
Generating code for file anatomist/commands/cObjectInfo.h...
Generating code for file anatomist/commands/cOutput.h...
Generating code for file anatomist/commands/cPaintParams.h...
Generating code for file anatomist/commands/cPopupPalette.h...
Generating code for file anatomist/commands/cReloadObject.h...
Generating code for file anatomist/commands/cRemoveObject.h...
Generating code for file anatomist/commands/cSaveObject.h...
Generating code for file anatomist/commands/cSaveTransformation.h...
Gener file aims/classification/iterativeclassification.h...
Generating code for file aims/classification/iterativeclassification_d.h...
Generating code for file aims/classification/kmeansstrategy.h...
Generating code for file aims/classification/kmeansstrategy_d.h...
Generating code for file aims/classification/mixtureOfPpca.h...
Generating code for file aims/classification/mixtureOfPpca_d.h...
Generating code for file aims/classification/pcastrategy.h...
Generating code for file aims/classification/pcastrategy_d.h...
Generating code for file aims/classification/softDecSimilarityCompAnalysis.h...
Generating code for file aims/compression/compression_g.h...
Generating code for file aims/compression/huffman.h...
Generating code for file aims/compression/lz.h...
Generating code for file aims/compression/lzhl.h...
Generating code for file aims/config/aimsalgo_config.h...
Generating code for file aims/connectivity/meshcc.h...
Generating code for file aims/connectivity/meshcc_d.h...
Generating code for file aims/distancemap/advection.h...
Generating code for file aims/distancemap/chamfer.h...
Generating code for file aims/distancemap/danielsson.h...
Generating code for file aims/distancemap/distancemap_g.h...
Generating code for file aims/distancemap/downpath.h...
Generating code for file aims/distancemap/fastmarching.h...
Generating code for file aims/distancemap/front.h...
Generating code for file aims/distancemap/mask.h...
Generating code for file aims/distancemap/meshdistance.h...
Generating code for file aims/distancemap/meshdistance_d.h...
Generating code for file aims/distancemap/meshmorphomat.h...
Generating code for file aims/distancemap/meshmorphomat_d.h...
Generating code for file aims/distancemap/meshparcellation.h...
Generating code for file aims/distancemap/meshparcellation_d.h...
Generating code for file aims/distancemap/meshvoronoi.h...
Generating code for file aims/distancemap/meshvoronoi_d.h...
Generating code for file aims/distancemap/projection.h...
Generating code for file aims/distancemap/stlsort.h...
Generating code for file aims/distancemap/thickness.h...
Generating code for file aims/distancemap/voronoi.h...
Generating code for file aims/estimation/estimation_g.h...
Generating code for file aims/estimation/gmlfunc.h...
Generating code for file aims/estimation/lms-estimator.h...
Generating code for file aims/estimation/m-estimator.h...
Generating code for file aims/estimation/m-func.h...
Generating code for file aims/estimation/medfunc.h...
Generating code for file aims/pyramid/medfunc.h...
Generating code for file aims/estimation/msfunc.h...
Generating code for file aims/estimation/wlms-estimator.h...
Generating code for file aims/fastComputation/tabulation.h...
Generating code for file aims/ffd/tabulSpline.h...
Generating code for file aims/fibers/fiberDistance.h...
Generating code for file aims/foldgraph/foldgraphattributes.h...
Generating code for file aims/foldgraph/foldoversegmentation.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_base.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_dijkstra.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_dijkstra_alternative.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_exact.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_exact_elements.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_graph_base.h...
Generating code for file aims/geodesicpath/geodesic_algorithm_subdivision.h...
Generating code for file aims/geodesicpath/geodesic_constants_and_simple_functions.h...
Generating code for file aims/geodesicpath/geodesic_memory.h...
Generating code for file aims/geodesicpath/geodesic_mesh.h...
Generating code for file aims/geodesicpath/geodesic_mesh_elements.h...
Generating code for file aims/geodesicpath/geodesicPath.h...
Generating code for file aims/histogram/cumulated.h...
Generating code for file aims/histogram/equalizedHisto.h...
Generating code for file aims/histogram/histogram.h...
Generating code for file aims/histogram/histogram_g.h...
Generating rating code for file anatomist/commands/cSaveTransformationGraph.h...
Generating code for file anatomist/commands/cSelect.h...
Generating code for file anatomist/commands/cSelectByHierarchy.h...
Generating code for file anatomist/commands/cServer.h...
Generating code for file anatomist/commands/cSetConnThres.h...
Generating code for file anatomist/commands/cSetControl.h...
Generating code for file anatomist/commands/cSetMaterial.h...
Generating code for file anatomist/commands/cSetObjectPalette.h...
Generating code for file anatomist/commands/cShowObject.h...
Generating code for file anatomist/commands/cSliceParams.h...
Generating code for file anatomist/commands/cTexturingParams.h...
Generating code for file anatomist/commands/cWindowBlock.h...
Generating code for file anatomist/commands/cWindowConfig.h...
Generating code for file anatomist/config/anatomist_config.h...
Generating code for file anatomist/constrainteditor/wConstraintEditor.h...
Generating code for file anatomist/control/abstractMenuHandler.h...
Generating code for file anatomist/control/backPixmap_P.h...
Generating code for file anatomist/control/coloredpixmap.h...
Generating code for file anatomist/control/controlConfig.h...
Generating code for file anatomist/control/controlMenuHandler.h...
Generating code for file anatomist/control/dynsegmentcontrol.h...
Generating code for file anatomist/control/graphParams.h...
Generating code for file anatomist/control/labelnamingcontrol.h...
Generating code for file anatomist/control/levelsetcontrol.h...
Generating code for file anatomist/control/listboxeditor.h...
Generating code for file anatomist/control/nodeselectioncontrol.h...
Generating code for file anatomist/control/objectDrag.h...
Generating code for file anatomist/control/paintcontrol.h...
Generating code for file anatomist/control/qAbout.h...
Generating code for file anatomist/control/qImageLabel.h...
Generating code for file anatomist/control/qObjTree.h...
Generating code for file anatomist/control/qWinTree.h...
Generating code for file anatomist/control/surfpaintcontrol.h...
Generating code for file anatomist/control/toolTips-qt.h...
Generating code for file anatomist/control/wControl.h...
Generating code for file anatomist/control/wcontrolevents.h...
Generating code for file anatomist/control/whatsNew.h...
Generating code for file anatomist/control/winconfigio.h...
Generating code for file anatomist/control/windowdrag.h...
Generating code for file anatomist/control/wPreferences.h...
Generating code for file anatomist/controler/action.h...
Generating code for file anatomist/controler/actiondictionary.h...
Generating code for file anatomist/controler/actionpool.h...
Generating code for file anatomist/controler/control.h...
Generating code for file anatomist/controler/control_d.h...
Generating code for file anatomist/controler/controldictionary.h...
Generating code for file anatomist/controler/controlgroupdictionary.h...
Generating code for file anatomist/controler/controlmanager.h...
Generating code for file anatomist/controler/controlswitch.h...
Generating code for file anatomist/controler/icondictionary.h...
Generating code for file anatomist/controler/view.h...
Generating code for file anatomist/dialogs/colorDialog.h...
Generating code for file anatomist/dialogs/colorWidget.h...
Generating code for file anatomist/dialogs/qclickgraphicsview.h...
Generating code for file anatomist/dialogs/qmagnetslider.h...
Generating code for file anatomist/dialogs/qScopeLineEdit.h...
Generating code for file anatomist/erpio/erpR.h...
Generating code for file anatomist/erpio/erpWraper.h...
Generating code for file anatomist/fusion/defFusionMethods.h...
Generating code for file anatomist/fusion/fusionChooser.h...
Generating code for file anatomist/fusion/fusionFactory.h...
Generating code for file anatomist/gradientwidget/gradient.h...
Generating code for file anatomist/gradientwidget/gradwidget.h...
Generating code for file anatomist/gradientwidget/spline.h...
Generating code for file anatomist/graph/AGraphIterator.h...
Generating code for file anatomist/graph/attribA
WARNING: multiple files found for the document "auto_examples/activateaction": ['auto_examples/activateaction.codeobj.json', 'auto_examples/activateaction.ipynb', 'auto_examples/activateaction.zip', 'auto_examples/activateaction.rst', 'auto_examples/activateaction.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/activateaction.rst' for the build.
WARNING: multiple files found for the document "auto_examples/addMenuEntry": ['auto_examples/addMenuEntry.codeobj.json', 'auto_examples/addMenuEntry.ipynb', 'auto_examples/addMenuEntry.rst', 'auto_examples/addMenuEntry.zip', 'auto_examples/addMenuEntry.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/addMenuEntry.rst' for the build.
WARNING: multiple files found for the document "auto_examples/aimsvolumetest": ['auto_examples/aimsvolumetest.ipynb', 'auto_examples/aimsvolumetest.rst', 'auto_examples/aimsvolumetest.py.md5', 'auto_examples/aimsvolumetest.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/aimsvolumetest.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anaevensimplerviewer": ['auto_examples/anaevensimplerviewer.ipynb', 'auto_examples/anaevensimplerviewer.py.md5', 'auto_examples/anaevensimplerviewer.py', 'auto_examples/anaevensimplerviewer.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/anaevensimplerviewer.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anagraphannotate": ['auto_examples/anagraphannotate.ipynb', 'auto_examples/anagraphannotate.py', 'auto_examples/anagraphannotate.rst', 'auto_examples/anagraphannotate.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/anagraphannotate.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anatomistapiTests": ['auto_examples/anatomistapiTests.codeobj.json', 'auto_examples/anatomistapiTests.ipynb', 'auto_examples/anatomistapiTests.rst', 'auto_examples/anatomistapiTests.zip', 'auto_examples/anatomistapiTests.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/anatomistapiTests.rst' for the build.
WARNING: multiple files found for the document "auto_examples/bvProcessSocket": ['auto_examples/bvProcessSocket.rst', 'auto_examples/bvProcessSocket.codeobj.json', 'auto_examples/bvProcessSocket.ipynb', 'auto_examples/bvProcessSocket.py', 'auto_examples/bvProcessSocket.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/bvProcessSocket.rst' for the build.
WARNING: multiple files found for the document "auto_examples/control": ['auto_examples/control.ipynb', 'auto_examples/control.xpm', 'auto_examples/control.py.md5', 'auto_examples/control.py', 'auto_examples/control.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/control.rst' for the build.
WARNING: multiple files found for the document "auto_examples/customcommands": ['auto_examples/customcommands.codeobj.json', 'auto_examples/customcommands.py', 'auto_examples/customcommands.ipynb', 'auto_examples/customcommands.zip', 'auto_examples/customcommands.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/customcommands.rst' for the build.
WARNING: multiple files found for the document "auto_examples/customopenglobject": ['auto_examples/customopenglobject.py.md5', 'auto_examples/customopenglobject.ipynb', 'auto_examples/customopenglobject.rst', 'auto_examples/customopenglobject.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/customopenglobject.rst' for the build.
WARNING: multiple files found for the document "auto_examples/ellipsoid": ['auto_examples/ellipsoid.rst', 'auto_examples/ellipsoid.py.md5', 'auto_examples/ellipsoid.py', 'auto_examples/ellipsoid.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/ellipsoid.rst' for the build.
WARNING: multiple files found for the document "auto_examples/events": ['auto_examples/events.rst', 'auto_examples/events.codeobj.json', 'auto_examples/events.py', 'auto_examples/events.ipynb', 'auto_examples/events.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/events.rst' for the build.
WARNING: multiple files found for the document "auto_examples/fusion": ['auto_examples/fusion.rst', 'auto_examples/fusion.py', 'auto_examples/fusion.zip', 'auto_examples/fusion.codeobj.json', 'auto_examples/fusion.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/fusion.rst' for the build.
WARNING: multiple files found for the document "auto_examples/fusion3D": ['auto_examples/fusion3D.py', 'auto_examples/fusion3D.ipynb', 'auto_examples/fusion3D.py.md5', 'auto_examples/fusion3D.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/fusion3D.rst' for the build.
WARNING: multiple files found for the document "auto_examples/graph": ['auto_examples/graph.ipynb', 'auto_examples/graph.py.md5', 'auto_examples/graph.py', 'auto_examples/graph.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/graph.rst' for the build.
WARNING: multiple files found for the document "auto_examples/graph_building": ['auto_examples/graph_building.ipynb', 'auto_examples/graph_building.py.md5', 'auto_examples/graph_building.py', 'auto_examples/graph_building.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/graph_building.rst' for the build.
WARNING: multiple files found for the document "auto_examples/meshtest": ['auto_examples/meshtest.py', 'auto_examples/meshtest.rst', 'auto_examples/meshtest.py.md5', 'auto_examples/meshtest.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/meshtest.rst' for the build.
WARNING: multiple files found for the document "auto_examples/nomenclatureselection": ['auto_examples/nomenclatureselection.py', 'auto_examples/nomenclatureselection.ipynb', 'auto_examples/nomenclatureselection.rst', 'auto_examples/nomenclatureselection.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/nomenclatureselection.rst' for the build.
WARNING: multiple files found for the document "auto_examples/selection": ['auto_examples/selection.ipynb', 'auto_examples/selection.rst', 'auto_examples/selection.py.md5', 'auto_examples/selection.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/selection.rst' for the build.
WARNING: multiple files found for the document "auto_examples/sphere": ['auto_examples/sphere.py', 'auto_examples/sphere.codeobj.json', 'auto_examples/sphere.zip', 'auto_examples/sphere.ipynb', 'auto_examples/sphere.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/sphere.rst' for the build.
WARNING: multiple files found for the document "auto_examples/texturedrawing": ['auto_examples/texturedrawing.zip', 'auto_examples/texturedrawing.ipynb', 'auto_examples/texturedrawing.py', 'auto_examples/texturedrawing.codeobj.json', 'auto_examples/texturedrawing.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/texturedrawing.rst' for the build.
WARNING: multiple files found for the document "auto_examples/volumeMeasures": ['auto_examples/volumeMeasures.ipynb', 'auto_examples/volumeMeasures.codeobj.json', 'auto_examples/volumeMeasures.zip', 'auto_examples/volumeMeasures.rst', 'auto_examples/volumeMeasures.py']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/volumeMeasures.rst' for the build.
WARNING: multiple files found for the document "auto_examples/volumetest": ['auto_examples/volumetest.py.md5', 'auto_examples/volumetest.py', 'auto_examples/volumetest.rst', 'auto_examples/volumetest.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/auto_examples/volumetest.rst' for the build.
/casa/host/build/python/anatomist/cpp/followerobject.py:docstring of anatomist.cpp.followerobject:6: WARNING: Inline literal start-string without end-string.
WARNING: autodoc: failed to import module 'altas_viewer' from module 'anatomist'; the following exception was raised:
No module named 'anatomist.altas_viewer'
looking for now-outdated files... none found
pickling environment... code for file aims/histogram/regularBinnedHisto.h...
Generating code for file aims/histogram/simpleHisto.h...
Generating code for file aims/information/information.h...
Generating code for file aims/information/pdf.h...
Generating code for file aims/interpolation/interpolatedvolume.h...
Generating code for file aims/interpolation/interpolatedvolume_d.h...
Generating code for file aims/io/roigtmR.h...
Generating code for file aims/io/roigtmW.h...
Generating code for file aims/io/roiselectorR.h...
Generating code for file aims/math/balanc.h...
Generating code for file aims/math/balbak.h...
Generating code for file aims/math/bessel.h...
Generating code for file aims/math/bspline.h...
Generating code for file aims/math/bspline2.h...
Generating code for file aims/math/bspline3.h...
Generating code for file aims/math/curv2Diso.h...
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Generating code for file aims/math/discriminantanalysis.h...
Generating code for file aims/math/discriminantanalysis_d.h...
Generating code for file aims/math/distspheric.h...
Generating code for file aims/math/eigen.h...
Generating code for file aims/math/elmhes.h...
Generating code for file aims/math/eltran.h...
Generating code for file aims/math/gaussj.h...
Generating code for file aims/math/geometry.h...
Generating code for file aims/math/gradient.h...
Generating code for file aims/math/harris.h...
Generating code for file aims/math/householder.h...
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Generating code for file aims/mesh/curv.h...
Generating code for file aims/mesh/facet.h...
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Generating code for file aims/mesh/inflate.h...
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Generating code for file aims/mesh/meshwatershed.h...
Generating code for file aims/moment/geomMoment.h...
Generating code for file aims/moment/momBase.h...
Generating code for file aims/moment/moment.h...
Generating code for file aims/moment/moment_g.h...
Generating code for file aims/moment/momFactory.h...
Generating code for file aims/moment/momIncStgy.h...
Generating code for file aims/moment/momInvariant.h...
Generating code for file aims/moment/momNormStgy.h...
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Generating code for file aims/moment/momSurfStgy.h...
Generating code for file aims/moment/momTriFactory.h...
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Generating code for file aims/moment/momVolStgy.h...
Generating code for file aims/moment/triMoment.h...
Generating code for file aims/morphology/morphogreylevel_d.h...
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Generating code for file aims/morphology/operatormorpho.h...
Generating code for file aims/mpi/types.h...
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Generating code for file aims/optimization/covsrt.h...
Generating code for file aims/optimization/deterministic.h...
Generating code for file aims/optimization/levmrq.h...
Generating code for file aims/optimization/lm2gauss.h...
Generating code for file aims/optimization/lmfunc.h...
Generating code for file aims/optimization/lmgamma.h...
Generating code for Object.h...
Generating code for file anatomist/graph/Graph.h...
Generating code for file anatomist/graph/GraphObject.h...
Generating code for file anatomist/graph/pythonAObject.h...
Generating code for file anatomist/graph/qgraphproperties.h...
Generating code for file anatomist/hierarchy/hierarchy.h...
Generating code for file anatomist/interface/qwSurfMatch.h...
Generating code for file anatomist/interpoler/interpoler.h...
Generating code for file anatomist/interpoler/interpolMethod.h...
Generating code for file anatomist/landmark/graphLandmark.h...
Generating code for file anatomist/landmark/landmFactory.h...
Generating code for file anatomist/landmark/landmPicker.h...
Generating code for file anatomist/landmark/plane.h...
Generating code for file anatomist/misc/error.h...
Generating code for file anatomist/mobject/Fusion2D.h...
Generating code for file anatomist/mobject/Fusion3D.h...
Generating code for file anatomist/mobject/glmobject.h...
Generating code for file anatomist/mobject/globjectlist.h...
Generating code for file anatomist/mobject/globjectvector.h...
Generating code for file anatomist/mobject/MObject.h...
Generating code for file anatomist/mobject/ObjectList.h...
Generating code for file anatomist/mobject/objectVector.h...
Generating code for file anatomist/mobject/wFusion2D.h...
Generating code for file anatomist/mobject/wFusion3D.h...
Generating code for file anatomist/module/anasurfmatch.h...
Generating code for file anatomist/module/histogram.h...
Generating code for file anatomist/module/profile.h...
Generating code for file anatomist/module/surfpaintmodule.h...
Generating code for file anatomist/module/surfpainttools.h...
Generating code for file anatomist/module/volrenderfusionmethod.h...
Generating code for file anatomist/module/volrendermodule.h...
Generating code for file anatomist/object/actions.h...
Generating code for file anatomist/object/clippedobject.h...
Generating code for file anatomist/object/loadevent.h...
Generating code for file anatomist/object/mobjectio.h...
Generating code for file anatomist/object/Object.h...
Generating code for file anatomist/object/objectConverter.h...
Generating code for file anatomist/object/objectmenu.h...
Generating code for file anatomist/object/objectmenuCallbacks.h...
Generating code for file anatomist/object/objectparamselect.h...
Generating code for file anatomist/object/objectutils.h...
Generating code for file anatomist/object/objectutils_d.h...
Generating code for file anatomist/object/optionMatcher.h...
Generating code for file anatomist/object/oReader.h...
Generating code for file anatomist/object/qtextureparams.h...
Generating code for file anatomist/object/selfsliceable.h...
Generating code for file anatomist/object/sliceable.h...
Generating code for file anatomist/object/texturepanel.h...
Generating code for file anatomist/object/texturewin.h...
Generating code for file anatomist/object/volrender.h...
Generating code for file anatomist/object/volrenderpanel.h...
Generating code for file anatomist/object/volrendershader.h...
Generating code for file anatomist/observer/Observable.h...
Generating code for file anatomist/observer/observcreat.h...
Generating code for file anatomist/observer/Observer.h...
Generating code for file anatomist/primitive/primitive.h...
Generating code for file anatomist/processor/Command.h...
Generating code for file anatomist/processor/context.h...
Generating code for file anatomist/processor/errormessage.h...
Generating code for file anatomist/processor/event.h...
Generating code for file anatomist/processor/event_doc.h...
Generating code for file anatomist/processor/pipeReader.h...
Generating code for file anatomist/processor/pipeReaderP.h...
Generating code for file anatomist/processor/Processor.h...
Generating code for file anatomist/processor/Reader.h...
Generating code for file anatomist/processor/Registry.h...
Generating code for file anatomist/processor/Serializer.h...
Generating code for file anatomist/processor/server.h...
Generating code for file anatomist/processor/unserializer.h...
Generating code for file file aims/optimization/lmgauss.h...
Generating code for file aims/optimization/objective.h...
Generating code for file aims/optimization/optimization_g.h...
Generating code for file aims/optimization/optimizer.h...
Generating code for file aims/optimization/powell.h...
Generating code for file aims/optimization/singleoptimizer.h...
Generating code for file aims/points_distribution/points_distribution.h...
Generating code for file aims/primalsketch/coupledDiffusion2DSmoother.h...
Generating code for file aims/primalsketch/coupledDiffusion2DSmoother_d.h...
Generating code for file aims/primalsketch/coupledSmoother.h...
Generating code for file aims/primalsketch/dericheSmoother.h...
Generating code for file aims/primalsketch/dericheSmoother_d.h...
Generating code for file aims/primalsketch/finiteElementSmoother.h...
Generating code for file aims/primalsketch/finiteElementSmoother_d.h...
Generating code for file aims/primalsketch/greyLevelBlob.h...
Generating code for file aims/primalsketch/imageCoupledSmoother.h...
Generating code for file aims/primalsketch/imageSmoother.h...
Generating code for file aims/primalsketch/peronaMalikSmoother.h...
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Generating code for file aims/primalsketch/primalSketch.h...
Generating code for file aims/primalsketch/primalSketch2graph.h...
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Generating code for file aims/primalsketch/scaleLevel.h...
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Generating code for file aims/pyramid/convolutionsubsampler.h...
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Generating code for file aims/pyramid/maxfunc.h...
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Generating code for file aims/registration/block_matching.h...
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Generating code for file aims/registration/displacement_field.h...
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Generating code for file aims/registration/ffd.h...
Generating code for file aims/registration/minimisation.h...
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Generating code for file aims/registration/scale_control.h...
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Generating code for file aims/resampling/bucketmapsampler.h...
Generating code for file aims/resampling/cubicresampler.h...
Generating code for file aims/resampling/cubicresampler_d.h...
Generating code for file aims/resampling/extremadifferencesubsampling.h...
Generating code for file aims/resampling/generalsampler.h...
Generating code for file aims/resampling/harmonicCageResampler.h...
Generating code for file aims/resampling/linearresampler.h...
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Generaanatomist/processor/Writer.h...
Generating code for file anatomist/qtvr3/creator.h...
Generating code for file anatomist/qtvr3/cubeZbuffer.h...
Generating code for file anatomist/qtvr3/mipShader.h...
Generating code for file anatomist/qtvr3/mpvrShader.h...
Generating code for file anatomist/qtvr3/rfmtShader.h...
Generating code for file anatomist/qtvr3/shader.h...
Generating code for file anatomist/qtvr3/shaderFactory.h...
Generating code for file anatomist/qtvr3/slicing.h...
Generating code for file anatomist/qtvr3/sumShader.h...
Generating code for file anatomist/qtvr3/vector3d.h...
Generating code for file anatomist/qtvr3/vrShader.h...
Generating code for file anatomist/qtvr3/vrsingleton.h...
Generating code for file anatomist/reference/Geometry.h...
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Generating code for file anatomist/reference/wReferential_3d.h...
Generating code for file anatomist/selection/postSelector.h...
Generating code for file anatomist/selection/qSelectFactory.h...
Generating code for file anatomist/selection/qSelectWid.h...
Generating code for file anatomist/selection/qSelMenu.h...
Generating code for file anatomist/selection/qwSelAttrib.h...
Generating code for file anatomist/selection/selectFactory.h...
Generating code for file anatomist/selection/selector.h...
Generating code for file anatomist/selection/wSelChooser.h...
Generating code for file anatomist/sparsematrix/connectivitymatrix.h...
Generating code for file anatomist/sparsematrix/sparsematrix.h...
Generating code for file anatomist/stdmod/stdmod.h...
Generating code for file anatomist/surface/cutmesh.h...
Generating code for file anatomist/surface/fusion2Dmesh.h...
Generating code for file anatomist/surface/fusiontexsurf.h...
Generating code for file anatomist/surface/glcomponent.h...
Generating code for file anatomist/surface/glcomponent_internals.h...
Generating code for file anatomist/surface/globject.h...
Generating code for file anatomist/surface/mtexture.h...
Generating code for file anatomist/surface/planarfusion3d.h...
Generating code for file anatomist/surface/Shader.h...
Generating code for file anatomist/surface/shownormals.h...
Generating code for file anatomist/surface/shownormalsgui.h...
Generating code for file anatomist/surface/surface.h...
Generating code for file anatomist/surface/surface_d.h...
Generating code for file anatomist/surface/tesselatedmesh.h...
Generating code for file anatomist/surface/texsurface.h...
Generating code for file anatomist/surface/textobject.h...
Generating code for file anatomist/surface/texture.h...
Generating code for file anatomist/surface/transformedobject.h...
Generating code for file anatomist/surface/triangulated.h...
Generating code for file anatomist/surface/vectorfield.h...
Generating code for file anatomist/surface/wvectorfield.h...
Generating code for file anatomist/surfmatcher/surfMatcher.h...
Generating code for file anatomist/surfmatcher/surfMatchMethod.h...
Generating code for file anatomist/volume/slice.h...
Generating code for file anatomist/volume/Volume.h...
Generating code for file anatomist/volume/volumeview.h...
Generating code for file anatomist/window/colorstyle.h...
Generating code for file anatomist/window/controlledWindow.h...
Generating code for file anatomist/window/glcaps.h...
Generating code for file anatomist/window/glcontext.h...
Generating code for file anatomist/window/glwidget.h...
Generating code for file anatomist/window/glwidgetmanager.h...
Generating code for file anatomist/window/qwinblock.h...
Generating code for file anatomist/window/qwindow.h...
Generating code for file anatomist/window/qWindone
checking consistency... /casa/host/src/anatomist/anatomist-gpl/master/pyanatomist/doc/sphinx/pyanatomist_addons.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 50%] index
Factory.h...
Generating code for file anatomist/window/viewstate.h...
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ph/qgraphproperties.h...
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file anatomist/qtvr3/mpvrShader.h...
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/casa/host/build/include/anatomist/erpio/erpWraper.h:71: warning: The following parameter of ErpWraper::update(const anatomist::Observable *observable, void *arg) is not documented:
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/casa/host/build/include/anatomist/window3D/wFixedPointOfView.h:57: warning: The following parameter of FixedPointOfViewWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
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/casa/host/build/include/anatomist/mobject/wFusion2D.h:56: warning: The following parameter of Fusion2DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
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/casa/host/build/include/anatomist/mobject/wFusion3D.h:57: warning: The following parameter of Fusion3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
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/casa/host/build/include/anatomist/landmark/graphLandmark.h:74: warning: The following parameter of GraphLandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
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/casa/host/build/include/anatomist/window3D/wLightModel.h:57: warning: The following parameter of LightModelWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
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/casa/host/build/include/anatomist/action/paintaction.h:78: warning: The following parameter of PaintActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
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Path.h...
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:08,592::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
dow3D/agraphicsview_p.h...
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Generating docs for file aims/signalfilter/filteringfunction_element_d.h...
Generating docs for file aims/signalfilter/filteringfunction_element_rgb.h...
Generating docs for file aims/signalfilter/filteringfunction_element_rgb_d.h...
Generating docs for file aims/signalfilter/filteringfunction_linear.h...
Generating docs for file aims/signalfilter/filteringfunction_linear_d.h...
Generating docs for fi/casa/host/build/include/anatomist/selection/qSelectFactory.h:70: warning: The following parameters of QSelectFactory::handleSelectionMenu(anatomist::AWindow *win, int x, int y, const Tree *specific=0) are not documented:
  parameter 'win'
  parameter 'x'
  parameter 'y'
/casa/host/build/include/anatomist/interface/qwSurfMatch.h:60: warning: The following parameter of QSurfMatchWin::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/texturepanel.h:75: warning: The following parameter of QTexturePanel::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/texturewin.h:62: warning: The following parameter of QTextureWin::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
le aims/signalfilter/filteringfunction_linear_rgb.h...
Generating docs for file aims/signalfilter/filteringfunction_linear_rgb_d.h...
Generating docs for file aims/signalfilter/filteringimagealgorithm.h...
Generating docs for file aims/signalfilter/firfilter.h...
Generating docs for file aims/signalfilter/g2dsmooth.h...
Generating docs for file aims/signalfilter/g3dsmooth.h...
Generating docs for file aims/signalfilter/gaborfilter.h...
Generating docs for file aims/signalfilter/gcoef.h...
Generating docs for file aims/signalfilter/gcolumns.h...
Generating docs for file aims/signalfilter/gframes.h...
Generating docs for file aims/signalfilter/ggradient.h...
Generating docs for file aims/signalfilter/ghessian.h...
Generating docs for file aims/signalfilter/gjacobian.h...
Generating docs for file aims/signalfilter/glines.h...
Generating docs for file aims/signalfilter/grecurse.h...
Generating docs for file aims/signalfilter/gslices.h...
Generating docs for file aims/signalfilter/iirfilter.h...
Generating docs for file aims/signalfilter/linearfilterfactory.h...
Generating docs for file aims/signalfilter/linearfilterfactory_d.h...
Generating docs for file aims/signalfilter/majorityfilter.h...
Generating docs for file aims/signalfilter/maxfilter.h...
Generating docs for file aims/signalfilter/meanfilter.h...
Generating docs for file aims/signalfilter/medianfilter.h...
Generating docs for file aims/signalfilter/minfilter.h...
Generating docs for file aims/signalfilter/movingaveragefilter.h...
Generating docs for file aims/signalfilter/parity.h...
Generating docs for file aims/signalfilter/sdfilter.h...
Generating docs for file aims/signalfilter/signalfilter_g.h...
Generating docs for file aims/signalfilter/splinefilter.h...
Generating docs for file aims/signalfilter/splinefilter_d.h...
Generating docs for file aims/signalfilter/sumfilter.h...
Generating docs for file aims/signalfilter/variancefilter.h...
Generating docs for file aims/signalfilter/vfilter.h...
Generating docs for file aims/spam/spam.h...
Generating docs for file aims/talairach/cramer.h...
Generating docs for file aims/talairach/talACPCNorm.h...
Generating docs for file aims/talairach/talairach.h...
Generating docs for file aims/talairach/talBoundingBoxPoints.h...
Generating docs for file aims/talairach/talBox.h...
Generating docs for file aims/talairach/talBoxBase.h...
Generating docs for file aims/talairach/talPoints.h...
Generating docs for file aims/talairach/talVolume.h...
Generating docs for file aims/threshold/emthreshold.h...
Generating docs for file aims/topology/adjacency.h...
Generating docs for file aims/topology/cc18adjacent.h...
Generating docs for file aims/topology/cc26adjacent.h...
Generating docs for file aims/topology/cc6adjacent.h...
Generating docs for file aims/topology/classifMeaning.h...
Generating docs for file aims/topology/components.h...
Generating docs for file aims/topology/components18.h...
Generating docs for file aims/topology/components26.h...
Generating docs for file aims/topology/connectivity18.h...
Generating docs for file aims/topology/connectivity26.h...
Generating docs for file aims/topology/connectivity6.h...
Generating docs for file aims/topology/relation.h...
Generating docs for file aims/topology/topoBase.h...
Generating docs for file aims/topology/topoClassif.h...
Generating docs for file aims/topology/topoClassifBase.h...
Generating docs for file aims/topology/topoClassifier.h...
Generating docs for file aims/topology/topology.h...
Generating docs for file aims/transform/fft1d.h...
Generating docs for file aims/transform/hilbert1d.h...
Generating docs for file aims/transform/least_square_estimation.h...
Generating docs for file aims/transform/rigidestimation.h...
Generating docs for file aims/transform/transform_objects.h...
Generating docs for file aims/transform/transform_objects_d.h...
Generating docs for file aims/utility/dynamic.h...
Generating docs for file aims/utility/dynamic_d.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound/casa/host/build/include/anatomist/color/wRendering.h:67: warning: The following parameter of RenderingWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:227: warning: The following parameter of RoiDynSegmentActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/histoplot.h:55: warning: The following parameter of RoiHistoPlot::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/levelsetaction.h:187: warning: The following parameter of RoiLevelSetActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:98: warning: The following parameter of RoiManagementActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/morphomath.h:113: warning: The following parameter of RoiMorphoMathActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/gradientwidget/spline.h:62: warning: argument 'ptSize' of command @param is not found in the argument list of Spline::findSegment(QSize gradSize, QPoint ptPos, int &amp;p1, int &amp;p2) const
/casa/host/build/include/anatomist/window3D/wTools3D.h:54: warning: The following parameter of Tools3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/surface/wvectorfield.h:62: warning: The following parameter of VectorFieldEditionWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/volrenderpanel.h:68: warning: The following parameter of VolRenderPanel::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:67: warning: The following parameter of anatomist::MiniPaletteGraphics::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:248: warning: The following parameter of anatomist::MiniPaletteWidgetEdit::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/color/minipalette.h:283: warning: Unsupported xml/html tag &lt;tab&gt; found
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
 Adjacency...
Generating docs for compound AimsConvolution...
Generating docs for compound AimsDistmapMask...
Generating docs for compound AimsDistmapMaskPoint...
Generating docs for compound AimsEigen...
Generating docs for compound AimsEMThreshold...
Generating docs for compound AimsFIRFilter...
Generating docs for compound AimsGradient...
Generating docs for compound AimsMaskedConvolution...
Generating docs for compound AimsPCA...
Generating docs for compound AimsSVD...
Generating docs for compound AimsVFilter...
Generating docs for compound BackBalancing...
Generating docs for compound Balancing...
Generating docs for compound BlockMatching...
Generating docs for compound BucketSampler...
Generating docs for compound CC18Adjacent...
Generating docs for compound CC26Adjacent...
Generating docs for compound CC6Adjacent...
Generating docs for compound ChamferMask...
Generating docs for compound Components...
Generating docs for compound Components18Neighborhood...
Generating docs for compound Components26Neighborhood...
Generating docs for compound Connectivity18...
Generating docs for compound Connectivity26...
Generating docs for compound Connectivity6...
Generating docs for compound CovarianceStorage...
Generating docs for compound CramerSolver...
Generating docs for compound CumulatedHistogram...
Generating docs for compound DecompositionTQLI...
Generating docs for compound DetermOptimizer...
Generating docs for compound DisplacementField...
Generating docs for compound Equalizer...
Generating docs for compound ExponentialDeviates...
Generating docs for compound Facet...
Generating docs for compound Gaussian2DSmoothing...
Generating docs for compound Gaussian3DSmoothing...
Generating docs for compound GaussianColumns...
Generating docs for compound GaussianFrames...
Generating docs for compound GaussianGradient...
Generating docs for compound GaussianHessian...
Generating docs for compound GaussianJacobian...
Generating docs for compound GaussianLines...
Generating docs for compound GaussianSlices...
Generating docs for compound GaussJordan...
Generating docs for compound GCoef...
Generating docs for compound GeometricMoment...
Generating docs for compound GMLFunc...
Generating docs for compound HessenbergAccumulation...
Generating docs for compound HessenbergQR...
Generating docs for compound HessenbergReduction...
Generating docs for compound Histogram...
Generating docs for compound HouseholderTridiag...
Generating docs for compound HuffStat...
Generating docs for compound HuffStatTmpStruct...
Generating docs for compound LevenbergMarquardt...
Generating docs for compound LM2Gaussian...
Generating docs for compound LMFunction...
Generating docs for compound LMGamma...
Generating docs for compound LMGaussian...
Generating docs for compound LMSEstimator...
Generating docs for compound LZBuffer...
Generating docs for compound LZHLCompressor...
Generating docs for compound LZHLDecoderStat...
Generating docs for nested compound LZHLDecoderStat::Group...
Generating docs for compound LZHLDecompressor...
Generating docs for compound LZHLEncoder...
Generating docs for compound LZHLEncoderStat...
Generating docs for nested compound LZHLEncoderStat::Symbol...
Generating docs for compound MaxPyramidFunc...
Generating docs for compound MeanPyramidFunc...
Generating docs for compound MedFunc...
Generating docs for compound MedianPyramidFunc...
Generating docs for compound MedianSmoothing...
Generating docs for compound Mesher...
Generating docs for compound MEstimator...
Generating docs for compound MEstimatorFunc...
Generating docs for compound Minimisation...
Generating docs for compound Moment...
Generating docs for compound MomentBase...
Generating docs for compound MomentFactory...
Generating docs for compound MomentIncrementalStrategy...
Generating docs for compound MomentInvariant...
Generating docs for compound MomentNormalStrategy...
Generating docs for compound MomentStrategy...
Generating docs for compound MomentSurfacicStrategy...
Generating docs for compound MomentTriangleFactory...
Generating docs for compound Mo/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
iewToolTip...
Generating docs for compound QAWindow...
Generating docs for compound QAWindowBlock...
Generating docs for compound QAWindowFactory...
Generating docs for nested compound QAWindowFactory::Descrip...
Generating docs for nested compound QAWindowFactory::PixList...
Generating docs for compound QCancelLineEdit...
Generating docs for compound QClickGraphicsView...
Generating docs for compound QGraphParam...
Generating docs for compound QGraphProperties...
Generating docs for compound QImageLabel...
Generating docs for compound QLabelEdit...
Generating docs for compound QObjectBrowser...
Generating docs for compound QObjectBrowserWidget...
Generating docs for nested compound QObjectBrowserWidget::ItemDescr...
Generating docs for compound QObjectTree...
Generating docs for compound QScopeLineEdit...
Generating docs for compound QSelAttrib...
Generating docs for compound QSelectFactory...
Generating docs for compound QSelectMenu...
Generating docs for compound QStringEdit...
Generating docs for compound QSurfMatchWin...
Generating docs for compound QSurfMatchWin_AttEdit...
Generating docs for compound QTexturePanel...
Generating docs for compound QTextureParams...
Generating docs for compound QTextureVectorEditor...
Generating docs for compound QTextureWin...
Generating docs for compound QVectorCompEditor...
Generating docs for compound QWindowTree...
Generating docs for compound ReferentialWindow...
Generating docs for compound ReferentialWindow_TransCallback...
Generating docs for compound RegionsFusionWindow...
Generating docs for compound RenderingWindow...
Generating docs for compound RoiDynSegmentActionView...
Generating docs for compound RoiHistoPlot...
Generating docs for compound RoiLevelSetActionView...
Generating docs for compound RoiManagementActionView...
Generating docs for compound RoiMorphoMathActionView...
Generating docs for compound Spline...
Generating docs for compound ToolBox...
Generating docs for compound Tools3DWindow...
Generating docs for compound VectorFieldEditionWindow...
Generating docs for compound VolRenderPanel...
Generating docs for compound ZoomDialog...
Generating namespace index...
Generating docs for namespace aims
Generating docs for namespace anatomist
Generating docs for compound anatomist::AnatomistInfo...
Generating docs for compound anatomist::Anatomist...
Generating docs for compound anatomist::GlobalConfiguration...
Generating docs for compound anatomist::LocalConfiguration...
Generating docs for compound anatomist::Settings...
Generating docs for compound anatomist::Module...
Generating docs for compound anatomist::ModuleManager...
Generating docs for compound anatomist::ModuleObserver...
Generating docs for compound anatomist::ModuleInterface...
Generating docs for compound anatomist::SyntaxRepository...
Generating docs for compound anatomist::SelectBrowserControl...
Generating docs for compound anatomist::AttDescr...
Generating docs for compound anatomist::Bucket...
Generating docs for compound anatomist::ColorScalarPaletteTraits...
Generating docs for compound anatomist::ColorNoPaletteTraits...
Generating docs for compound anatomist::ColorTraits...
Generating docs for compound anatomist::MiniPaletteGraphics...
Generating docs for compound anatomist::MiniPaletteWidget...
Generating docs for compound anatomist::MiniPaletteWidgetEdit...
Generating docs for compound anatomist::MiniPaletteWidgetTranscient...
Generating docs for compound anatomist::APaletteExtensionAction...
Generating docs for compound anatomist::AObjectPalette...
Generating docs for compound anatomist::APalette...
Generating docs for compound anatomist::PaletteList...
Generating docs for compound anatomist::PaletteSelectWidget...
Generating docs for compound anatomist::Material...
Generating docs for compound anatomist::Light...
Generating docs for compound anatomist::APaletteWin...
Generating docs for compound anatomist::APaletteWinFactory...
Generating docs for compound anatomist::ActivateActionCommand...
Generating docs for compound anatomist::AddObjectCommand...
Generating docs for compound anatomi/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cAssignReferential.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set&lt; AObject * &gt; &amp;obj, const std::set&lt; AWindow * &gt; &amp;win, int refId=-1, CommandContext *context=0, const std::string &amp;filename="", const std::string &amp;uuid="")
/casa/host/build/include/anatomist/commands/cAssignReferential.h:66: warning: The following parameters of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set&lt; AObject * &gt; &amp;obj, const std::set&lt; AWindow * &gt; &amp;win, int refId=-1, CommandContext *context=0, const std::string &amp;filename="", const std::string &amp;uuid="") are not documented:
  parameter 'context'
  parameter 'filename'
  parameter 'uuid'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/aims/mesh/meshwatershed.h:73: warning: The following parameters of aims::meshBlobsBifurcation(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; double &gt; &amp;height, std::vector&lt; int &gt; &amp;father, std::vector&lt; int &gt; &amp;label, double th) are not documented:
  parameter 'mesh'
  parameter 'field'
  parameter 'th'
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lidx' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'ldepth' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lmajor' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:56: warning: The following parameters of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold) are not documented:
  parameter 'mesh'
  parameter 'field'
  parameter 'idx'
  parameter 'depth'
  parameter 'major'
  parameter 'threshold'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
writing output... [100%] pyanatomist_addons
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:78: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithmInterface&lt; T &gt;::getOutputImageDimensions(const Point4dl &amp;dims) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:84: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageDimensions(const Point4dl &amp;dims) const is not documented:
  parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:89: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithmInterface&lt; T &gt;::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:95: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const is not documented:
  parameter 'voxelsize'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithm&lt; T &gt;::getOutputImageDimensions(const Point4dl &amp;dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: The following parameter of aims::ImageAlgorithm::getOutputImageDimensions(const Point4dl &amp;dims) const is not documented:
  parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithm&lt; T &gt;::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: The following parameter of aims::ImageAlgorithm::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const is not documented:
  parameter 'voxelsize'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:319: warning: The following parameter of aims::ImageAlgorithmSwitch&lt; T, false &gt;::execute(ImageAlgorithmInterface&lt; T &gt; &amp;algo, const carto::VolumeRef&lt; T &gt; &amp;in, carto::VolumeRef&lt; T &gt; &amp;out, int verbose=carto::verbose) is not documented:
  parameter 'verbose'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:350: warning: The following parameter of aims::ImageAlgorithmSwitch&lt; T, true &gt;::execute(ImageAlgorithmInterface&lt; ChannelType &gt; &amp;algo, const carto::VolumeRef&lt; T &gt; &amp;in, carto::VolumeRef&lt; T &gt; &amp;out, int verbose) is not documented:
  parameter 'verbose'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'

generating indices... /casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
genindex /casa/host/build/include/anatomist/control/controlMenuHandler.h:57: warning: The following parameter of anatomist::AControlMenuHandler::AControlMenuHandler(QMenuBar *menubar, QObject *receiver) is not documented:
  parameter 'menubar'
st::ApplyBuiltinReferentialCommand...
Generating docs for compound anatomist::AskTexExtremaCommand...
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writing additional pages... search for compound anatomist::UpdateControlWindowEvent...
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/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
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copying static files... /casa/host/build/include/anatomist/hierarchy/hierarchy.h:83: warning: The following parameter of anatomist::Hierarchy::findMatchingNomenclature(const AObject *obj, const AGraph **ag=0) is not documented:
  parameter 'obj'
/casa/host/build/include/anatomist/selection/selectFactory.h:134: warning: The following parameters of anatomist::SelectFactory::handleSelectionMenu(AWindow *win, int x, int y, const Tree *specific=0) are not documented:
  parameter 'win'
  parameter 'x'
  parameter 'y'
/casa/host/build/include/anatomist/observer/Observer.h:66: warning: The following parameter of anatomist::Observer::update(const Observable *observable, void *arg)=0 is not documented:
  parameter 'arg'
done
copying extra files... done
dumping search index in English (code: en)... /casa/host/build/include/anatomist/reference/refobserver.h:70: warning: The following parameter of anatomist::ReferentialObserver::update(const Observable *observable, void *arg) is not documented:
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done
dumping object inventory... bilisticPcaElement...
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Generating docs for compound aims::ScaleSpace&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::ScaleSpace&lt; AimsSurface&lt; D, Void &gt;, Texture&lt; T &gt; &gt;...
Generating docs for compound aims::ScaleLevel...
Generating docs for compound aims::ScaleLevel&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::ScaleLevel&lt; AimsSurface&lt; D, Void &gt;, Texture&lt; T &gt; &gt;...
Generating docs for compound aims::Smoother...
Generating docs for compound aims::Smoother&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
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Sphinx-Gallery successfully executed 0 out of 0 files subselected by:

    gallery_conf["filename_pattern"] = '/(anagraphannotate)|(aimsvolumetest)|(anaevensimplerviewer)|(control)|(ellipsoid)|(fusion3D)|(graph)|(graph_building)|(meshtest)|(nomenclatureselection)|(selection)|(volumetest)|(customopenglobject)\\.py'
    gallery_conf["ignore_pattern"]   = '__init__\\.py'

after excluding 13 files that had previously been run (based on MD5).

embedding documentation hyperlinks...
embedding documentation hyperlinks for auto_examples... [  4%] aimsvolumetest.html
embedding documentation hyperlinks for auto_examples... [  8%] selection.html
embedding documentation hyperlinks for auto_examples... [ 12%] graph.html
embedding documentation hyperlinks for auto_examples... [ 16%] fusion.html
embedding documentation hyperlinks for auto_examples... [ 20%] control.html
embedding documentation hyperlinks for auto_examples... [ 24%] texturedrawing.html
embedding documentation hyperlinks for auto_examples... [ 28%] meshtest.html
embedding documentation hyperlinks for auto_examples... [ 32%] graph_building.html
embedding documentation hyperlinks for auto_examples... [ 36%] ellipsoid.html
embedding documentation hyperlinks for auto_examples... [ 40%] activateaction.html
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embedding documentation hyperlinks for auto_examples... [ 52%] anagraphannotate.html
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embedding documentation hyperlinks for auto_examples... [ 88%] events.html
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embedding documentation hyperlinks for auto_examples... [100%] addMenuEntry.html

build succeeded, 27 warnings.

The HTML pages are in ../../../share/doc/pyanatomist-5.2/sphinx.
PyAnatomist Module present
PythonLauncher::runModules()
/casa/host/build/include/anatomist/surface/glcomponent.h:149: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:152: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:324: warning: The following parameters of anatomist::GLComponent::glBuildTexImage(const ViewState &amp;state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
  parameter 'state'
  parameter 'tex'
  parameter 'dimy'
/casa/host/build/include/anatomist/surface/planarfusion3d.h:103: warning: The following parameters of anatomist::PlanarFusion3D::glBuildTexImage(const ViewState &amp;state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
  parameter 'state'
  parameter 'tex'
  parameter 'dimy'
/casa/host/build/include/aims/resampling/resampler.h:228: warning: argument 'transform' of command @param is not found in the argument list of aims::Resampler&lt; T &gt;::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, carto::Volume&lt; T &gt; &amp;output_data, bool verbose=false) const
/casa/host/build/include/aims/resampling/resampler.h:247: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, carto::Volume&lt; T &gt; &amp;output_data, bool verbose=false) const is not documented:
  parameter 'inverse_transform_to_mm'
/casa/host/build/include/aims/resampling/resampler.h:205: warning: argument 'inverse_transform' of command @param is not found in the argument list of aims::Resampler&lt; T &gt;::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, const Point3df &amp;output_location, T &amp;output_value, int timestep) const
/casa/host/build/include/aims/resampling/resampler.h:221: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, const Point3df &amp;output_location, T &amp;output_value, int timestep) const is not documented:
  parameter 'inverse_transform_to_mm'
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:09,392::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/build/include/anatomist/surface/texture.h:91: warning: The following parameter of anatomist::ATexture::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/aims/scalespace/meshDiffuse.h:69: warning: The following parameters of aims::TextureSmoothing::surfaceBlockSmooth(const std::string &amp;latt_filename, const std::string *val_filename, const std::string &amp;path_name, unsigned nscans, float dt, unsigned iter, unsigned scans_block, unsigned nodes_block, unsigned nnodes, unsigned ncolPINV, const std::string *outfiles, const float HMAX, const float Umax) are not documented:
  parameter 'HMAX'
  parameter 'Umax'
/casa/host/build/include/anatomist/surface/shownormalsgui.h:72: warning: The following parameter of anatomist::NormalsSettingsPanel::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/surface/shownormalsgui.h:62: warning: The following parameter of anatomist::NormalsSettingsPanel::NormalsObserver::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/aims/signalfilter/filteringfunction_element.h:74: warning: The following parameter of aims::ElementFilteringFunction::execute(const carto::VolumeRef&lt; T &gt; &amp;in, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const=0 is not documented:
  parameter 'se'
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:09,557::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
lder...
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Generating/casa/host/build/include/anatomist/object/oReader.h:86: warning: The following parameter of anatomist::ObjectReader::registerLoader(const std::string &amp;extension, LoadFunctionClass *newFunc) is not documented:
  parameter 'extension'
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Generating docs for compound anatomist::AGraphObject...
Generating docs for compound anatomist::AGraph...
Generating docs for compound anatomist::ObjectActions...
Generating docs for compound anatomist::ClippedObject...
Generating docs for compound anatomist::AObjectLoadEvent...
Generating docs for compound anatomist::ObjectReaderNotifier...
Generating docs for compound anatomist::MObjectIO...
Generating docs for compound anatomist::ObjectMenuCallback...
Generating docs for compound anatomist::ObjectMenuCallbackFunc...
Generating docs for compound anatomist::ObjectMenu...
Generating docs for compound anatomist::ObjectMenuRegistrerClass...
Generating docs for compound anatomist::ObjectMenuRegistrerFuncClass...
Generating docs for compound anatomist::ObjectUtils...
Generating docs for compound anatomist::OptionMatcher...
Generating docs for compound anatomist::ObjectReader...
Generating docs for nested compound anat/casa/host/build/include/anatomist/object/Object.h:415: warning: Unsupported xml/html tag &lt;T&gt; found
/casa/host/build/include/anatomist/object/Object.h:449: warning: The following parameter of anatomist::AObject::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/sliceable.h:80: warning: The following parameters of anatomist::Sliceable::glBuildTexImage(const ViewState &amp;state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
  parameter 'state'
  parameter 'tex'
  parameter 'dimy'
/casa/host/build/include/aims/distancemap/meshdistance.h:86: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface&lt; 3, Void &gt; &amp;mesh, MapType &amp;distmaps, const Texture&lt; T &gt; &amp;inittex, float max_dist=FLT_MAX) is not documented:
  parameter 'mesh'
/casa/host/build/include/aims/distancemap/meshdistance.h:99: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface&lt; 3, Void &gt; &amp;mesh, MapType &amp;distmaps, float max_dist=FLT_MAX) is not documented:
  parameter 'mesh'
/casa/host/build/include/aims/mesh/mesh_graph.h:122: warning: The following parameters of aims::meshgraph::List2GraphMeshConvertor::operator()(TVertexCollection const &amp;vertices, TFaceCollection const &amp;faceIndices, std::vector&lt; std::list&lt; std::size_t &gt; &gt; const &amp;invertedFaceIndices, TNeighborCollection const &amp;neighbors, std::list&lt; TVertexNode &gt; &amp;graph_vertices, std::list&lt; TFaceNode &gt; &amp;graph_faces) are not documented:
  parameter 'graph_vertices'
  parameter 'graph_faces'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm&lt; T &gt;::getOutputImageDimensions(const Point4dl &amp;dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageDimensions(const Point4dl &amp;dims) const is not documented:
  parameter 'dims'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: argument 'Point4df' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm&lt; T &gt;::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const is not documented:
  parameter 'voxelsize'
/casa/host/build/include/anatomist/window/Window.h:224: warning: The following parameter of anatomist::AWindow::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
 docs for compound aims::NotNullMeanFilter...
Generating docs for compound aims::MinFilter...
Generating docs for compound aims::MaxFilter...
Generating docs for compound aims::MajorityFilter...
Generating docs for compound aims::NotNullMajorityFilter...
Generating docs for compound aims::MovingAverageKernel...
Generating docs for compound aims::MovingAverageCascadeKernel...
Generating docs for compound aims::MovingAverageFilter...
Generating docs for compound aims::MovingAverageCascadeFilter...
Generating docs for compound aims::SumFilter...
Generating docs for compound aims::VarFilter...
Generating docs for compound aims::StDevFilter...
Generating docs for compound aims::IIRFilterBase...
Generating docs for compound aims::CausalSinglePoleIIRFilter...
Generating docs for compound aims::SymAllPoleIIRFilter...
Generating docs for compound aims::InverseBSplineFilter...
Generating docs for compound aims::DirectBSplineFilter...
Generating docs for compound aims::FilterType...
Generating docs for compound aims::SpamBase...
Generating docs for compound aims::SpamFromLikelihood...
Generating docs for compound aims::Spam...
Generating docs for compound aims::TransformLeastSquareEstimation...
Generating docs for compound aims::AffineLeastSquareEstimation...
Generating docs for compound aims::RigidLeastSquareEstimation...
Generating docs for compound aims::TranslationLeastSquareEstimation...
Generating docs for compound aims::SimiLeastSquareEstimation...
Generating docs for compound aims::RigidTransformEstimation...
Generating docs for compound aims::BundleTransformer...
Generating docs for namespace aims::convolutionfilter
Generating docs for namespace aims::convolutionsubsampler
Generating docs for namespace aims::internal
Generating docs for namespace aims::internal::fastmarching
Generating docs for compound aims::internal::fastmarching::StorageTrait...
Generating docs for compound aims::internal::fastmarching::StorageTrait&lt; carto::Volume&lt; T &gt; &gt;...
Generating docs for compound aims::internal::fastmarching::StorageTrait&lt; BucketMap&lt; T &gt; &gt;...
Generating docs for namespace aims::knn
Generating docs for compound aims::knn::Distance...
Generating docs for compound aims::knn::EuclidianDistance...
Generating docs for compound aims::knn::SquaredEuclidianDistance...
Generating docs for compound aims::knn::ManhattanDistance...
Generating docs for compound aims::knn::TchebychevDistance...
Generating docs for compound aims::knn::Database...
Generating docs for nested compound aims::knn::Database::DatabaseCompare...
Generating docs for nested compound aims::knn::Database::iterator...
Generating docs for nested compound aims::knn::Database::Vector...
Generating docs for compound aims::knn::MultiDatabase...
Generating docs for compound aims::knn::Heap...
Generating docs for nested compound aims::knn::Heap::MiniHeap...
Generating docs for compound aims::knn::Knn...
Generating docs for compound aims::knn::KnnBruteForce...
Generating docs for compound aims::knn::KnnFriedman...
Generating docs for compound aims::knn::KnnGlobalFriedman...
Generating docs for namespace aims::meshdistance
Generating docs for compound aims::meshdistance::DistMapMatrixTraits...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits&lt; std::map&lt; T, U &gt; &gt;...
Generating docs for namespace aims::meshgraph
Generating docs for compound aims::meshgraph::MeshFaceNode...
Generating docs for compound aims::meshgraph::MeshVertexNode...
Generating docs for compound aims::meshgraph::List2GraphMeshConvertor...
Generating docs for compound aims::meshgraph::Graph2ListMeshConvertor...
Generating docs for namespace aims::singlechannel
Generating docs for compound aims::singlechannel::SubSamplingImageAlgorithm...
Generating docs for compound aims::singlechannel::LinearFilteringImageAlgorithm...
Generating docs for compound aims::singlechannel::ElementFilteringImageAlgorithm...
Generating docs for namespace aims::strel
Generating docs for namespace aims::util
Generating docs for namespa/casa/host/build/include/aims/resampling/bucketmapsampler.h:67: warning: argument 'object' of command @param is not found in the argument list of aimsalgo::BucketMapSampler&lt; T, D &gt;::sample(Samplable&lt; T, D &gt; *data, unsigned dimensionIndex, AimsVector&lt; short, D &gt; &amp;partialCoords, aims::BucketMap&lt; Void &gt; &amp;result)
/casa/host/build/include/aims/resampling/bucketmapsampler.h:73: warning: The following parameter of aimsalgo::BucketMapSampler::sample(Samplable&lt; T, D &gt; *data, unsigned dimensionIndex, AimsVector&lt; short, D &gt; &amp;partialCoords, aims::BucketMap&lt; Void &gt; &amp;result) is not documented:
  parameter 'data'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
Process2 execution, a: 0.000000, b: blop
/casa/host/build/include/anatomist/object/Object.h:415: warning: Unsupported xml/html tag &lt;T&gt; found
omist::ObjectReader::LoadFunctionClass...
Generating docs for compound anatomist::AImage...
Generating docs for compound anatomist::AObject...
Generating docs for compound anatomist::ObjectConverter...
Generating docs for compound anatomist::SelfSliceable...
Generating docs for compound anatomist::Sliceable...
Generating docs for compound anatomist::SliceableObject...
Generating docs for compound anatomist::GLCaps...
Generating docs for compound anatomist::GLWidgetManager...
Generating docs for compound anatomist::BlockBorderWidget...
Generating docs for compound anatomist::DraggableWrapper...
Generating docs for compound anatomist::ViewState...
Generating docs for compound anatomist::SliceViewState...
Generating docs for compound anatomist::AWindowCreator...
Generating docs for compound anatomist::AWindowFactory...
Generating docs for compound anatomist::AWindowCreatorFunc...
Generating docs for compound anatomist::AWindow...
Generating docs for compound anatomist::AnnotationAction...
Generating docs for compound anatomist::BoxViewSlice...
Generating docs for compound anatomist::ConnectivityMatrixAction...
Generating docs for compound anatomist::ConnectivityMatrixControl...
Generating docs for compound anatomist::OrientationAnnotation...
Generating docs for compound anatomist::Cursor...
Generating docs for compound anatomist::Control3D...
Generating docs for compound anatomist::Select3DControl...
Generating docs for compound anatomist::FlightControl...
Generating docs for compound anatomist::ObliqueControl...
Generating docs for compound anatomist::TransformControl...
Generating docs for compound anatomist::CutControl...
Generating docs for compound anatomist::WindowActions...
Generating docs for compound anatomist::LinkAction...
Generating docs for compound anatomist::MenuAction...
Generating docs for compound anatomist::SelectAction...
Generating docs for compound anatomist::Zoom3DAction...
Generating docs for compound anatomist::Translate3DAction...
Generating docs for compound anatomist::Sync3DAction...
Generating docs for compound anatomist::MovieAction...
Generating docs for compound anatomist::SliceAction...
Generating docs for compound anatomist::DragObjectAction...
Generating docs for compound anatomist::SortMeshesPolygonsAction...
Generating docs for compound anatomist::ObjectStatAction...
Generating docs for compound anatomist::LabelEditAction...
Generating docs for compound anatomist::Trackball...
Generating docs for compound anatomist::ContinuousTrackball...
Generating docs for compound anatomist::KeyFlightAction...
Generating docs for compound anatomist::TrackCutAction...
Generating docs for compound anatomist::CutSliceAction...
Generating docs for compound anatomist::TrackOblique...
Generating docs for compound anatomist::TrackObliqueSlice...
Generating docs for compound anatomist::Transformer...
Generating docs for compound anatomist::TranslaterAction...
Generating docs for compound anatomist::PlanarTransformer...
Generating docs for compound anatomist::ResizerAction...
Generating docs for compound anatomist::GLObjectList...
Generating docs for compound anatomist::GLObjectVector...
Generating docs for compound anatomist::GLMObject...
Generating docs for compound anatomist::ObjectVectorIterator...
Generating docs for compound anatomist::const_ObjectVectorIterator...
Generating docs for compound anatomist::ObjectVector...
Generating docs for compound anatomist::BaseIterator...
Generating docs for compound anatomist::AIterator...
Generating docs for compound anatomist::MObject...
Generating docs for compound anatomist::Fusion2D...
Generating docs for compound anatomist::Fusion3D...
Generating docs for compound anatomist::ObjectListIterator...
Generating docs for compound anatomist::const_ObjectListIterator...
Generating docs for compound anatomist::ObjectList...
Generating docs for compound anatomist::Slice...
Generating docs for compound anatomist::AVolumeBase...
Generating docs for compound anatomist::AVolume...
Generating docs for compound anatomist::AVolumeView...
Generating docs for compound anatomist:/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
warning: Inheritance graph for 'anatomist::RegularCommand' not generated, too many nodes (57), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:60: warning: Found unknown command '\URL'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:85: warning: The following parameters of anatomist::Registry::add(const std::string &amp;command, Command::Reader function, const carto::SyntaxSet &amp;syntax) are not documented:
  parameter 'function'
  parameter 'syntax'
/casa/host/build/include/anatomist/processor/Reader.h:64: warning: The following parameter of anatomist::CommandReader::CommandReader(const std::string &amp;filename, carto::MutexRcPtr&lt; CommandContext &gt; &amp;context) is not documented:
  parameter 'context'
/casa/host/build/include/anatomist/constrainteditor/wConstraintEditor.h:61: warning: The following parameter of anatomist::ConstraintEditorWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
[ 95%] Built target aims-free-sphinx
/casa/host/build/include/anatomist/action/levelsetaction.h:64: warning: The following parameter of anatomist::RoiLevelSetActionSharedData::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
:CommandContext...
Generating docs for compound anatomist::ErrorMessage...
Generating docs for compound anatomist::OutputEvent...
Generating docs for compound anatomist::OutputEventFilter...
Generating docs for compound anatomist::EventHandler...
Generating docs for compound anatomist::APipeReader...
Generating docs for compound anatomist::Unserializer...
Generating docs for compound anatomist::CommandServer...
Generating docs for compound anatomist::Command...
Generating docs for compound anatomist::RegularCommand...
Generating docs for compound anatomist::SerializingCommand...
Generating docs for compound anatomist::WaitCommand...
Generating docs for compound anatomist::Processor...
Generating docs for nested compound anatomist::Processor::Memo...
Generating docs for compound anatomist::Registry...
Generating docs for compound anatomist::CommandReader...
Generating docs for compound anatomist::CommandWriter...
Generating docs for compound anatomist::Serializer...
Generating docs for compound anatomist::Fusion2dMethod...
Generating docs for compound anatomist::Fusion3dMethod...
Generating docs for compound anatomist::PlanarFusion3dMethod...
Generating docs for compound anatomist::FusionTextureMethod...
Generating docs for compound anatomist::FusionMultiTextureMethod...
Generating docs for compound anatomist::FusionCutMeshMethod...
Generating docs for compound anatomist::Fusion2DMeshMethod...
Generating docs for compound anatomist::FusionSliceMethod...
Generating docs for compound anatomist::FusionRGBAVolumeMethod...
Generating docs for compound anatomist::FusionClipMethod...
Generating docs for compound anatomist::FusionTesselationMethod...
Generating docs for compound anatomist::ConnectivityMatrixFusionMethod...
Generating docs for compound anatomist::VectorFieldFusionMethod...
Generating docs for compound anatomist::FusionMethod...
Generating docs for compound anatomist::FusionFactory...
Generating docs for compound anatomist::StdModule...
Generating docs for compound anatomist::AConnectivityMatrix...
Generating docs for compound anatomist::ASparseMatrix...
Generating docs for compound anatomist::GLItem...
Generating docs for compound anatomist::Primitive...
Generating docs for compound anatomist::GLList...
Generating docs for compound anatomist::GLTexture...
Generating docs for compound anatomist::GLItemList...
Generating docs for compound anatomist::GLNoExecItemList...
Generating docs for compound anatomist::ConstraintEditorWindow...
Generating docs for compound anatomist::NodeSelectionAction...
Generating docs for compound anatomist::NodeSelectionControl...
Generating docs for compound anatomist::HierarchyEditor...
Generating docs for compound anatomist::ErpReader...
Generating docs for compound anatomist::AInterpolerMethod...
Generating docs for compound anatomist::AInterpoler...
Generating docs for compound anatomist::ALandmarkFactory...
Generating docs for compound anatomist::PlaneFusionMethod...
Generating docs for compound anatomist::CylinderFusionMethod...
Generating docs for compound anatomist::ASurfMatchMethod...
Generating docs for compound anatomist::ASurfMatcher...
Generating docs for compound anatomist::AnaSurfMatch...
Generating docs for compound anatomist::SurfpaintModule...
Generating docs for compound anatomist::SurfpaintTools...
Generating docs for compound anatomist::SurfpaintToolsAction...
Generating docs for compound anatomist::SurfpaintToolsControl...
Generating docs for compound anatomist::VolRenderFusionMethod...
Generating docs for compound anatomist::VolRenderShaderFusionMethod...
Generating docs for compound anatomist::VolRenderModule...
Generating docs for compound anatomist::VolRender...
Generating docs for compound anatomist::VolRenderShader...
Generating docs for compound anatomist::ProfileModule...
Generating docs for compound anatomist::RoiLevelSetActionSharedData...
Generating docs for compound anatomist::RoiLevelSetAction...
Generating docs for compound anatomist::RoiLabelNamingAction...
Generating docs for compound anatomist::ChangesItem...
Generating docs for compound anatomist::/casa/host/build/include/anatomist/action/paintaction.h:124: warning: The following parameters of anatomist::PaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm)=0 are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:177: warning: The following parameters of anatomist::PointPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:200: warning: The following parameters of anatomist::SquarePaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:224: warning: The following parameters of anatomist::DiskPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:259: warning: The following parameters of anatomist::BallPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:296: warning: The following parameter of anatomist::PaintActionSharedData::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:203: warning: The following parameter of anatomist::RoiManagementActionSharedData::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'ref' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'obj' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'refId' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'unser' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:68: warning: The following parameters of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0) are not documented:
  parameter 'image'
  parameter 'requestid'
  parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'ref' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'obj' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'refId' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:66: warning: The following parameters of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0) are not documented:
  parameter 'image'
  parameter 'assignLowThreshold'
  parameter 'lowThres'
  parameter 'assignHighThreshold'
  parameter 'highThres'
  parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:65: warning: The following parameter of anatomist::RoiDynSegmentAction::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
ce aimsalgo
Generating docs for compound aimsalgo::BucketMapSampler...
Generating docs for compound aimsalgo::GeneralSampler...
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Generating docs for compound aimsalgo::Polynomial...
Generating docs for namespace carto
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Generating docs for compound geodesic::GeodesicAlgorithmBase...
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Generating docs for namespace soma
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Generating dependency graph for directory aims
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Generating dependency graph for directory aims/estimation
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Generating dependency graph for directory aims/geodesicpath
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Generating dependency graph for directory aims/interpolation
Generating dependency graph for directory aims/io
Generating dependency graph for directory aims/math
Generating dependency graph for directory aims/mesh
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Generating dependency graph for directory aims/morphology
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Generating dependency graph for directory aims/pyramid
Generating dependency graph for directory aims/registration
Generating dependency graph for directory aims/resampling
Generating dependency graph for directory aims/roi
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Generating dependency graph for directory aims/signalfilter
Generating dependency graph for directory aims/threshold
Generating dependency graph for directory aims/transform
Generating index page...
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finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 14734/65536 hits=131938 misses=17807
finished...
[ 95%] Built target aimsalgo-doxygen
ChangedBucketsItem...
Generating docs for compound anatomist::RoiChangeProcessor...
Generating docs for compound anatomist::PaintStrategy...
Generating docs for compound anatomist::PointPaintStrategy...
Generating docs for compound anatomist::SquarePaintStrategy...
Generating docs for compound anatomist::DiskPaintStrategy...
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Generating docs for compound anatomist::PaintActionSharedData...
Generating docs for compound anatomist::PaintAction...
Generating docs for compound anatomist::RoiBlobSegmentationAction...
Generating docs for compound anatomist::PaintControl...
Generating docs for compound anatomist::RoiLevelSetControl...
Generating docs for compound anatomist::RoiLabelNamingControl...
Generating docs for compound anatomist::RoiManagementActionSharedData...
Generating docs for compound anatomist::RoiManagementAction...
Generating docs for compound anatomist::RoiBaseModule...
Generating docs for compound anatomist::CreateGraphCommand...
Generating docs for compound anatomist::GetConnThresholdCommand...
Generating docs for compound anatomist::SetConnThresholdCommand...
Generating docs for compound anatomist::AddNodeCommand...
Generating docs for compound anatomist::PaintParamsCommand...
Generating docs for compound anatomist::RoiDynSegmentAction...
Generating docs for compound anatomist::RoiMorphoMathAction...
Generating docs for compound anatomist::RoiDynSegmentControl...
Generating docs for compound anatomist::RoiAlgoModule...
Generating docs for compound anatomist::HistogramModule...
Generating docs for namespace anatomist::internal
Generating docs for compound anatomist::internal::ColorTraitsType...
Generating docs for compound anatomist::internal::PaletteWinExtensionActions...
Generating docs for compound anatomist::internal::VectorFieldCoordSpinBox...
Generating docs for compound anatomist::internal::AGraphicsView...
Generating docs for compound anatomist::internal::AGraphicsScene...
Generating docs for compound anatomist::internal::TransformerActionData...
Generating docs for compound anatomist::internal::NoDragSlider...
Generating docs for compound anatomist::internal::CommandReader_Bridge...
Generating docs for namespace carto
Generating docs for compound carto::GLWidget...
Generating docs for namespace Vr
Generating docs for compound Vr::Creator...
Generating docs for compound Vr::CubeZBuffer...
Generating docs for compound Vr::MIPShader...
Generating docs for compound Vr::MPVRShader...
Generating docs for compound Vr::RfmtShader...
Generating docs for compound Vr::Shader...
Generating docs for compound Vr::ShaderFactory...
Generating docs for compound Vr::Slicing...
Generating docs for compound Vr::SumShader...
Generating docs for compound Vr::Vector3d...
Generating docs for compound Vr::VRShader...
Generating docs for compound Vr::VrSingleton...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory anatomist/action
Generating dependency graph for directory anatomist
Generating dependency graph for directory anatomist/application
Generating dependency graph for directory anatomist/browser
Generating dependency graph for directory anatomist/bucket
Generating dependency graph for directory anatomist/color
Generating dependency graph for directory anatomist/commands
Generating dependency graph for directory anatomist/constrainteditor
Generating dependency graph for directory anatomist/control
Generating dependency graph for directory anatomist/controler
Generating dependency graph for directory anatomist/erpio
Generating dependency graph for directory anatomist/graph
Generating dependency graph for directory anatomist/hierarchy
Generating dependency graph for directory anatomist/interface
Generating dependency graph for directory anatomist/interpoler
Generating dependency graph for directory anatomist/landmark
Generating dependency graph for directory anatomist/mobject
Generating dependency graph for directory anatomist/module
Generating dependency graph for directory anatomist/object
Generating [ 95%] Built target sigraph-doxygen
[ 95%] Built target primatologist-gpl-doxygen
[100%] Create "share/doc/5.2"
[100%] Built target highres-cortex-doxygen
[100%] Built target brainrat-private-doxygen
[100%] Built target cortical_surface-doxygen
/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
[100%] Built target aims-free-devdoc
[100%] Create "share/doc/5.2"
[100%] Create "share/doc/5.2"
[100%] Create "share/doc/5.2"
[100%] Create "share/doc/5.2"
[100%] Create "share/doc/5.2"
[100%] Built target highres-cortex-devdoc
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[100%] Built target cortical_surface-nonfree-devdoc
[100%] Built target aims-free-doc
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[100%] Built target highres-cortex-doc
[100%] Built target brainrat-private-doc
[100%] Built target primatologist-gpl-doc
[100%] Built target sulci-nonfree-doc
[100%] Built target cortical_surface-nonfree-doc
dependency graph for directory anatomist/processor
Generating dependency graph for directory anatomist/reference
Generating dependency graph for directory anatomist/selection
Generating dependency graph for directory anatomist/sparsematrix
Generating dependency graph for directory anatomist/stdmod
Generating dependency graph for directory anatomist/surface
Generating dependency graph for directory anatomist/surfmatcher
Generating dependency graph for directory anatomist/volume
Generating dependency graph for directory anatomist/window
Generating dependency graph for directory anatomist/window3D
Generating dependency graph for directory anatomist/winhisto
Generating dependency graph for directory anatomist/winprof
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 18411/65536 hits=112114 misses=22457
finished...
[100%] Built target anatomist-gpl-sphinx
[100%] Built target anatomist-doxygen
[100%] Built target pyanatomist-doxygen
[100%] Create "share/doc/5.2"
[100%] Built target anatomist-free-devdoc
[100%] Create "share/doc/5.2"
[100%] Built target anatomist-gpl-devdoc
[100%] Built target anatomist-free-doc
[100%] Built target anatomist-gpl-doc
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,973::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,973::INFO::Found '3' process(es) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,973::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,975::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,977::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.training.SulciDeepTraining'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,978::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,978::INFO::process: '3' files written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,978::INFO::Writing module 'sulci_labeling' index at location '/casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:15,979::INFO::Index: an index has been written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/master/sphinx/process_docs/deepsulci/sulci_labeling.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,245::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,325::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,401::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,529::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,618::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,711::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,868::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,881::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:16,958::INFO::Pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:17,665::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:17,835::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:17,911::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:17,911::INFO::Summary: '14' files written for module 'capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:17,941::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:18,026::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:18,104::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:18,327::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:18,415::INFO::Pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:18,415::INFO::Summary: '14' files written for module 'capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:18,703::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:18,703::INFO::Found '40' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:18,703::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:19,058::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:19,058::INFO::Found '40' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:19,058::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_view.py::2025-07-03 04:59:21,980::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,390::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,399::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,490::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,502::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,567::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,652::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,669::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,708::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,729::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,744::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,756::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,781::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,791::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,885::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,898::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:22,963::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,048::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,067::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,112::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,133::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,148::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,161::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,872::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,893::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,910::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,910::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,911::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,912::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,914::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,914::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,916::INFO::Processing pipeline 'morphologist.capsul.axon.brainvolumes.brainvolumes'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,918::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,919::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,920::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,921::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,922::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,923::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,924::INFO::Processing pipeline 'morphologist.capsul.axon.morpho_report.morpho_report'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,925::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,933::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,934::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,935::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,936::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,937::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,938::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,939::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,940::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,942::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,943::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,944::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,945::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,946::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,948::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,949::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,950::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,951::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,953::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,954::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,955::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,957::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,958::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,959::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,960::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,967::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,969::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,970::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,971::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,972::INFO::process: '40' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,972::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:23,972::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,357::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,378::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,397::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,398::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,398::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,400::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,401::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,402::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,404::INFO::Processing pipeline 'morphologist.capsul.axon.brainvolumes.brainvolumes'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,405::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,406::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,408::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,408::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,409::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,410::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,412::INFO::Processing pipeline 'morphologist.capsul.axon.morpho_report.morpho_report'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,413::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,420::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,421::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,422::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,423::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,425::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,426::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,427::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,428::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,429::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,431::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,431::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,433::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,434::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,436::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,436::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,438::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,439::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,440::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,442::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,443::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,445::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,446::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,447::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,448::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,455::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,457::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,457::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,459::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,459::INFO::process: '40' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,460::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:24,460::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist/capsul.
generating CAPSUL processes docs...
['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist', '--schema']
loading pickled environment... done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
generating CAPSUL processes docs...
['/usr/bin/python3.10', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/process_docs/morphologist', '--schema']
loading pickled environment... done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.3/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.2/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.3/sphinx/objects.inv...
loading intersphinx inventory from doc/morphologist-ui-5.2/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'doc/morphologist-ui-5.2/objects.inv' not fetchable due to &lt;class 'FileNotFoundError'&gt;: [Errno 2] No such file or directory: '/casa/host/src/morphologist/morphologist-gpl/master/sphinx/user_doc/doc/morphologist-ui-5.2/objects.inv'
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 57 source files that are out of date
updating environment: 0 added, 57 changed, 0 removed
reading sources... [  1%] process_docs/morphologist/capsul/index
reading sources... [  3%] process_docs/morphologist/capsul/pipeline/index
reading sources... [  5%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
reading sources... [  7%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
reading sources... [  8%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
reading sources... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
reading sources... [ 12%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, sulpated.rst
building [mo]: targets for 0 po files that are out of date
writing output... 
reading sources... [ 14%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
building [html]: targets for 57 source files that are out of date
updating environment: 0 added, 57 changed, 0 removed
reading sources... [  1%] process_docs/morphologist/capsul/index
reading sources... [ 15%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
reading sources... [  3%] process_docs/morphologist/capsul/pipeline/index
reading sources... [  5%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
reading sources... [ 17%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
reading sources... [ 19%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
reading sources... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
reading sources... [ 22%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
reading sources... [ 24%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
reading sources... [  7%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
reading sources... [  8%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
reading sources... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
reading sources... [ 12%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
reading sources... [ 26%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
reading sources... [ 14%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
reading sources... [ 28%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
reading sources... [ 15%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
reading sources... [ 29%] process_docs/morphologist/capsul/process/index
reading sources... [ 31%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.acpcorientation.AcpcOrientation
reading sources... [ 17%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
reading sources... [ 33%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.aimsconverter.AimsConverter
reading sources... [ 35%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims
reading sources... [ 36%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
reading sources... [ 19%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
reading sources... [ 38%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainvolumes.brainvolumes
reading sources... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
reading sources... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
reading sources... [ 22%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
reading sources... [ 42%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
reading sources... [ 43%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh
reading sources... [ 24%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
reading sources... [ 45%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
reading sources... [ 47%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.histoanalysis.HistoAnalysis
reading sources... [ 49%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.importt1mri.ImportT1MRI
reading sources... [ 50%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morpho_report.morpho_report
reading sources... [ 52%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morphologistprocess.morphologistProcess
reading sources... [ 54%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister
reading sources... [ 56%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_baladin.Normalization_Baladin
reading sources... [ 57%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit
reading sources... [ 59%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit
reading sources... [ 61%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
reading sources... [ 63%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
reading sources... [ 64%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.pialmesh.PialMesh
reading sources... [ 66%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.reorientanatomy.ReorientAnatomy
reading sources... [ 26%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
reading sources... [ 68%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.scalpmesh.ScalpMesh
reading sources... [ 70%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.skullstripping.skullstripping
reading sources... [ 28%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
reading sources... [ 71%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.splitbrain.SplitBrain
reading sources... [ 29%] process_docs/morphologist/capsul/process/index
reading sources... [ 31%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.acpcorientation.AcpcOrientation
reading sources... [ 73%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims
reading sources... [ 75%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraph.SulciGraph
reading sources... [ 33%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.aimsconverter.AimsConverter
reading sources... [ 35%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims
reading sources... [ 77%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject
reading sources... [ 36%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
reading sources... [ 78%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN
reading sources... [ 80%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal
reading sources... [ 38%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainvolumes.brainvolumes
reading sources... [ 82%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal
reading sources... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
reading sources... [ 84%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov
reading sources... [ 42%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
reading sources... [ 85%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton
reading sources... [ 43%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh
reading sources... [ 45%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
reading sources... [ 87%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection
reading sources... [ 47%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.histoanalysis.HistoAnalysis
reading sources... [ 89%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation
reading sources... [ 49%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.importt1mri.ImportT1MRI
reading sources... [ 91%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
reading sources... [ 50%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morpho_report.morpho_report
reading sources... [ 92%] process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri
reading sources... [ 52%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morphologistprocess.morphologistProcess
reading sources... [ 94%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple
reading sources... [ 54%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister
reading sources... [ 56%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_baladin.Normalization_Baladin
reading sources... [ 57%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit
reading sources... [ 59%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit
reading sources... [ 61%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
reading sources... [ 63%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
reading sources... [ 64%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.pialmesh.PialMesh
reading sources... [ 66%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.reorientanatomy.ReorientAnatomy
reading sources... [ 68%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.scalpmesh.ScalpMesh
reading sources... [ 96%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView
reading sources... [ 70%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.skullstripping.skullstripping
reading sources... [ 71%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.splitbrain.SplitBrain
reading sources... [ 98%] process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel
reading sources... [ 73%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims
reading sources... [100%] process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
reading sources... [ 75%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraph.SulciGraph

/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/master/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
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/casa/host/src/capsul/master/capsul/sphinxext/capsul_pipeline_rst.py::2025-07-03 04:59:28,436::INFO::Found '6' process(es) in 'deepsulci.pattern_classification.capsul'.
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bv_maker summary:
OK          step doc: /casa/host/build, started: 2025/07/03 04:58, stopped: 2025/07/03 05:01
All went good.

Finished: SUCCESS