Console Output

Coloration syntaxique du code du module...[ 36%] brainvisa.data.neuroData
Coloration syntaxique du code du module...[ 38%] brainvisa.data.neuroDiskItems
Coloration syntaxique du code du module...[ 40%] brainvisa.data.neuroHierarchy
Coloration syntaxique du code du module...[ 42%] brainvisa.data.patterns
Coloration syntaxique du code du module...[ 44%] brainvisa.data.qt4gui.databaseCheckGUI
Coloration syntaxique du code du module...[ 45%] brainvisa.data.qt4gui.diskItemBrowser
Coloration syntaxique du code du module...[ 47%] brainvisa.data.qt4gui.hierarchyBrowser
Coloration syntaxique du code du module...[ 49%] brainvisa.data.qt4gui.history
Coloration syntaxique du code du module...[ 51%] brainvisa.data.qt4gui.labelSelectionGUI
Coloration syntaxique du code du module...[ 53%] brainvisa.data.qt4gui.neuroDataGUI
Coloration syntaxique du code du module...[ 55%] brainvisa.data.qt4gui.readdiskitemGUI
Coloration syntaxique du code du module...[ 56%] brainvisa.data.qt4gui.updateDatabases
Coloration syntaxique du code du module...[ 58%] brainvisa.data.readdiskitem
Coloration syntaxique du code du module...[ 60%] brainvisa.data.sqlFSODatabase
Coloration syntaxique du code du module...[ 62%] brainvisa.data.temporary
Coloration syntaxique du code du module...[ 64%] brainvisa.data.virtualDirectory
Coloration syntaxique du code du module...[ 65%] brainvisa.data.writediskitem
Coloration syntaxique du code du module...[ 67%] brainvisa.history
Coloration syntaxique du code du module...[ 69%] brainvisa.multipleExecfile
Coloration syntaxique du code du module...[ 71%] brainvisa.processes
Coloration syntaxique du code du module...[ 73%] brainvisa.processing.axon_fso_to_fom
Coloration syntaxique du code du module...[ 75%] brainvisa.processing.axon_to_capsul
Coloration syntaxique du code du module...[ 76%] brainvisa.processing.capsul_process
Coloration syntaxique du code du module...[ 78%] brainvisa.processing.neuroException
Coloration syntaxique du code du module...[ 80%] brainvisa.processing.neuroLog
Coloration syntaxique du code du module...[ 82%] brainvisa.processing.process_based_viewer
Coloration syntaxique du code du module...[ 84%] brainvisa.processing.qt4gui.neuroExceptionGUI
Coloration syntaxique du code du module...[ 85%] brainvisa.processing.qt4gui.neuroLogGUI
Coloration syntaxique du code du module...[ 87%] brainvisa.processing.qt4gui.neuroProcessesGUI
Coloration syntaxique du code du module...[ 89%] brainvisa.registration
Coloration syntaxique du code du module...[ 91%] brainvisa.toolboxes
Coloration syntaxique du code du module...[ 93%] brainvisa.tools.aimsGlobals
Coloration syntaxique du code du module...[ 95%] brainvisa.tools.displayTitledGrid
Coloration syntaxique du code du module...[ 96%] brainvisa.tools.spm_run
Coloration syntaxique du code du module...[ 98%] brainvisa.tools.spm_utils
Coloration syntaxique du code du module...[100%] brainvisa.validation

Écriture des pages additionnelles... search fait
Export de l'index de recherche en English (code: en)... fait
Export de l'inventaire des objets... fait
La compilation a réussi, 5 avertissements.

Les pages HTML sont dans ../../share/doc/axon-6.0/dev_doc.
[100%] Built target axon-sphinx
[100%] Create "share/doc/6.0"
[100%] Built target axon-devdoc
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,487::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,487::INFO::Found '3' process(es) in 'deepsulci.sulci_labeling.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,487::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,488::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,488::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.training.SulciDeepTraining'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,489::INFO::Writing index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,489::INFO::process: '3' files written for module 'sulci_labeling' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,489::INFO::Writing module 'sulci_labeling' index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:51,489::INFO::Index: an index has been written for module 'sulci_labeling' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:52,411::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:52,460::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:52,509::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:52,595::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:52,642::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:52,694::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:53,165::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:53,210::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:53,272::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:53,272::INFO::Summary: '15' files written for module 'capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:53,800::INFO::Found '15' pipeline(s) in 'morphologist.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:53,800::INFO::Found '44' process(es) in 'morphologist.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:53,800::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/home_local/a-sac-ns-brainvisa/tmp/runtime-a-sac-ns-brainvisa'
QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/home_local/a-sac-ns-brainvisa/tmp/runtime-a-sac-ns-brainvisa'
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:54,674::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:54,674::INFO::Summary: '15' files written for module 'capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:55,097::ERROR::Traceback (most recent call last):
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/capsul/svm_training.py", line 8, in <module>
    from ..method.svm import SVMPatternClassification
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/method/svm.py", line 24, in <module>
    import pcl
ModuleNotFoundError: No module named 'pcl'

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:55,098::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_training
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:55,099::ERROR::Traceback (most recent call last):
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/capsul/svm_labeling.py", line 7, in <module>
    from ..method.svm import SVMPatternClassification
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/method/svm.py", line 24, in <module>
    import pcl
ModuleNotFoundError: No module named 'pcl'

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:55,099::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_labeling
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_view.py::2026-04-01 05:50:55,099::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:55,227::INFO::Found '15' pipeline(s) in 'morphologist.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:55,227::INFO::Found '44' process(es) in 'morphologist.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:55,227::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
Starting Anatomist.....
config file : /home/a-sac-ns-brainvisa/.anatomist/config/settings.cfg
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
PyAnatomist Module present
PythonLauncher::runModules()
Multitexturing present
function glActiveTexture found.
function glClientActiveTexture found.
function glBlendEquation found.
function glTexImage3D found.
function glMultiTexCoord3f found.
function glBindFramebuffer found.
function glBindRenderbuffer found.
function glFramebufferTexture2D found.
function glGenFramebuffers found.
function glGenRenderbuffers found.
function glFramebufferRenderbuffer found.
function glRenderbufferStorage found.
function glCheckFramebufferStatus found.
function glDeleteRenderbuffers found.
function glDeleteFramebuffers found.
Number of texture units: 8
function glUniform1f found.
function glUniform1i found.
function glUniform4fv found.
function glGetUniformLocation found.
function glMultTransposeMatrixf found.
function glAttachShader found.
function glDetachShader found.
function glCompileShader found.
function glCreateProgram found.
function glCreateShader found.
function glDeleteProgram found.
function glDeleteShader found.
function glGetProgramiv found.
function glGetShaderiv found.
function glLinkProgram found.
function glShaderSource found.
function glUseProgram found.
GL_ARB_shadow present
GL_SGIX_shadow extension not available
GL_SGIX_depth_texture extension not available
GL_ARB_depth_texture extension present
GL_ARB_texture_cube_map extension present
GL_EXT_texture_cube_map extension present
Number of texture units: 8
This plugin does not support raise()
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
This plugin does not support raise()
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
This plugin does not support raise()
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
This plugin does not support raise()
This plugin does not support raise()
This plugin does not support propagateSizeHints()
This plugin does not support raise()
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:56,918::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:56,926::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
This plugin does not support propagateSizeHints()
This plugin does not support propagateSizeHints()
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,001::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,011::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,021::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,058::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,101::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,110::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,130::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,140::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,147::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,153::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,666::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,677::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,686::INFO::Writing index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,686::INFO::pipeline: '15' files written for module 'capsul' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,686::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,687::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,688::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,688::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,689::INFO::Processing pipeline 'morphologist.capsul.axon.brainvolumes.brainvolumes'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,690::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,691::INFO::Processing pipeline 'morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,691::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,692::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,692::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,693::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,693::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,694::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,694::INFO::Processing pipeline 'morphologist.capsul.axon.morpho_report.morpho_report'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,695::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,699::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,699::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,700::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,700::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,701::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,701::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,702::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,703::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,703::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,704::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,704::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,705::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,705::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,706::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,707::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,707::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,708::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,708::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,709::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,710::INFO::Processing pipeline 'morphologist.capsul.axon.sulcivoronoi.sulcivoronoi'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,710::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,711::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,711::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,712::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,713::INFO::Processing pipeline 'morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,713::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,717::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,718::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,718::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,719::INFO::Writing index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/process/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,719::INFO::process: '44' files written for module 'capsul' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/process.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,719::INFO::Writing module 'capsul' index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:57,719::INFO::Index: an index has been written for module 'capsul' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul.

Notebook error!

Versions
========

* Platform:         linux; (Linux-6.8.0-86-generic-x86_64-with-glibc2.39)
* Python version:   3.11.0 (CPython)
* Sphinx version:   8.2.3
* Docutils version: 0.21.2
* Jinja2 version:   3.1.6
* Pygments version: 2.19.2

Last Messages
=============

    construction en cours [mo] : cibles périmées pour les fichiers po 0
    écriture...

    construction [html] : cibles périmées pour les fichiers sources 42
    mise à jour de l'environnement :
    [nouvelle configuration]
    42 ajouté(s), 0 modifié(s), 0 supprimé(s)
    lecture des sources... [  2%]
    ana_notebook

Loaded Extensions
=================

* sphinx.ext.mathjax (8.2.3)
* alabaster (1.0.0)
* sphinxcontrib.applehelp (2.0.0)
* sphinxcontrib.devhelp (2.0.0)
* sphinxcontrib.htmlhelp (2.1.0)
* sphinxcontrib.serializinghtml (1.1.10)
* sphinxcontrib.qthelp (2.0.0)
* sphinx.ext.autodoc.preserve_defaults (8.2.3)
* sphinx.ext.autodoc.type_comment (8.2.3)
* sphinx.ext.autodoc.typehints (8.2.3)
* sphinx.ext.autodoc (8.2.3)
* sphinx.ext.intersphinx (8.2.3)
* sphinx.ext.todo (8.2.3)
* sphinx.ext.coverage (8.2.3)
* sphinx.ext.ifconfig (8.2.3)
* sphinx.ext.viewcode (8.2.3)
* sphinx.ext.extlinks (8.2.3)
* sphinx.ext.graphviz (8.2.3)
* sphinx.ext.inheritance_diagram (8.2.3)
* sphinx.ext.autosummary (8.2.3)
* sphinx.ext.napoleon (8.2.3)
* sphinx_gallery.gen_gallery (0.20.0)
* nbsphinx (0.9.8)

Traceback
=========

      File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/lib/python3.11/site-packages/nbsphinx/__init__.py", line 662, in parse
        raise NotebookError(
    nbsphinx.NotebookError: DeadKernelError in ana_notebook.ipynb:
    Kernel died


La trace complète a été sauvegardée dans :
/home_local/a-sac-ns-brainvisa/tmp/sphinx-err-w96jpnd1.log

Pour signaler cette erreur aux développeurs, veuillez ouvrir un ticket à l'adresse <https://github.com/sphinx-doc/sphinx/issues/>. Merci !
Merci de rapporter ceci s'il s'agit d'une erreur utilisateur, afin d'améliorer le message d'erreur à l'avenir.
PyAnatomist Module present
PythonLauncher::runModules()
generating CAPSUL processes docs...
['/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/bin/python3.11', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist', '--schema']
chargement des traductions [en]... fait
Conversion de  `source_suffix = '.rst'` en `source_suffix = {'.rst': 'restructuredtext'}`.
chargement de l'environnement pickled... fait
chargement de l'inventaire intersphinx 'somabase' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv ...
chargement de l'inventaire intersphinx 'pyaims' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'pyana' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv'
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'somaworkflow' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv'
[autosummary] engendrement d’un auto-sommaire pour : index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcivoronoi.sulcivoronoi.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst
construction en cours [mo] : cibles périmées pour les fichiers po 0
écriture... 
construction [html] : cibles périmées pour les fichiers sources 62
mise à jour de l'environnement : 0 ajouté(s), 62 modifié(s), 0 supprimé(s)
lecture des sources... [  2%] process_docs/morphologist/capsul/index
lecture des sources... [  3%] process_docs/morphologist/capsul/pipeline/index
lecture des sources... [  5%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,411::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,419::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
lecture des sources... [  6%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
lecture des sources... [  8%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
lecture des sources... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,494::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld'...
lecture des sources... [ 11%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
[100%] Built target anatomist-gpl-sphinx
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,504::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
lecture des sources... [ 13%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,514::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
lecture des sources... [ 15%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
[100%] Create "share/doc/6.0"
lecture des sources... [ 16%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
[100%] Built target anatomist-gpl-devdoc
lecture des sources... [ 18%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,567::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
lecture des sources... [ 19%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
[100%] Built target anatomist-gpl-doc
lecture des sources... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
lecture des sources... [ 23%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,636::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
lecture des sources... [ 24%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,651::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,683::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,698::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,711::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,721::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
lecture des sources... [ 26%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
lecture des sources... [ 27%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
lecture des sources... [ 29%] process_docs/morphologist/capsul/process/index
lecture des sources... [ 31%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.acpcorientation.AcpcOrientation
lecture des sources... [ 32%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.aimsconverter.AimsConverter
lecture des sources... [ 34%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims
lecture des sources... [ 35%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
lecture des sources... [ 37%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainvolumes.brainvolumes
lecture des sources... [ 39%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness
lecture des sources... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure
lecture des sources... [ 42%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
lecture des sources... [ 44%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
lecture des sources... [ 45%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh
lecture des sources... [ 47%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
lecture des sources... [ 48%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.histoanalysis.HistoAnalysis
lecture des sources... [ 50%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.importt1mri.ImportT1MRI
lecture des sources... [ 52%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morpho_report.morpho_report
lecture des sources... [ 53%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morphologistprocess.morphologistProcess
lecture des sources... [ 55%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister
lecture des sources... [ 56%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_baladin.Normalization_Baladin
lecture des sources... [ 58%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit
lecture des sources... [ 60%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit
lecture des sources... [ 61%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
lecture des sources... [ 63%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
lecture des sources... [ 65%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.pialmesh.PialMesh
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,992::ERROR::Traceback (most recent call last):
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/capsul/svm_training.py", line 8, in <module>
    from ..method.svm import SVMPatternClassification
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/method/svm.py", line 24, in <module>
    import pcl
ModuleNotFoundError: No module named 'pcl'

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,993::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_training
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,993::ERROR::Traceback (most recent call last):
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/capsul/svm_labeling.py", line 7, in <module>
    from ..method.svm import SVMPatternClassification
  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/method/svm.py", line 24, in <module>
    import pcl
ModuleNotFoundError: No module named 'pcl'

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,993::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_labeling
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,994::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,994::INFO::Found '4' process(es) in 'deepsulci.pattern_classification.capsul'.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,994::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,995::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,996::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,996::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,997::INFO::Writing index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,997::INFO::process: '4' files written for module 'pattern_classification' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,997::INFO::Writing module 'pattern_classification' index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:58,997::INFO::Index: an index has been written for module 'pattern_classification' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification.
lecture des sources... [ 66%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.reorientanatomy.ReorientAnatomy
lecture des sources... [ 68%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.scalpmesh.ScalpMesh
lecture des sources... [ 69%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.skullstripping.skullstripping
lecture des sources... [ 71%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.splitbrain.SplitBrain
lecture des sources... [ 73%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims
lecture des sources... [ 74%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraph.SulciGraph
lecture des sources... [ 76%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject
lecture des sources... [ 77%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN
lecture des sources... [ 79%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal
lecture des sources... [ 81%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal
lecture des sources... [ 82%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov
lecture des sources... [ 84%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton
lecture des sources... [ 85%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcivoronoi.sulcivoronoi
lecture des sources... [ 87%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection
lecture des sources... [ 89%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation
lecture des sources... [ 90%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
lecture des sources... [ 92%] process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri
lecture des sources... [ 94%] process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus
lecture des sources... [ 95%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple
lecture des sources... [ 97%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView
lecture des sources... [ 98%] process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel
lecture des sources... [100%] process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:66: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:70: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:70: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
recherche des fichiers périmés... aucun résultat trouvé
Environnement de sérialisation... fait
vérification de la cohérence... fait
documents en préparation... fait
copie des ressources... 
Copie des fichiers statiques... 
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/dev_doc/_static/documentation_options.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/dev_doc/_static/language_data.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/dev_doc/_static/basic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/dev_doc/_static/classic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/dev_doc/_static/sidebar.js
Copie des fichiers statiques: fait
copie des fichiers complémentaires... 
copie des fichiers complémentaires: fait
copie des ressources: fait
écriture... [  2%] index
écriture... [  3%] process_docs/morphologist/capsul/index
écriture... [  5%] process_docs/morphologist/capsul/pipeline/index
écriture... [  6%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
écriture... [  8%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
écriture... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
écriture... [ 11%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld
écriture... [ 13%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
écriture... [ 14%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
generating CAPSUL processes docs...
['/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/bin/python3.11', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.sulci_labeling.capsul', '-o', '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci', '--schema']
['/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/bin/python3.11', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.pattern_classification.capsul', '-o', '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci', '--schema']
chargement des traductions [en]... fait
écriture... [ 16%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
écriture... [ 17%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
écriture... [ 19%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
écriture... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
écriture... [ 22%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
écriture... [ 24%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
écriture... [ 25%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
écriture... [ 27%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
écriture... [ 29%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
écriture... [ 30%] process_docs/morphologist/capsul/process/index
écriture... [ 32%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.acpcorientation.AcpcOrientation
écriture... [ 33%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.aimsconverter.AimsConverter
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,529::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
écriture... [ 35%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims
écriture... [ 37%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
écriture... [ 38%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainvolumes.brainvolumes
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,547::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
écriture... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness
écriture... [ 41%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure
écriture... [ 43%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
WARNING: L’entrée '_static' de html_static_path n’existe pas
Conversion de  `source_suffix = '.rst'` en `source_suffix = {'.rst': 'restructuredtext'}`.
chargement de l'environnement pickled... /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,561::INFO::Writing index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,562::INFO::pipeline: '15' files written for module 'capsul' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,562::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,563::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
écriture... [ 44%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,564::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,565::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,566::INFO::Processing pipeline 'morphologist.capsul.axon.brainvolumes.brainvolumes'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,567::INFO::Processing pipeline 'morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,568::INFO::Processing pipeline 'morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,569::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
écriture... [ 46%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,570::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,571::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,571::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,572::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,573::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
écriture... [ 48%] /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,574::INFO::Processing pipeline 'morphologist.capsul.axon.morpho_report.morpho_report'...
process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,575::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
écriture... [ 49%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.histoanalysis.HistoAnalysis
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,581::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,582::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,583::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,584::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
écriture... [ 51%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.importt1mri.ImportT1MRI
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,585::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,586::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,586::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,587::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,588::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
écriture... [ 52%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morpho_report.morpho_report
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,589::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,590::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,591::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,591::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,593::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,593::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,594::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
écriture... [ 54%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morphologistprocess.morphologistProcess
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,595::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,596::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,597::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,598::INFO::Processing pipeline 'morphologist.capsul.axon.sulcivoronoi.sulcivoronoi'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,599::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,601::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,601::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,602::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,603::INFO::Processing pipeline 'morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,604::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,610::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
écriture... [ 56%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,611::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,612::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,613::INFO::Writing index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/process/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,613::INFO::process: '44' files written for module 'capsul' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/process.
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,613::INFO::Writing module 'capsul' index at location '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/index.rst'...
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/capsul/sphinxext/capsul_pipeline_rst.py::2026-04-01 05:50:59,614::INFO::Index: an index has been written for module 'capsul' at location /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul.
écriture... [ 57%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_baladin.Normalization_Baladin
écriture... [ 59%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit
écriture... [ 60%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit
écriture... [ 62%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
écriture... [ 63%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
écriture... [ 65%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.pialmesh.PialMesh
fait
écriture... [ 67%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.reorientanatomy.ReorientAnatomy
écriture... [ 68%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.scalpmesh.ScalpMesh
écriture... [ 70%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.skullstripping.skullstripping
chargement de l'inventaire intersphinx 'somabase' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'pyaims' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'pyana' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'somaworkflow' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv ...
chargement de l'inventaire intersphinx 'python' de https://docs.python.org/3.11/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv'
écriture... [ 71%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.splitbrain.SplitBrain
écriture... [ 73%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims
écriture... [ 75%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraph.SulciGraph
écriture... [ 76%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject
écriture... [ 78%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN
écriture... [ 79%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal
écriture... [ 81%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal
écriture... [ 83%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov
écriture... [ 84%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton
écriture... [ 86%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcivoronoi.sulcivoronoi
écriture... [ 87%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection
écriture... [ 89%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation
écriture... [ 90%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
écriture... [ 92%] process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri
écriture... [ 94%] process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus
écriture... [ 95%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple
écriture... [ 97%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView
écriture... [ 98%] process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel
écriture... [100%] process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization

génération des index... genindex fait
Coloration syntaxique du code du module...
Écriture des pages additionnelles... search fait
copie des images... [  7%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png
copie des images... [ 13%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png
copie des images... [ 20%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png
copie des images... [ 27%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.png
copie des images... [ 33%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png
copie des images... [ 40%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png
copie des images... [ 47%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png
copie des images... [ 53%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png
copie des images... [ 60%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png
copie des images... [ 67%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png
copie des images... [ 73%] process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png
copie des images... [ 80%] process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png
copie des images... [ 87%] process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png
copie des images... [ 93%] process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png
copie des images... [100%] process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png

Export de l'index de recherche en English (code: en)... fait
Export de l'inventaire des objets... fait
La compilation a réussi, 12 avertissements.

Les pages HTML sont dans ../../share/doc/morphologist-6.0/dev_doc.
[autosummary] engendrement d’un auto-sommaire pour : api.rst, index.rst, process_docs/deepsulci/pattern_classification/index.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst, process_docs/deepsulci/pattern_classification/process/index.rst, process_docs/deepsulci/sulci_labeling/index.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst, process_docs/deepsulci/sulci_labeling/process/index.rst
[100%] Built target morphologist-gpl-sphinx
[100%] Create "share/doc/6.0"
[100%] Built target morphologist-gpl-devdoc
generating CAPSUL processes docs...
['/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/bin/python3.11', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist', '--schema']
chargement des traductions [en]... fait
Conversion de  `source_suffix = '.rst'` en `source_suffix = {'.rst': 'restructuredtext'}`.
chargement de l'environnement pickled... fait
chargement de l'inventaire intersphinx 'somabase' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-base-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'pyaims' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyaims-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'pyana' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv ...
chargement de l'inventaire intersphinx 'somaworkflow' de /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/pyanatomist-6.0/sphinx/objects.inv'
chargement de l'inventaire intersphinx 'morphouiusr' de doc/morphologist-ui-6.0/objects.inv ...
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/share/doc/soma-workflow-6.0/sphinx/objects.inv'
WARNING: échec d'accès à un quelconque inventaire, messages de contexte suivants :
intersphinx inventory 'doc/morphologist-ui-6.0/objects.inv' not readable due to FileNotFoundError: [Errno 2] Aucun fichier ou dossier de ce nom: '/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/doc/morphologist-ui-6.0/objects.inv'
[autosummary] engendrement d’un auto-sommaire pour : changelog.md, index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, sulpated.rst
myst v4.0.1: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
construction en cours [mo] : cibles périmées pour les fichiers po 0
écriture... 
construction [html] : cibles périmées pour les fichiers sources 62
mise à jour de l'environnement : 0 ajouté(s), 62 modifié(s), 0 supprimé(s)
lecture des sources... [  2%] process_docs/morphologist/capsul/index
lecture des sources... [  3%] process_docs/morphologist/capsul/pipeline/index
lecture des sources... [  5%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
lecture des sources... [  6%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
lecture des sources... [  8%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
lecture des sources... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld
lecture des sources... [ 11%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
lecture des sources... [ 13%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
lecture des sources... [ 15%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
lecture des sources... [ 16%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
lecture des sources... [ 18%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
lecture des sources... [ 19%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
lecture des sources... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
lecture des sources... [ 23%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
lecture des sources... [ 24%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
lecture des sources... [ 26%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
lecture des sources... [ 27%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
lecture des sources... [ 29%] process_docs/morphologist/capsul/process/index
lecture des sources... [ 31%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.acpcorientation.AcpcOrientation
lecture des sources... [ 32%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.aimsconverter.AimsConverter
lecture des sources... [ 34%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims
lecture des sources... [ 35%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
lecture des sources... [ 37%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainvolumes.brainvolumes
lecture des sources... [ 39%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness
lecture des sources... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure
lecture des sources... [ 42%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
lecture des sources... [ 44%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
lecture des sources... [ 45%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh
lecture des sources... [ 47%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
lecture des sources... [ 48%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.histoanalysis.HistoAnalysis
lecture des sources... [ 50%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.importt1mri.ImportT1MRI
lecture des sources... [ 52%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morpho_report.morpho_report
lecture des sources... [ 53%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morphologistprocess.morphologistProcess
lecture des sources... [ 55%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister
lecture des sources... [ 56%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_baladin.Normalization_Baladin
lecture des sources... [ 58%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit
lecture des sources... [ 60%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit
lecture des sources... [ 61%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
lecture des sources... [ 63%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
lecture des sources... [ 65%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.pialmesh.PialMesh
lecture des sources... [ 66%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.reorientanatomy.ReorientAnatomy
lecture des sources... [ 68%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.scalpmesh.ScalpMesh
lecture des sources... [ 69%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.skullstripping.skullstripping
lecture des sources... [ 71%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.splitbrain.SplitBrain
lecture des sources... [ 73%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims
lecture des sources... [ 74%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraph.SulciGraph
lecture des sources... [ 76%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject
lecture des sources... [ 77%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN
lecture des sources... [ 79%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal
lecture des sources... [ 81%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal
lecture des sources... [ 82%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov
lecture des sources... [ 84%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton
lecture des sources... [ 85%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcivoronoi.sulcivoronoi
lecture des sources... [ 87%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection
lecture des sources... [ 89%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation
lecture des sources... [ 90%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
lecture des sources... [ 92%] process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri
lecture des sources... [ 94%] process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus
lecture des sources... [ 95%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple
lecture des sources... [ 97%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView
lecture des sources... [ 98%] process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel
lecture des sources... [100%] process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:66: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:70: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: libellé dupliqué morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:30: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:70: WARNING: libellé dupliqué morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
recherche des fichiers périmés... aucun résultat trouvé
Environnement de sérialisation... fait
vérification de la cohérence... /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/index.rst:10: WARNING: La citation [FISCHER2012] n'est pas référencée [ref.citation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/index.rst:118: WARNING: La citation [PERROT2009] n'est pas référencée [ref.citation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/index.rst:120: WARNING: La citation [PERROT2011] n'est pas référencée [ref.citation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/index.rst:129: WARNING: La citation [TUCHOLKA2008] n'est pas référencée [ref.citation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/index.rst:134: WARNING: La citation [KELLER2009] n'est pas référencée [ref.citation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morphologist-gpl/sphinx/user_doc/index.rst:139: WARNING: La citation [VAROQUAUX2010] n'est pas référencée [ref.citation]
fait
documents en préparation... fait
copie des ressources... 
Copie des fichiers statiques... 
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/user_doc/_static/documentation_options.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/user_doc/_static/language_data.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/user_doc/_static/basic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/user_doc/_static/classic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morphologist-6.0/user_doc/_static/sidebar.js
Copie des fichiers statiques: fait
copie des fichiers complémentaires... 
copie des fichiers complémentaires: fait
copie des ressources: fait
écriture... [  2%] process_docs/morphologist/capsul/index
écriture... [  3%] process_docs/morphologist/capsul/pipeline/index
écriture... [  5%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
écriture... [  6%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
écriture... [  8%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
écriture... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld
écriture... [ 11%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
écriture... [ 13%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
écriture... [ 15%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
écriture... [ 16%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
écriture... [ 18%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
écriture... [ 19%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
écriture... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
écriture... [ 23%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline
écriture... [ 24%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
écriture... [ 26%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
WARNING: Failed to import deepsulci.pattern_classification.method.svm.
Possible hints:
* ModuleNotFoundError: No module named 'pcl'
* AttributeError: module 'deepsulci.pattern_classification.method' has no attribute 'svm'
pcl.registration missing !
construction en cours [mo] : cibles périmées pour les fichiers po 0
écriture... 
construction [html] : cibles périmées pour les fichiers sources 11
mise à jour de l'environnement : 0 ajouté(s), 12 modifié(s), 0 supprimé(s)
lecture des sources... [  8%] api
écriture... [ 27%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
écriture... [ 29%] process_docs/morphologist/capsul/process/index
écriture... [ 31%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.acpcorientation.AcpcOrientation
écriture... [ 32%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.aimsconverter.AimsConverter
écriture... [ 34%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims
écriture... [ 35%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainsegmentation.BrainSegmentation
écriture... [ 37%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.brainvolumes.brainvolumes
écriture... [ 39%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.corticalfoldsgraphthickness.CorticalFoldsGraphThickness
écriture... [ 40%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.foldgraphupgradestructure.foldgraphupgradestructure
écriture... [ 42%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims
écriture... [ 44%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi
écriture... [ 45%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh
écriture... [ 47%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology
écriture... [ 48%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.histoanalysis.HistoAnalysis
écriture... [ 50%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.importt1mri.ImportT1MRI
écriture... [ 52%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morpho_report.morpho_report
écriture... [ 53%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.morphologistprocess.morphologistProcess
écriture... [ 55%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister
écriture... [ 56%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_baladin.Normalization_Baladin
écriture... [ 58%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit
écriture... [ 60%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit
écriture... [ 61%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit
écriture... [ 63%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit
écriture... [ 65%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.pialmesh.PialMesh
écriture... [ 66%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.reorientanatomy.ReorientAnatomy
écriture... [ 68%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.scalpmesh.ScalpMesh
écriture... [ 69%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.skullstripping.skullstripping
écriture... [ 71%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.splitbrain.SplitBrain
écriture... [ 73%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims
écriture... [ 74%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraph.SulciGraph
écriture... [ 76%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject
écriture... [ 77%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN
écriture... [ 79%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal
écriture... [ 81%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal
écriture... [ 82%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov
écriture... [ 84%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton
écriture... [ 85%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcivoronoi.sulcivoronoi
écriture... [ 87%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection
écriture... [ 89%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation
écriture... [ 90%] process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization
écriture... [ 92%] process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri
écriture... [ 94%] process_docs/morphologist/capsul/process/morphologist.capsul.morpho_intersubject_status.MorphoInterSubjectStatus
écriture... [ 95%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple
écriture... [ 97%] process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView
écriture... [ 98%] process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel
écriture... [100%] process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization

génération des index... genindex fait
Coloration syntaxique du code du module...
Écriture des pages additionnelles... search fait
copie des images... [  7%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png
copie des images... [ 13%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png
copie des images... [ 20%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png
copie des images... [ 27%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.corticalfoldsgraphupgradefromold.CorticalFoldsGraphUpgradeFromOld.png
copie des images... [ 33%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png
copie des images... [ 40%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png
copie des images... [ 47%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png
copie des images... [ 53%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png
copie des images... [ 60%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png
copie des images... [ 67%] process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png
copie des images... [ 73%] process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png
copie des images... [ 80%] process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png
copie des images... [ 87%] process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png
copie des images... [ 93%] process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png
copie des images... [100%] process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png

Export de l'index de recherche en English (code: en)... fait
Export de l'inventaire des objets... fait
La compilation a réussi, 19 avertissements.

Les pages HTML sont dans ../../share/doc/morphologist-6.0/user_doc.
[100%] Built target morphologist-gpl-usrsphinx
[100%] Create "share/doc/6.0"
pcl.registration missing !
lecture des sources... [ 17%] process_docs/deepsulci/pattern_classification/index
[100%] Built target morphologist-gpl-usrdoc
lecture des sources... [ 25%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling
lecture des sources... [ 33%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining
lecture des sources... [ 42%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling
[100%] Built target morphologist-gpl-doc
lecture des sources... [ 50%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining
[100%] Built target usrdoc
lecture des sources... [ 58%] process_docs/deepsulci/pattern_classification/process/index
lecture des sources... [ 67%] process_docs/deepsulci/sulci_labeling/index
lecture des sources... [ 75%] process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation
lecture des sources... [ 83%] process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling
lecture des sources... [ 92%] process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining
lecture des sources... [100%] process_docs/deepsulci/sulci_labeling/process/index

WARNING: autodoc: failed to import module 'svm' from module 'deepsulci.pattern_classification.method'; the following exception was raised:
['Traceback (most recent call last):\n', '  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/lib/python3.11/site-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n    module = import_module(modname, try_reload=True)\n             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', '  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/lib/python3.11/site-packages/sphinx/ext/autodoc/importer.py", line 175, in import_module\n    module = importlib.import_module(modname)\n             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', '  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/.pixi/envs/default/lib/python3.11/importlib/__init__.py", line 126, in import_module\n    return _bootstrap._gcd_import(name[level:], package, level)\n           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', '  File "<frozen importlib._bootstrap>", line 1206, in _gcd_import\n', '  File "<frozen importlib._bootstrap>", line 1178, in _find_and_load\n', '  File "<frozen importlib._bootstrap>", line 1149, in _find_and_load_unlocked\n', '  File "<frozen importlib._bootstrap>", line 690, in _load_unlocked\n', '  File "<frozen importlib._bootstrap_external>", line 940, in exec_module\n', '  File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed\n', '  File "/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/lib/python3.11/site-packages/deepsulci/pattern_classification/method/svm.py", line 24, in <module>\n    import pcl\n', "ModuleNotFoundError: No module named 'pcl'\n"] [autodoc.import_object]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/index.rst:23: CRITICAL: Problems with "include" directive path:
InputError: [Errno 2] Aucun fichier ou dossier de ce nom: '../../../src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/pipeline/index.rst'. [docutils]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/index.rst:21: WARNING: libellé dupliqué pipelines, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/index.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/index]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/index.rst:26: WARNING: libellé dupliqué buildingblocks, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/index.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/index]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst:11: WARNING: libellé dupliqué deepsulci.pattern_classification.capsul.resnet_labeling.patterndeeplabeling, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst:32: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst:47: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst:11: WARNING: libellé dupliqué deepsulci.pattern_classification.capsul.resnet_training.patterndeeptraining, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst:56: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst:84: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst:11: WARNING: libellé dupliqué deepsulci.pattern_classification.capsul.snipe_labeling.patternsnipelabeling, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst:33: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst:53: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst:11: WARNING: libellé dupliqué deepsulci.pattern_classification.capsul.snipe_training.patternsnipetraining, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst:50: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst:74: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst [autosectionlabel.process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/index.rst:23: CRITICAL: Problems with "include" directive path:
InputError: [Errno 2] Aucun fichier ou dossier de ce nom: '../../../src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/pipeline/index.rst'. [docutils]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/index.rst:21: WARNING: libellé dupliqué pipelines, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/index.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/index]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/index.rst:26: WARNING: libellé dupliqué buildingblocks, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/index.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/index]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst:11: WARNING: libellé dupliqué deepsulci.sulci_labeling.capsul.error_computation.errorcomputation, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst:38: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst:55: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst:11: WARNING: libellé dupliqué deepsulci.sulci_labeling.capsul.labeling.sulcideeplabeling, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst:36: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst:69: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst:11: WARNING: libellé dupliqué deepsulci.sulci_labeling.capsul.training.sulcideeptraining, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst:60: WARNING: libellé dupliqué inputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst:88: WARNING: libellé dupliqué outputs, l'autre instance se trouve dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/morpho-deepsulci/sphinx/process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst [autosectionlabel.process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining]
recherche des fichiers périmés... aucun résultat trouvé
Environnement de sérialisation... fait
vérification de la cohérence... fait
documents en préparation... fait
copie des ressources... 
Copie des fichiers statiques... 
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morpho-deepsulci-6.0/dev_doc/_static/documentation_options.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morpho-deepsulci-6.0/dev_doc/_static/language_data.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morpho-deepsulci-6.0/dev_doc/_static/basic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morpho-deepsulci-6.0/dev_doc/_static/classic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/morpho-deepsulci-6.0/dev_doc/_static/sidebar.js
Copie des fichiers statiques: fait
copie des fichiers complémentaires... 
copie des fichiers complémentaires: fait
copie des ressources: fait
écriture... [  8%] api
écriture... [ 15%] index
écriture... [ 23%] process_docs/deepsulci/pattern_classification/index
écriture... [ 31%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling
écriture... [ 38%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining
écriture... [ 46%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling
écriture... [ 54%] process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining
écriture... [ 62%] process_docs/deepsulci/pattern_classification/process/index
écriture... [ 69%] process_docs/deepsulci/sulci_labeling/index
écriture... [ 77%] process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation
écriture... [ 85%] process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling
écriture... [ 92%] process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining
écriture... [100%] process_docs/deepsulci/sulci_labeling/process/index

génération des index... genindex py-modindex fait
Coloration syntaxique du code du module...[ 10%] deepsulci.deeptools.dataset
Coloration syntaxique du code du module...[ 20%] deepsulci.deeptools.early_stopping
Coloration syntaxique du code du module...[ 30%] deepsulci.deeptools.models
Coloration syntaxique du code du module...[ 40%] deepsulci.patchtools.optimized_patchmatch
Coloration syntaxique du code du module...[ 50%] deepsulci.pattern_classification.analyse.stats
Coloration syntaxique du code du module...[ 60%] deepsulci.pattern_classification.method.resnet
Coloration syntaxique du code du module...[ 70%] deepsulci.pattern_classification.method.snipe
Coloration syntaxique du code du module...[ 80%] deepsulci.sulci_labeling.analyse.stats
Coloration syntaxique du code du module...[ 90%] deepsulci.sulci_labeling.method.cutting
Coloration syntaxique du code du module...[100%] deepsulci.sulci_labeling.method.unet

Écriture des pages additionnelles... search fait
Export de l'index de recherche en English (code: en)... fait
Export de l'inventaire des objets... fait
La compilation a réussi, 34 avertissements.

Les pages HTML sont dans ../../share/doc/morpho-deepsulci-6.0/dev_doc.
[100%] Built target morpho-deepsulci-sphinx
[100%] Create "share/doc/6.0"
[100%] Built target morpho-deepsulci-devdoc
[100%] Built target morpho-deepsulci-doc

/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/doc/source/tutorial/capsul_tutorial.ipynb:1724: ERROR: Duplicate substitution definition name: "xml pipeline". [docutils]
/home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/src/capsul/doc/source/tutorial/capsul_tutorial.ipynb:1725: ERROR: Duplicate substitution definition name: "xml pipeline controller". [docutils]
recherche des fichiers périmés... aucun résultat trouvé
Environnement de sérialisation... fait
vérification de la cohérence... fait
documents en préparation... fait
copie des ressources... 
Copie des fichiers statiques... 
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/capsul-2.6/_static/documentation_options.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/capsul-2.6/_static/language_data.js
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/capsul-2.6/_static/basic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/capsul-2.6/_static/classic.css
Écriture du résultat du modèle évalué dans /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build/share/doc/capsul-2.6/_static/sidebar.js
Copie des fichiers statiques: fait
copie des fichiers complémentaires... 
copie des fichiers complémentaires: fait
copie des ressources: fait
écriture... [ 50%] tutorial/capsul_tutorial
écriture... [100%] user_guide_tree/index

génération des index... genindex py-modindex fait
copying linked files... 
copying notebooks ... [100%] tutorial/capsul_tutorial.ipynb

Coloration syntaxique du code du module...[  1%] PyQt5.QtCore
Coloration syntaxique du code du module...[  3%] capsul.attributes.attributes_factory
Coloration syntaxique du code du module...[  4%] capsul.attributes.attributes_schema
Coloration syntaxique du code du module...[  5%] capsul.attributes.completion_engine
Coloration syntaxique du code du module...[  6%] capsul.attributes.completion_engine_factory
Coloration syntaxique du code du module...[  8%] capsul.attributes.completion_engine_iteration
Coloration syntaxique du code du module...[  9%] capsul.attributes.fom_completion_engine
Coloration syntaxique du code du module...[ 10%] capsul.engine
Coloration syntaxique du code du module...[ 12%] capsul.engine.database
Coloration syntaxique du code du module...[ 13%] capsul.engine.database_json
Coloration syntaxique du code du module...[ 14%] capsul.engine.database_populse
Coloration syntaxique du code du module...[ 15%] capsul.engine.module.attributes
Coloration syntaxique du code du module...[ 17%] capsul.engine.module.axon
Coloration syntaxique du code du module...[ 18%] capsul.engine.module.fom
Coloration syntaxique du code du module...[ 19%] capsul.engine.module.fsl
Coloration syntaxique du code du module...[ 21%] capsul.engine.module.matlab
Coloration syntaxique du code du module...[ 22%] capsul.engine.module.python
Coloration syntaxique du code du module...[ 23%] capsul.engine.module.spm
Coloration syntaxique du code du module...[ 24%] capsul.engine.run
Coloration syntaxique du code du module...[ 26%] capsul.engine.settings
Coloration syntaxique du code du module...[ 27%] capsul.in_context.fsl
Coloration syntaxique du code du module...[ 28%] capsul.in_context.spm
Coloration syntaxique du code du module...[ 29%] capsul.pipeline.custom_nodes.cv_node
Coloration syntaxique du code du module...[ 31%] capsul.pipeline.custom_nodes.loo_node
Coloration syntaxique du code du module...[ 32%] capsul.pipeline.custom_nodes.map_node
Coloration syntaxique du code du module...[ 33%] capsul.pipeline.custom_nodes.reduce_node
Coloration syntaxique du code du module...[ 35%] capsul.pipeline.custom_nodes.strcat_node
Coloration syntaxique du code du module...[ 36%] capsul.pipeline.custom_nodes.strconv
Coloration syntaxique du code du module...[ 37%] capsul.pipeline.pipeline
Coloration syntaxique du code du module...[ 38%] capsul.pipeline.pipeline_construction
Coloration syntaxique du code du module...[ 40%] capsul.pipeline.pipeline_nodes
Coloration syntaxique du code du module...[ 41%] capsul.pipeline.pipeline_tools
Coloration syntaxique du code du module...[ 42%] capsul.pipeline.pipeline_workflow
Coloration syntaxique du code du module...[ 44%] capsul.pipeline.process_iteration
Coloration syntaxique du code du module...[ 45%] capsul.pipeline.python_export
Coloration syntaxique du code du module...[ 46%] capsul.pipeline.topological_sort
Coloration syntaxique du code du module...[ 47%] capsul.pipeline.xml
Coloration syntaxique du code du module...[ 49%] capsul.process.nipype_process
Coloration syntaxique du code du module...[ 50%] capsul.process.process
Coloration syntaxique du code du module...[ 51%] capsul.process.runprocess
Coloration syntaxique du code du module...[ 53%] capsul.process.xml
Coloration syntaxique du code du module...[ 54%] capsul.qt_apps.main_window
Coloration syntaxique du code du module...[ 55%] capsul.qt_apps.pipeline_viewer_app
Coloration syntaxique du code du module...[ 56%] capsul.qt_apps.utils.application
Coloration syntaxique du code du module...[ 58%] capsul.qt_apps.utils.fill_treectrl
Coloration syntaxique du code du module...[ 59%] capsul.qt_apps.utils.find_pipelines
Coloration syntaxique du code du module...[ 60%] capsul.qt_apps.utils.window
Coloration syntaxique du code du module...[ 62%] capsul.qt_gui.board_widget
Coloration syntaxique du code du module...[ 63%] capsul.qt_gui.widgets.activation_inspector
Coloration syntaxique du code du module...[ 64%] capsul.qt_gui.widgets.attributed_process_widget
Coloration syntaxique du code du module...[ 65%] capsul.qt_gui.widgets.links_debugger
Coloration syntaxique du code du module...[ 67%] capsul.qt_gui.widgets.pipeline_developer_view
Coloration syntaxique du code du module...[ 68%] capsul.qt_gui.widgets.pipeline_file_warning_widget
Coloration syntaxique du code du module...[ 69%] capsul.qt_gui.widgets.pipeline_user_view
Coloration syntaxique du code du module...[ 71%] capsul.qt_gui.widgets.viewer_widget
Coloration syntaxique du code du module...[ 72%] capsul.sphinxext.layoutdocgen
Coloration syntaxique du code du module...[ 73%] capsul.sphinxext.load_pilots
Coloration syntaxique du code du module...[ 74%] capsul.sphinxext.pipelinedocgen
Coloration syntaxique du code du module...[ 76%] capsul.sphinxext.usecasesdocgen
Coloration syntaxique du code du module...[ 77%] capsul.study_config.config_modules.attributes_config
Coloration syntaxique du code du module...[ 78%] capsul.study_config.config_modules.brainvisa_config
Coloration syntaxique du code du module...[ 79%] capsul.study_config.config_modules.fom_config
Coloration syntaxique du code du module...[ 81%] capsul.study_config.config_modules.freesurfer_config
Coloration syntaxique du code du module...[ 82%] capsul.study_config.config_modules.fsl_config
Coloration syntaxique du code du module...[ 83%] capsul.study_config.config_modules.matlab_config
Coloration syntaxique du code du module...[ 85%] capsul.study_config.config_modules.nipype_config
Coloration syntaxique du code du module...[ 86%] capsul.study_config.config_modules.smartcaching_config
Coloration syntaxique du code du module...[ 87%] capsul.study_config.config_modules.somaworkflow_config
Coloration syntaxique du code du module...[ 88%] capsul.study_config.config_modules.spm_config
Coloration syntaxique du code du module...[ 90%] capsul.study_config.config_utils
Coloration syntaxique du code du module...[ 91%] capsul.study_config.memory
Coloration syntaxique du code du module...[ 92%] capsul.study_config.process_instance
Coloration syntaxique du code du module...[ 94%] capsul.study_config.run
Coloration syntaxique du code du module...[ 95%] capsul.study_config.study_config
Coloration syntaxique du code du module...[ 96%] capsul.subprocess.fsl
Coloration syntaxique du code du module...[ 97%] capsul.subprocess.spm
Coloration syntaxique du code du module...[ 99%] capsul.utils.finder
Coloration syntaxique du code du module...[100%] capsul.utils.version_utils

Écriture des pages additionnelles... search fait
copie des images... [  6%] tutorial/images/capsul_pipeline1.jpg
copie des images... [ 11%] tutorial/images/capsul_controller1.jpg
copie des images... [ 17%] tutorial/images/capsul_pipeline2.jpg
copie des images... [ 22%] tutorial/images/capsul_pipeline_xml2.jpg
copie des images... [ 28%] tutorial/images/capsul_pipeline_xml2_controller.jpg
copie des images... [ 33%] tutorial/images/capsul_pipeline_xml1.jpg
copie des images... [ 39%] tutorial/images/capsul_pipeline_xml1_controller.jpg
copie des images... [ 44%] tutorial/images/capsul_pipeline3.jpg
copie des images... [ 50%] tutorial/images/capsul_iter1.jpg
copie des images... [ 56%] tutorial/images/capsul_pipeline5.jpg
copie des images... [ 61%] tutorial/images/capsul_pipeline6.jpg
copie des images... [ 67%] tutorial/images/capsul_pipeline6b.jpg
copie des images... [ 72%] tutorial/images/capsul_pipeline7.jpg
copie des images... [ 78%] tutorial/images/capsul_fom1.jpg
copie des images... [ 83%] tutorial/images/capsul_fom1_compl.jpg
copie des images... [ 89%] tutorial/images/capsul_fom1_controller.jpg
copie des images... [ 94%] tutorial/images/capsul_fom2.jpg
copie des images... [100%] tutorial/images/capsul_fom2_compl.jpg

Export de l'index de recherche en English (code: en)... fait
Export de l'inventaire des objets... fait
La compilation a réussi, 4 avertissements.

Les pages HTML sont dans ../../share/doc/capsul-2.6.
[100%] Built target capsul-sphinx
[100%] Create "share/doc/2.6"
[100%] Built target capsul-devdoc
[100%] Built target capsul-doc
[100%] Built target devdoc
Generating BrainVISA processes documentation
[100%] Built target bv_ontology_doc
[100%] Built target bv_doc_index
[100%] Built target axon-doc
[100%] Built target doc

bv_maker summary:
OK          step doc: /home_local/a-sac-ns-brainvisa/bbi-daily/brainvisa-web/build, started: 2026/04/01 05:50, stopped: 2026/04/01 05:53
All went good.

Finished: SUCCESS