Started
Running as <a href='/builds/user/brainvisa' class='jenkins-table__link model-link model-link--float'>brainvisa</a>
----------------------------------------
$ /usr/bin/python3 /volatile/a-sac-ns-brainvisa/bbi_nightly/cea-master-5.3/src/development/casa-distro/master/bin/casa_distro bv_maker name=cea-5.1-5.3 -- doc
----------------------------------------
Building docs in directory: /casa/host/build
$ make -j12 -l12 doc
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Running Sphinx v6.2.1
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loading pickled environment... loading pickled environment... done
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loading intersphinx inventory from <a href='https://docs.python.org/3.10/objects.inv'>https://docs.python.org/3.10/objects.inv</a>...
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loading pickled environment... [autosummary] generating autosummary for: api.rst, index.rst
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done
[autosummary] generating autosummary for: bv_command.rst, bv_command_help.rst, casa_distro_admin_command.rst, casa_distro_admin_command_help.rst, casa_distro_command.rst, casa_distro_command_help.rst, concepts.rst, developer.rst, index.rst, nightly.rst, technical.rst
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generating indices... genindex done
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build succeeded.

The HTML pages are in ../../share/doc/soma-io-5.1.
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loading pickled environment... loading pickled environment... [autosummary] generating autosummary for: aims_config.rst, aims_io.rst, changelog.rst, coordinates_systems.rst, formats.rst, index.rst, spm_format.rst, tutorial.rst
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done
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copying static files... reading sources... [ 83%] casa_distro_command
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build succeeded.

The HTML pages are in ../../share/doc/brainrat-gpl-5.1/user_doc.
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../../../src/development/casa-distro/5.1/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
/casa/host/src/development/casa-distro/5.1/doc/source/bv_command_help.rst:13: WARNING: Option list ends without a blank line; unexpected unindent.
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/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:580: WARNING: duplicate label casa_distro_admin_command:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:40: WARNING: duplicate label casa-distro-admin-help-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:57: WARNING: duplicate label casa-distro-admin-singularity-deb-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:83: WARNING: duplicate label casa-distro-admin-create-base-image-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:204: WARNING: duplicate label casa-distro-admin-publish-base-image-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:245: WARNING: duplicate label casa-distro-admin-create-user-image-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:368: WARNING: duplicate label casa-distro-admin-publish-user-image-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:394: WARNING: duplicate label casa-distro-admin-bbi-daily-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:530: WARNING: duplicate label casa-distro-admin-local-install-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:576: WARNING: duplicate label casa-distro-admin-convert-image-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:63: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:117: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst
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/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:263: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:383: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:456: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst:537: WARNING: duplicate label casa_distro_admin_command_help:parameters, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_admin_command_help.rst
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../../../src/development/casa-distro/5.1/doc/source/casa_distro_command_help.rst:292: ERROR: Unexpected indentation.
/casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_command_help.rst:40: WARNING: duplicate label casa-distro-help-help, other instance in /casa/host/src/development/casa-distro/5.1/doc/source/casa_distro_command_help.rst
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looking for now-outdated files... none found
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[NbConvertApp] Writing 59246 bytes to /casa/host/src/capsul/5.1/doc/source/tutorial/capsul_tutorial.ipynb
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[autosummary] generating autosummary for: axon_manual.rst, axon_manual2.rst, changelog.rst, connectomist_tutorial.rst, index.rst, morphologist_tutorial.rst, tutorial.rst
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[autosummary] generating autosummary for: index.rst
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generating indices... genindex hwloc/linux: Ignoring PCI device with non-16bit domain.
Pass --enable-32bits-pci-domain to configure to support such devices
(warning: it would break the library ABI, don't enable unless really needed).
Authorization required, but no authorization protocol specified
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Using Qt backend: PyQt5
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dest: /casa/host/build/share/doc/capsul-2.3
cwd: /casa/host/src/capsul/5.1/doc/source
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loading pickled environment... Running Sphinx v6.2.1
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).

/casa/host/src/morphologist/morphologist-ui/5.1/doc/sphinx/user/index.rst:78: WARNING: undefined label: 'study'
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done
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writing additional pages... search [autosummary] generating autosummary for: bv_env.rst, bv_maker.rst, bv_maker_help.rst, bv_maker_help_build.rst, bv_maker_help_configure.rst, bv_maker_help_doc.rst, bv_maker_help_info.rst, bv_maker_help_install_pack.rst, bv_maker_help_pack.rst, bv_maker_help_publish_pack.rst, ..., bv_maker_help_testref.rst, bv_maker_help_testref_pack.rst, cmake_functions.rst, compile_existing.rst, configuration.rst, dependencies.rst, documenting.rst, index.rst, new_project.rst, testing_monitoring.rst
/casa/host/src/anatomist/anatomist-free/5.1/sphinxman/index.rst:104: WARNING: toctree contains reference to document 'changelog' that doesn't have a title: no link will be generated
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/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/dependencies.rst:40: WARNING: Could not lex literal_block 'BRAINVISA_DEPENDENCY( &lt;pack_type&gt; &lt;dependency_type&gt; &lt;component&gt; &lt;component_pack_type&gt; [ &lt;version ranges&gt; ] [BINARY_INDEPENDENT] ).' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/new_project.rst:470: WARNING: unknown document: 'bv_packaging'
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/new_project.rst:486: WARNING: unknown document: 'bv_packaging'
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/new_project.rst:278: WARNING: Could not lex literal_block 'BRAINVISA_ADD_MOC_FILES &lt;result variable&gt; &lt;header files&gt;' as "cmake". Highlighting skipped.
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/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/new_project.rst:298: WARNING: Could not lex literal_block 'BRAINVISA_ADD_TRANSLATION &lt;source_share_dir&gt; &lt;dest_share_dir&gt; &lt;component&gt;' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/new_project.rst:377: WARNING: Could not lex literal_block 'SET( DOXYFILE_PROJECT_NAME, "My wonderful project" ).' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/new_project.rst:506: WARNING: Could not lex literal_block 'BRAINVISA_INSTALL' as "cmake". Highlighting skipped.
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/testing_monitoring.rst:52: WARNING: undefined label: 'package_directory'
/casa/host/src/development/brainvisa-cmake/5.1/doc/sphinx/testing_monitoring.rst:232: WARNING: undefined label: 'package_directory'
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done
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dumping search index in English (code: en)... done
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build succeeded, 12 warnings.

The HTML pages are in ../../share/doc/brainvisa-cmake-5.1.
h.h...
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,329::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.

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build succeeded, 1 warning.

The HTML pages are in ../../share/doc/populse_db-2.2.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,405::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
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done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
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loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.1/sphinx/objects.inv...
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loading intersphinx inventory from <a href='https://docs.python.org/3.10/objects.inv'>https://docs.python.org/3.10/objects.inv</a>...
Running Sphinx v6.2.1
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,497::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,586::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
Running Sphinx v6.2.1
[ 13%] Built target populse_db-sphinx

generating indices... genindex [ 13%] Create "share/doc/5.1"
done
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writing additional pages... search done
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,732::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
done
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dumping object inventory... done
build succeeded, 1 warning.

The HTML pages are in ../../../share/doc/aimsdata-5.1/dev_doc.
[ 13%] Create "share/doc/5.1"
[ 13%] Built target constellation-gpl-devdoc
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,783::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
[ 13%] Create "share/doc/5.1"
[ 13%] Built target cortical_surface-gpl-devdoc
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:15,836::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
[ 13%] Create "share/doc/5.1"
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updating environment: 0 added, 0 changed, 0 removed
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[ 13%] Built target aimsdata-sphinx
warning: Tag 'SYMBOL_CACHE_SIZE' at line 295 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 479 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
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warning: Tag 'COLS_IN_ALPHA_INDEX' at line 750 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
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warning: Tag 'HTML_ALIGN_MEMBERS' at line 805 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1142 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
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warning: Tag 'XML_DTD' at line 1148 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
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warning: Tag 'PERL_PATH' at line 1313 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
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warning: Tag 'MSCGEN_PATH' at line 1335 of file '/casa/host/build/build_files/aims-free/aimsgui/src/CiftiLib-1.5.1/Doxyfile' has become obsolete.
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warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
warning: source '/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/example' is not a readable file or directory... skipping.
[ 13%] Built target aims-gpl-doc
writing output... [ 40%] commands
[ 13%] Built target aims-free_target_16
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:500: warning: include file stdint.h not found, perhaps you forgot to add its directory to INCLUDE_PATH?
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1469: warning: Reached end of file while still inside a (nested) comment. Nesting level 2 (probable line reference: 1443, 1437)
[ 20%] Built target soma-io_target_6
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:501: warning: missing title after \defgroup NIFTI1_DATATYPES
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:541: warning: missing title after \defgroup NIFTI1_DATATYPE_ALIASES
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:703: warning: missing title after \defgroup NIFTI1_INTENT_CODES
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1189: warning: missing title after \defgroup NIFTI1_XFORM_CODES
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1253: warning: missing title after \defgroup NIFTI1_UNITS
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1394: warning: missing title after \defgroup NIFTI1_SLICE_ORDER
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:36: warning: include file stdint.h not found, perhaps you forgot to add its directory to INCLUDE_PATH?
reading sources... [ 20%] api/engine
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:40: warning: Compound cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:65: warning: Compound cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:43: warning: Compound cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:67: warning: Compound cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:61: warning: Compound cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:51: warning: Compound cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:56: warning: Compound cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:102: warning: Compound cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:111: warning: Compound cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:42: warning: Compound cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:38: warning: Compound cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:44: warning: Compound cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:47: warning: Compound cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:40: warning: Compound cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:35: warning: Compound cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:37: warning: Compound cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Compact3DLookup.h:37: warning: Compound cifti::Compact3DLookup is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:39: warning: Compound cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:76: warning: Compound cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:48: warning: Compound cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:37: warning: Compound cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:48: warning: Compound cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:39: warning: Compound cifti::Label is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:44: warning: Compound cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MatrixFunctions.h:42: warning: Compound cifti::MatrixFunctions is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:44: warning: Compound cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:40: warning: Compound cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:38: warning: Compound cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:42: warning: Compound cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:48: warning: Compound cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:49: warning: Compound cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:97: warning: Compound cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:36: warning: Compound cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:41: warning: Compound cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:35: warning: Compound cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:147: warning: Compound cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:149: warning: Compound cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.cxx:51: warning: no matching class member found for 
  void CiftiBrainModelsMap::addSurfaceModel(const int64_t &amp;numberOfNodes, const cifti::StructureEnum::Enum &amp;structure, const vector&lt; int64_t &gt; &amp;nodeList)
Possible candidates:
  'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const float *roi=NULL)'
  'void cifti::CiftiBrainModelsMap::addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const std::vector&lt; int64_t &gt; &amp;nodeList)'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.cxx:236: warning: no matching class member found for 
  void CiftiXML::readXML(const vector&lt; char &gt; &amp;text)
Possible candidates:
  'void cifti::CiftiXML::readXML(XmlReader &amp;xml)'
  'void cifti::CiftiXML::readXML(const std::vector&lt; char &gt; &amp;text)'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:60: warning: no matching class member found for 
  VolumeSpace::VolumeSpace(int64_t[3] dims[3], const vector&lt; vector&lt; float &gt; &gt; &amp;sform)
Possible candidates:
  'cifti::VolumeSpace::VolumeSpace()'
  'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform)'
  'cifti::VolumeSpace::VolumeSpace(const int64_t dims[3], const float sform[12])'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.cxx:70: warning: no matching class member found for 
  void VolumeSpace::setSpace(int64_t[3] dims[3], const vector&lt; vector&lt; float &gt; &gt; &amp;sform)
Possible candidates:
  'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform)'
  'void cifti::VolumeSpace::setSpace(const int64_t dims[3], const float sform[12])'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:217: warning: no matching class member found for 
  void CiftiFile::getRow(float *dataOut, const vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const
Possible candidates:
  'void cifti::CiftiFile::getRow(float *dataOut, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead=false) const'
  'void cifti::CiftiFile::getRow(float *dataOut, const int64_t &amp;index, const bool &amp;tolerateShortRead=false) const'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:252: warning: no matching class member found for 
  void CiftiFile::setRow(const float *dataIn, const vector&lt; int64_t &gt; &amp;indexSelect)
Possible candidates:
  'void cifti::CiftiFile::setRow(const float *dataIn, const std::vector&lt; int64_t &gt; &amp;indexSelect)'
  'void cifti::CiftiFile::setRow(const float *dataIn, const int64_t &amp;index)'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:330: warning: documented symbol 'CiftiMemoryImpl::CiftiMemoryImpl' was not declared or defined.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:336: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::getRow(float *dataOut, const vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;) const

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:346: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::getColumn(float *dataOut, const int64_t &amp;index) const

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:359: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::setRow(const float *dataIn, const vector&lt; int64_t &gt; &amp;indexSelect)

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:369: warning: no uniquely matching class member found for 
  void CiftiMemoryImpl::setColumn(const float *dataIn, const int64_t &amp;index)

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:382: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:427: warning: documented symbol 'CiftiOnDiskImpl::CiftiOnDiskImpl' was not declared or defined.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:458: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::getRow(float *dataOut, const vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:463: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::getColumn(float *dataOut, const int64_t &amp;index) const

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:477: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::setRow(const float *dataIn, const vector&lt; int64_t &gt; &amp;indexSelect)

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.cxx:482: warning: no uniquely matching class member found for 
  void CiftiOnDiskImpl::setColumn(const float *dataIn, const int64_t &amp;index)

[ 20%] Built target soma-io_target_7
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:51: warning: no matching class member found for 
  FloatMatrix::FloatMatrix(const vector&lt; vector&lt; float &gt; &gt; &amp;matrixIn)
Possible candidates:
  'cifti::FloatMatrix::FloatMatrix()'
  'cifti::FloatMatrix::FloatMatrix(const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;matrixIn)'
  'cifti::FloatMatrix::FloatMatrix(const int64_t &amp;rows, const int64_t &amp;cols)'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:281: warning: no matching class member found for 
  FloatMatrixRowRef::FloatMatrixRowRef(vector&lt; float &gt; &amp;therow)
Possible candidates:
  'cifti::FloatMatrixRowRef::FloatMatrixRowRef()'
  'cifti::FloatMatrixRowRef::FloatMatrixRowRef(FloatMatrixRowRef &amp;right)'
  'cifti::FloatMatrixRowRef::FloatMatrixRowRef(std::vector&lt; float &gt; &amp;therow)'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.cxx:336: warning: no matching class member found for 
  ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const vector&lt; float &gt; &amp;therow)
Possible candidates:
  'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef()'
  'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &amp;right)'
  'cifti::ConstFloatMatrixRowRef::ConstFloatMatrixRowRef(const std::vector&lt; float &gt; &amp;therow)'

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.cxx:35: warning: no matching file member found for 
XmlAttributesResult cifti::XmlReader_parseAttributes(XmlReader &amp;xml, const vector&lt; AString &gt; &amp;mandatoryNames, const vector&lt; AString &gt; &amp;optionalNames)
Possible candidates:
 'XmlAttributesResult XmlReader_parseAttributes(XmlReader &amp;xml, const std::vector&lt; AString &gt; &amp;mandatoryNames, const std::vector&lt; AString &gt; &amp;optionalNames=std::vector&lt; AString &gt;())' at line 162 of file /casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h

[ 20%] Built target aims-free_target_2
writing output... [ 60%] controler
[ 20%] Built target aims-free_target_9
writing output... [ 80%] developer_details
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1288: warning: Member XYZT_TO_SPACE(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1289: warning: Member XYZT_TO_TIME(xyzt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1292: warning: Member SPACE_TIME_TO_XYZT(ss, tt) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1385: warning: Member DIM_INFO_TO_FREQ_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1386: warning: Member DIM_INFO_TO_PHASE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1387: warning: Member DIM_INFO_TO_SLICE_DIM(di) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1390: warning: Member FPS_INTO_DIM_INFO(fd, pd, sd) (macro definition) of group NIFTI1_UNITS is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti_1_header (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extender (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1: warning: Member nifti1_extension (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member nifti_2_header (typedef) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:116: warning: Member AString_split(const AString &amp;input, const char &amp;delim) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:117: warning: Member AString_split_whitespace(const AString &amp;input) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:118: warning: Member AString_toInt(const AString &amp;input, bool &amp;ok) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/AString.h:119: warning: Member AString_toFloat(const AString &amp;input, bool &amp;ok) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:69: warning: Member operator*(const float &amp;left, const Vector3D &amp;right) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:159: warning: Member XmlReader_readElementText(XmlReader &amp;xml) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:160: warning: Member XmlReader_readNextStartElement(XmlReader &amp;xml) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:161: warning: Member XmlReader_elementName(XmlReader &amp;xml) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:162: warning: Member XmlReader_parseAttributes(XmlReader &amp;xml, const std::vector&lt; AString &gt; &amp;mandatoryNames, const std::vector&lt; AString &gt; &amp;optionalNames=std::vector&lt; AString &gt;()) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:163: warning: Member XmlReader_checkEndElement(XmlReader &amp;xml, const AString &amp;elementName) (function) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:506: warning: Member DT_NONE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:507: warning: Member DT_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:508: warning: Member DT_BINARY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:509: warning: Member DT_UNSIGNED_CHAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:510: warning: Member DT_SIGNED_SHORT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:511: warning: Member DT_SIGNED_INT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:512: warning: Member DT_FLOAT (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:513: warning: Member DT_COMPLEX (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:514: warning: Member DT_DOUBLE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:515: warning: Member DT_RGB (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:516: warning: Member DT_ALL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:519: warning: Member DT_UINT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:520: warning: Member DT_INT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:521: warning: Member DT_INT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:522: warning: Member DT_FLOAT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:523: warning: Member DT_COMPLEX64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:524: warning: Member DT_FLOAT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:525: warning: Member DT_RGB24 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:528: warning: Member DT_INT8 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:529: warning: Member DT_UINT16 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:530: warning: Member DT_UINT32 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:531: warning: Member DT_INT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:532: warning: Member DT_UINT64 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:533: warning: Member DT_FLOAT128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:534: warning: Member DT_COMPLEX128 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:535: warning: Member DT_COMPLEX256 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:707: warning: Member NIFTI_INTENT_CORREL (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:895: warning: Member NIFTI_INTENT_VECTOR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1399: warning: Member NIFTI_SLICE_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1400: warning: Member NIFTI_SLICE_SEQ_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1401: warning: Member NIFTI_SLICE_SEQ_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1402: warning: Member NIFTI_SLICE_ALT_INC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1403: warning: Member NIFTI_SLICE_ALT_DEC (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1404: warning: Member NIFTI_SLICE_ALT_INC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:1405: warning: Member NIFTI_SLICE_ALT_DEC2 (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:38: warning: Member NIFTI_INTENT_CONNECTIVITY_UNKNOWN (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:39: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:40: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TIME (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:41: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SERIES (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:42: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:43: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_TIME (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:44: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SERIES (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:45: warning: Member NIFTI_INTENT_CONNECTIVITY_CONNECTIVITY_TRAJECTORY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:46: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_TRAJECTORY (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:47: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_SCALARS (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:48: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_LABELS (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:49: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_SCALAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:50: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_DENSE (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:51: warning: Member NIFTI_INTENT_CONNECTIVITY_DENSE_PARCELLATED (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:52: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SERIES (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:53: warning: Member NIFTI_INTENT_CONNECTIVITY_PARCELLATED_PARCELLATED_SCALAR (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti2.h:55: warning: Member NIFTI_ECODE_CIFTI (variable) of  cifti is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:46: warning: Member ModelType (enumeration) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:74: warning: Member hasVolumeData() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:75: warning: Member hasVolumeData(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:76: warning: Member hasSurfaceData(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:77: warning: Member getIndexForNode(const int64_t &amp;node, const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:78: warning: Member getIndexForVoxel(const int64_t *ijk, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:79: warning: Member getIndexForVoxel(const int64_t &amp;i, const int64_t &amp;j, const int64_t &amp;k, StructureEnum::Enum *structureOut=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:80: warning: Member getInfoForIndex(const int64_t index) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:81: warning: Member getSurfaceMap(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:82: warning: Member getFullVolumeMap() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:83: warning: Member getVolumeStructureMap(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:84: warning: Member getVolumeSpace() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:85: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:86: warning: Member getSurfaceStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:87: warning: Member getVolumeStructureList() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:88: warning: Member getNodeList(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:89: warning: Member getVoxelList(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:90: warning: Member getModelInfo() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:93: warning: Member addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const float *roi=NULL) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:94: warning: Member addSurfaceModel(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure, const std::vector&lt; int64_t &gt; &amp;nodeList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:95: warning: Member addVolumeModel(const StructureEnum::Enum &amp;structure, const std::vector&lt; int64_t &gt; &amp;ijkList) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:96: warning: Member setVolumeSpace(const VolumeSpace &amp;space) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:97: warning: Member clear() (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:99: warning: Member clone() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:100: warning: Member getType() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:101: warning: Member getLength() const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:102: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:103: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:104: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:105: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:106: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:107: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiBrainModelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:69: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:70: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:71: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:72: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::IndexInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:63: warning: Member m_type (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:64: warning: Member m_structure (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexStart (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:65: warning: Member m_indexCount (variable) of struct cifti::CiftiBrainModelsMap::ModelInfo is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:53: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:54: warning: Member m_surfaceNode (variable) of struct cifti::CiftiBrainModelsMap::SurfaceMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:58: warning: Member m_ciftiIndex (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiBrainModelsMap.h:59: warning: Member m_ijk[3] (variable) of struct cifti::CiftiBrainModelsMap::VolumeMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:45: warning: Member getMapMetadata(const int64_t &amp;index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:46: warning: Member getMapLabelTable(const int64_t &amp;index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:47: warning: Member getMapName(const int64_t &amp;index) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:49: warning: Member setMapMetadata(const int64_t &amp;index, const MetaData &amp;md) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:50: warning: Member setMapLabelTable(const int64_t &amp;index, const LabelTable &amp;lt) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:51: warning: Member setMapName(const int64_t &amp;index, const AString &amp;mapName) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:52: warning: Member setLength(const int64_t &amp;length) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:53: warning: Member clear() (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:55: warning: Member clone() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:56: warning: Member getType() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:57: warning: Member getLength() const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:58: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:59: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:60: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:61: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:62: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiLabelsMap.h:63: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiLabelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:49: warning: Member clone() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:50: warning: Member getType() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:51: warning: Member getLength() const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:52: warning: Member operator==(const CiftiMappingType &amp;rhs) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:54: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:55: warning: Member readXML1(XmlReader &amp;xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:56: warning: Member readXML2(XmlReader &amp;xml)=0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:57: warning: Member writeXML1(XmlWriter &amp;xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:58: warning: Member writeXML2(XmlWriter &amp;xml) const =0 (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:56: warning: Member hasVolumeData() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:57: warning: Member hasSurface(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:58: warning: Member hasSurfaceData(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:59: warning: Member getVolumeSpace() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:60: warning: Member getSurfaceNumberOfNodes(const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:61: warning: Member getIndexForNode(const int64_t &amp;node, const StructureEnum::Enum &amp;structure) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:62: warning: Member getIndexForVoxel(const int64_t *ijk) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:63: warning: Member getIndexForVoxel(const int64_t &amp;i, const int64_t &amp;j, const int64_t &amp;k) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:64: warning: Member getParcelSurfaceStructures() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:65: warning: Member getParcels() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:68: warning: Member addSurface(const int64_t &amp;numberOfNodes, const StructureEnum::Enum &amp;structure) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:69: warning: Member setVolumeSpace(const VolumeSpace &amp;space) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:70: warning: Member addParcel(const Parcel &amp;parcel) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:71: warning: Member clear() (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:73: warning: Member clone() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:74: warning: Member getType() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:75: warning: Member getLength() const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:76: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:77: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:78: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:79: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:80: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:81: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiParcelsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:52: warning: Member operator==(const Parcel &amp;rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:53: warning: Member operator!=(const Parcel &amp;rhs) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:54: warning: Member approximateMatch(const Parcel &amp;rhs, AString *explanation=NULL) const (function) of struct cifti::CiftiParcelsMap::Parcel is not documented.
[ 26%] Built target aims-free_target_15
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:49: warning: Member m_surfaceNodes (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:50: warning: Member m_voxelIndices (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiParcelsMap.h:51: warning: Member m_name (variable) of struct cifti::CiftiParcelsMap::Parcel is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:44: warning: Member CiftiScalarsMap(const CiftiScalarsMap &amp;rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:45: warning: Member operator=(const CiftiScalarsMap &amp;rhs) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:46: warning: Member CiftiScalarsMap(const int64_t &amp;length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:48: warning: Member getMapMetadata(const int64_t &amp;index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:49: warning: Member getMapName(const int64_t &amp;index) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:51: warning: Member setMapMetadata(const int64_t &amp;index, const MetaData &amp;mdIn) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:52: warning: Member setMapName(const int64_t &amp;index, const AString &amp;mapName) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:53: warning: Member setLength(const int64_t &amp;length) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:54: warning: Member clear() (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:56: warning: Member clone() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:57: warning: Member getType() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:58: warning: Member getLength() const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:59: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:60: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:61: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:62: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:63: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiScalarsMap.h:64: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiScalarsMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:38: warning: Member Unit (enumeration) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:41: warning: Member MappingType (enumeration) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:45: warning: Member getStart() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:46: warning: Member getStep() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:47: warning: Member getUnit() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:56: warning: Member CiftiSeriesMap(const int64_t &amp;length, const float &amp;start=0.0f, const float &amp;step=1.0f, const Unit &amp;unit=SECOND) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:63: warning: Member setStart(const float &amp;start) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:64: warning: Member setStep(const float &amp;step) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:65: warning: Member setUnit(const Unit &amp;unit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:66: warning: Member setLength(const int64_t &amp;length) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:72: warning: Member clone() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:73: warning: Member getType() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:74: warning: Member getLength() const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:75: warning: Member operator==(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:84: warning: Member approximateMatch(const CiftiMappingType &amp;rhs, AString *explanation=NULL) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:101: warning: Member readXML1(XmlReader &amp;xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:102: warning: Member readXML2(XmlReader &amp;xml) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:103: warning: Member writeXML1(XmlWriter &amp;xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:104: warning: Member writeXML2(XmlWriter &amp;xml) const (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:53: warning: Member operator!=(const CiftiMappingType &amp;rhs) const (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:68: warning: Member stringToUnit(const AString &amp;string, bool &amp;ok) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:69: warning: Member unitToString(const Unit &amp;theUnit) (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiSeriesMap.h:70: warning: Member getAllUnits() (function) of class cifti::CiftiSeriesMap is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiMappingType.h:61: warning: Member mappingTypeToName(const MappingType &amp;type) (function) of class cifti::CiftiMappingType is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:41: warning: Member getMajor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:42: warning: Member getMinor() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:45: warning: Member CiftiVersion(const int16_t &amp;major, const int16_t &amp;minor) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:46: warning: Member CiftiVersion(const AString &amp;versionString) (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:47: warning: Member toString() const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:48: warning: Member operator&lt;(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:49: warning: Member operator&gt;(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:50: warning: Member operator==(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:51: warning: Member operator!=(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:52: warning: Member operator&lt;=(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiVersion.h:53: warning: Member operator&gt;=(const CiftiVersion &amp;rhs) const (function) of class cifti::CiftiVersion is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:57: warning: Member getNumberOfDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:58: warning: Member getParsedVersion() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:65: warning: Member getFileMetaData() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:67: warning: Member getMappingType(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:68: warning: Member getBrainModelsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:69: warning: Member getBrainModelsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:70: warning: Member getLabelsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:71: warning: Member getLabelsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:72: warning: Member getParcelsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:73: warning: Member getParcelsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:74: warning: Member getScalarsMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:75: warning: Member getScalarsMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:76: warning: Member getSeriesMap(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:77: warning: Member getSeriesMap(const int &amp;direction) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:78: warning: Member getDimensionLength(const int &amp;direction) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:79: warning: Member getDimensions() const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:81: warning: Member setNumberOfDimensions(const int &amp;num) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:82: warning: Member setMap(const int &amp;direction, const CiftiMappingType &amp;mapIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:83: warning: Member setFileMetaData(const MetaData &amp;mdIn) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:84: warning: Member clear() (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:86: warning: Member readXML(XmlReader &amp;xml) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:87: warning: Member readXML(const std::vector&lt; char &gt; &amp;text) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:89: warning: Member writeXMLToVector(const CiftiVersion &amp;writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:90: warning: Member writeXML(XmlWriter &amp;xml, const CiftiVersion &amp;writingVersion=CiftiVersion()) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:96: warning: Member CiftiXML(const CiftiXML &amp;rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:97: warning: Member operator=(const CiftiXML &amp;rhs) (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:98: warning: Member operator==(const CiftiXML &amp;rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:99: warning: Member operator!=(const CiftiXML &amp;rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/CiftiXML.h:100: warning: Member approximateMatch(const CiftiXML &amp;rhs) const (function) of class cifti::CiftiXML is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:82: warning: Member Label(const Label &amp;gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:85: warning: Member operator=(const Label &amp;gl) (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:95: warning: Member hashCode() (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/Label.h:133: warning: Member matches(const Label &amp;rhs, const bool checkColor=false) const (function) of class cifti::Label is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:49: warning: Member LabelTable(const LabelTable &amp;glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:51: warning: Member operator=(const LabelTable &amp;glt) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:53: warning: Member matches(const LabelTable &amp;rhs, const bool checkColors=false) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:55: warning: Member operator==(const LabelTable &amp;rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:57: warning: Member operator!=(const LabelTable &amp;rhs) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:148: warning: Member createLabelsForKeys(const std::set&lt; int32_t &gt; &amp;newKeys) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:150: warning: Member writeXML(XmlWriter &amp;xmlWriter) const (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:152: warning: Member readXml(XmlReader &amp;xml) (function) of class cifti::LabelTable is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/LabelTable.h:156: warning: Member getKeys(std::vector&lt; int32_t &gt; &amp;keysOut) const (function) of class cifti::LabelTable is not documented.
writing output... [100%] index
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:50: warning: Member MetaData(const MetaData &amp;o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:52: warning: Member operator=(const MetaData &amp;o) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:54: warning: Member operator==(const MetaData &amp;rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:56: warning: Member operator!=(const MetaData &amp;rhs) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:94: warning: Member writeCiftiXML1(XmlWriter &amp;xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:95: warning: Member writeCiftiXML2(XmlWriter &amp;xmlWriter) const (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:96: warning: Member readCiftiXML1(XmlReader &amp;xml) (function) of class cifti::MetaData is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/MetaData.h:97: warning: Member readCiftiXML2(XmlReader &amp;xml) (function) of class cifti::MetaData is not documented.
Consolidate compiler generated dependencies of target bv_env
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:47: warning: Member OrientTypes (enumeration) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:57: warning: Member VolumeSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:58: warning: Member VolumeSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:59: warning: Member setSpace(const int64_t dims[3], const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sform) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:60: warning: Member setSpace(const int64_t dims[3], const float sform[12]) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:61: warning: Member getDims() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:62: warning: Member getSform() const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:63: warning: Member getSpacingVectors(Vector3D &amp;iStep, Vector3D &amp;jStep, Vector3D &amp;kStep, Vector3D &amp;origin) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:64: warning: Member matchesVolumeSpace(const VolumeSpace &amp;right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:65: warning: Member operator==(const VolumeSpace &amp;right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:66: warning: Member operator!=(const VolumeSpace &amp;right) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:115: warning: Member indexValid(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:129: warning: Member getIndex(const int64_t &amp;indexIn1, const int64_t &amp;indexIn2, const int64_t &amp;indexIn3) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:135: warning: Member getIndex(const T *indexIn) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:140: warning: Member readCiftiXML1(XmlReader &amp;xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:141: warning: Member readCiftiXML2(XmlReader &amp;xml) (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:142: warning: Member writeCiftiXML1(XmlWriter &amp;xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Cifti/VolumeSpace.h:143: warning: Member writeCiftiXML2(XmlWriter &amp;xml) const (function) of class cifti::VolumeSpace is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:48: warning: Member ENDIAN (enumeration) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:73: warning: Member getCiftiXML() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:74: warning: Member isInMemory() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:78: warning: Member getDimensions() const (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:89: warning: Member setCiftiXML(const CiftiXML &amp;xml, const bool useOldMetadata=true) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:90: warning: Member setRow(const float *dataIn, const std::vector&lt; int64_t &gt; &amp;indexSelect) (function) of class cifti::CiftiFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &amp;index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:114: warning: Member setRow(const float *dataIn, const std::vector&lt; int64_t &gt; &amp;indexSelect)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:115: warning: Member setColumn(const float *dataIn, const int64_t &amp;index)=0 (function) of class cifti::CiftiFile::WriteImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:105: warning: Member getRow(float *dataOut, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:106: warning: Member getColumn(float *dataOut, const int64_t &amp;index) const =0 (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/CiftiFile.h:107: warning: Member isInMemory() const (function) of class cifti::CiftiFile::ReadImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:103: warning: Member open(const AString &amp;filename, const BinaryFile::OpenMode &amp;opmode) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:104: warning: Member close() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:105: warning: Member seek(const int64_t &amp;position) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:106: warning: Member pos() (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:107: warning: Member read(void *dataOut, const int64_t &amp;count, int64_t *numRead) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.cxx:108: warning: Member write(const void *dataIn, const int64_t &amp;count) (function) of class cifti::StrFileImpl is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:43: warning: Member OpenMode (enumeration) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:56: warning: Member open(const AString &amp;filename, const OpenMode &amp;opmode=READ) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:57: warning: Member close() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:58: warning: Member getFilename() const (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:59: warning: Member getOpenForRead() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:60: warning: Member getOpenForWrite() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:61: warning: Member seek(const int64_t &amp;position) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:62: warning: Member pos() (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:63: warning: Member read(void *dataOut, const int64_t &amp;count, int64_t *numRead=NULL) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:64: warning: Member write(const void *dataIn, const int64_t &amp;count) (function) of class cifti::BinaryFile is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:70: warning: Member open(const AString &amp;filename, const OpenMode &amp;opmode)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:71: warning: Member close()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:72: warning: Member getFilename() const (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:73: warning: Member seek(const int64_t &amp;position)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:74: warning: Member pos()=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:75: warning: Member read(void *dataOut, const int64_t &amp;count, int64_t *numRead)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:76: warning: Member write(const void *dataIn, const int64_t &amp;count)=0 (function) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/BinaryFile.h:68: warning: Member m_fileName (variable) of class cifti::BinaryFile::ImplInterface is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:43: warning: Member swap(T &amp;toSwap) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:46: warning: Member swapArray(T *toSwap, const uint64_t &amp;count) (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/ByteSwapping.h:48: warning: Member isBigEndian() (function) of class cifti::ByteSwapping is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:110: warning: Member end() (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:111: warning: Member end() const (function) of class cifti::CompactLookup is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:83: warning: Member operator==(const const_iterator &amp;rhs) const (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:90: warning: Member operator*() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:96: warning: Member operator-&gt;() (function) of class cifti::CompactLookup::const_iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:55: warning: Member operator==(const iterator &amp;rhs) const (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:62: warning: Member operator*() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/CompactLookup.h:68: warning: Member operator-&gt;() (function) of class cifti::CompactLookup::iterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:42: warning: Member ConstFloatMatrixRowRef(const ConstFloatMatrixRowRef &amp;right) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:43: warning: Member ConstFloatMatrixRowRef(const std::vector&lt; float &gt; &amp;therow) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:44: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::ConstFloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:53: warning: Member FloatMatrixRowRef(FloatMatrixRowRef &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:54: warning: Member FloatMatrixRowRef(std::vector&lt; float &gt; &amp;therow) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:55: warning: Member operator=(const FloatMatrixRowRef &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:56: warning: Member operator=(const ConstFloatMatrixRowRef &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:57: warning: Member operator=(const float &amp;right) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:58: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::FloatMatrixRowRef is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:73: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::FloatMatrix is not documented.

/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:74: warning: Member operator[](const int64_t &amp;index) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:75: warning: Member operator+=(const FloatMatrix &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:76: warning: Member operator-=(const FloatMatrix &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:77: warning: Member operator*=(const FloatMatrix &amp;right) (function) of class cifti::FloatMatrix is not documented.
generating indices... /casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:78: warning: Member operator+=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:79: warning: Member operator-=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:80: warning: Member operator*=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:81: warning: Member operator/=(const float &amp;right) (function) of class cifti::FloatMatrix is not documented.
genindex /casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:82: warning: Member operator+(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:83: warning: Member operator-(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:84: warning: Member operator-() const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:85: warning: Member operator*(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:86: warning: Member operator==(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/FloatMatrix.h:87: warning: Member operator!=(const FloatMatrix &amp;right) const (function) of class cifti::FloatMatrix is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:131: warning: Member addVectors(const float v1[3], const float v2[3], float resultOut[3]) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:261: warning: Member isNaN(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:263: warning: Member isPosInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:265: warning: Member isNegInf(const float number) (function) of class cifti::MathFunctions is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:227: warning: The following parameter of cifti::MathFunctions::arraysEqual(const float a[], const float b[], const int32_t numElements) is not documented:
  parameter 'numElements'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:273: warning: The following parameter of cifti::MathFunctions::compareArrays(const float a1[], const float a2[], const int32_t numElements, const float tolerance) is not documented:
  parameter 'numElements'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'X' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'Y' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:1324: warning: argument 'coordinate' of command @param is not found in the argument list of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2)
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:121: warning: The following parameters of cifti::MathFunctions::distanceSquared2D(const double x1, const double y1, const double x2, const double y2) are not documented:
  parameter 'x1'
  parameter 'y1'
  parameter 'x2'
  parameter 'y2'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:79: warning: The following parameter of cifti::MathFunctions::normalizedCrossProduct(const float x1[], const float x2[], float resultOut[]) is not documented:
  parameter 'resultOut'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:352: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(double vector[3])
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:90: warning: The following parameter of cifti::MathFunctions::normalizeVector(double vector[3]) is not documented:
  parameter 'vector'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.cxx:333: warning: argument 'vectorInOut' of command @param is not found in the argument list of cifti::MathFunctions::normalizeVector(float vector[3])
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:88: warning: The following parameter of cifti::MathFunctions::normalizeVector(float vector[3]) is not documented:
  parameter 'vector'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MathFunctions.h:63: warning: The following parameter of cifti::MathFunctions::normalVectorDirection(const float v1[3], const float v2[3], const float v3[3], float directionOut[3]) is not documented:
  parameter 'directionOut'
done
highlighting module code... 
writing additional pages... search QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-a-sac-ns-brainvisa'
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:47: warning: Member getDimensions() const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:49: warning: Member resize(const std::vector&lt; I &gt; &amp;dims) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:51: warning: Member at(const std::vector&lt; I &gt; &amp;pos) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:53: warning: Member at(const std::vector&lt; I &gt; &amp;pos) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:55: warning: Member get(const int &amp;fullDims, const std::vector&lt; I &gt; &amp;indexSelect) (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimArray.h:57: warning: Member get(const int &amp;fullDims, const std::vector&lt; I &gt; &amp;indexSelect) const (function) of class cifti::MultiDimArray is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:45: warning: Member MultiDimIterator(const std::vector&lt; T &gt; &amp;dimensions) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:46: warning: Member operator++() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:47: warning: Member operator++(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:48: warning: Member operator--() (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:49: warning: Member operator--(int) (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:50: warning: Member operator*() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/MultiDimIterator.h:51: warning: Member atEnd() const (function) of class cifti::MultiDimIterator is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:41: warning: Member dot(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:42: warning: Member cross(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:43: warning: Member normal(float *origLength=NULL) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:44: warning: Member length() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:45: warning: Member lengthsquared() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:48: warning: Member Vector3D(const float &amp;x, const float &amp;y, const float &amp;z) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:49: warning: Member Vector3D(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:51: warning: Member operator[](const int64_t &amp;index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:52: warning: Member operator[](const int64_t &amp;index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:53: warning: Member operator[](const int32_t &amp;index) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:54: warning: Member operator[](const int32_t &amp;index) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:55: warning: Member operator=(const float *right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:57: warning: Member operator+=(const Vector3D &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:58: warning: Member operator-=(const Vector3D &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:59: warning: Member operator*=(const float &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:60: warning: Member operator/=(const float &amp;right) (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:61: warning: Member operator+(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:62: warning: Member operator-(const Vector3D &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:63: warning: Member operator-() const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:64: warning: Member operator*(const float &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:65: warning: Member operator/(const float &amp;right) const (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/Vector3D.h:66: warning: Member operator float *() (function) of class cifti::Vector3D is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:39: warning: Member VoxelIJK(int64_t i, int64_t j, int64_t k) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:41: warning: Member VoxelIJK(const T ijk[3]) (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:46: warning: Member operator&lt;(const VoxelIJK &amp;rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:54: warning: Member operator==(const VoxelIJK &amp;rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:60: warning: Member operator!=(const VoxelIJK &amp;rhs) const (function) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/VoxelIJK.h:37: warning: Member m_ijk[3] (variable) of struct cifti::VoxelIJK is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:155: warning: Member mandatoryVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:156: warning: Member optionalVals (variable) of struct cifti::XmlAttributesResult is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:152: warning: Member present (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Common/XmlAdapter.h:153: warning: Member value (variable) of struct cifti::XmlAttributesResult::OptionalStatus is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/nifti1.h:306: warning: Member extension[4] (variable) of struct cifti::nifti1_extender is not documented.
done
copying images... [ 50%] ../sphinxman/images/anatomist.png
copying images... [100%] ../sphinxman/images/program.png

copying static files... /casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:44: warning: Member m_ecode (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:45: warning: Member m_bytes (variable) of struct cifti::NiftiExtension is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:53: warning: Member read(BinaryFile &amp;inFile) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:54: warning: Member write(BinaryFile &amp;outFile, const int &amp;version=1, const bool &amp;swapEndian=false) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:55: warning: Member canWriteVersion(const int &amp;version) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:56: warning: Member isSwapped() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:57: warning: Member version() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:59: warning: Member getDimensions() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:60: warning: Member getSForm() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:61: warning: Member getDataOffset() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:62: warning: Member getDataType() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:63: warning: Member getIntentCode() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:64: warning: Member getIntentName() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:65: warning: Member getDataScaling(double &amp;mult, double &amp;offset) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:66: warning: Member toString() const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:68: warning: Member setDimensions(const std::vector&lt; int64_t &gt; &amp;dimsIn) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:69: warning: Member setSForm(const std::vector&lt; std::vector&lt; float &gt; &gt; &amp;sForm) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:70: warning: Member setIntent(const int32_t &amp;code, const char name[16]) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:71: warning: Member setDataType(const int16_t &amp;type) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:72: warning: Member clearDataScaling() (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:73: warning: Member setDataScaling(const double &amp;mult, const double &amp;offset) (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:77: warning: Member operator==(const NiftiHeader &amp;rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:78: warning: Member operator!=(const NiftiHeader &amp;rhs) const (function) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/Nifti/NiftiHeader.h:50: warning: Member m_extensions (variable) of struct cifti::NiftiHeader is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:62: warning: Member openRead(const AString &amp;filename) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:63: warning: Member writeNew(const AString &amp;filename, const NiftiHeader &amp;header, const int &amp;version=1, const bool &amp;withRead=false, const bool &amp;swapEndian=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:64: warning: Member getFilename() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:65: warning: Member overrideDimensions(const std::vector&lt; int64_t &gt; &amp;newDims) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:66: warning: Member close() (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:67: warning: Member getHeader() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:68: warning: Member getDimensions() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:69: warning: Member getNumComponents() const (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:73: warning: Member readData(T *dataOut, const int &amp;fullDims, const std::vector&lt; int64_t &gt; &amp;indexSelect, const bool &amp;tolerateShortRead=false) (function) of class cifti::NiftiIO is not documented.
/casa/host/src/aims/aims-free/5.1/aimsgui/src/CiftiLib-1.5.1/src/NiftiIO.h:75: warning: Member writeData(const T *dataIn, const int &amp;fullDims, const std::vector&lt; int64_t &gt; &amp;indexSelect) (function) of class cifti::NiftiIO is not documented.
Starting Anatomist.....
[ 26%] Built target bv_env
done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.

The HTML pages are in ../../share/doc/anatomist-5.1/dev_doc.
[ 26%] Built target aims-free_target_13

/casa/host/build/python/soma/controller/controller.py:docstring of soma.controller.controller.Controller.add_trait:1: WARNING: duplicate object description of soma.controller.controller.Controller.add_trait, other instance in api, use :noindex: for one of them
/casa/host/build/python/soma/controller/controller.py:docstring of soma.controller.controller.Controller.is_user_trait:1: WARNING: duplicate object description of soma.controller.controller.Controller.is_user_trait, other instance in api, use :noindex: for one of them
/casa/host/build/python/soma/controller/controller.py:docstring of soma.controller.controller.Controller.remove_trait:1: WARNING: duplicate object description of soma.controller.controller.Controller.remove_trait, other instance in api, use :noindex: for one of them
/casa/host/build/python/soma/controller/controller.py:docstring of soma.controller.controller.Controller.user_traits:1: WARNING: duplicate object description of soma.controller.controller.Controller.user_traits, other instance in api, use :noindex: for one of them
/casa/host/build/python/soma/fom.py:docstring of soma.fom.AttributesToPaths.allowed_extensions_for_parameter:5: ERROR: Unexpected indentation.
/casa/host/build/python/soma/fom.py:docstring of soma.fom.AttributesToPaths.allowed_extensions_for_parameter:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/mpfork.py:docstring of soma.mpfork.worker:4: ERROR: Unexpected indentation.
/casa/host/build/python/soma/mpfork.py:docstring of soma.mpfork.worker:5: WARNING: Block quote ends without a blank line; unexpected unindent.
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done
[ 26%] Built target aims-free_target_12
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
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done
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[autosummary] generating autosummary for: capsul.rst, developer_manual.rst, index.rst, python.rst, python_bv_configuration.rst, python_bv_data.rst, python_bv_data_gui.rst, python_bv_processing.rst, python_bv_processing_gui.rst, python_bv_tools.rst, usecases.rst, usecases_nb.ipynb
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/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:16,633::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
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[autosummary] generating autosummary for: index.rst, pyaims_aimsalgo.rst, pyaims_aimsalgo_examples.rst, pyaims_algo.rst, pyaims_api_aims.rst, pyaims_api_aimsalgo.rst, pyaims_examples.rst, pyaims_examples_advanced.rst, pyaims_highlevel.rst, pyaims_lowlevel.rst, pyaims_modules_api.rst, pyaims_tutorial.rst, pyaims_tutorial_nb.ipynb
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py-modindex done
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done
copying static files... Consolidate compiler generated dependencies of target cartobase_1
done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.

The HTML pages are in ../../share/doc/morphologist-ui-5.1/dev_doc.
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[ 40%] Built target cartobase_1
Doxygen version used: 1.9.1
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Failed to import soma.aims.diff.
Possible hints:
* ModuleNotFoundError: No module named 'soma.aims.diff'
* AttributeError: module 'soma.aims' has no attribute 'diff'
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Parsing file /casa/Consolidate compiler generated dependencies of target graph
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:17,622::INFO::Pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.png'.
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Parsing file /casa/host/build/include/aims/io/ecatR.h...
Preprocessing /casa/host/build/include/aims/io/ecatSinoheader.h...
Parsing file /casa/host/build/include/aims/io/ecatSinoheader.h...
Preprocessing /casa/host/build/include/aims/io/ecatSinoR.h...
Parsing file /casa/host/build/include/aims/io/ecatSinoR.h...
Preprocessing /casa/host/build/include/aims/io/ecatSinoW.h...
Parsing file /casa/host/build/include/aims/io/ecatSinoW.h...
Preprocessing /casa/host/build/include/aims/io/ecatW.h...
Parsing file /casa/host/build/include/aims/io/ecatW.h...
Preprocessing /casa/host/build/include/aims/io/ecatfinderformat.h...
Parsing file /casa/host/build/include/aims/io/ecatfinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/ecatplugin.h...
Parsing file /casa/host/build/include/aims/plugin/ecatplugin.h...
Preprocessing /casa/host/build/include/aims/sino/sino.h...
Parsing file /casa/host/build/include/aims/sino/sino.h...
Preprocessing /casa/host/build/include/aims/sino/sino_d.h...
Parsing file /casa/host/build/include/aims/sino/sino_d.h...
Preprocessing /casa/host/build/include/aims/io/vidafinderformat.h...
Parsing file /casa/host/build/include/aims/io/vidafinderformat.h...
Preprocessing /casa/host/build/include/aims/io/vidaformat.h...
Parsing file /casa/host/build/include/aims/io/vidaformat.h...
Preprocessing /casa/host/build/include/aims/io/vidaformat_d.h...
Parsing file /casa/host/build/include/aims/io/vidaformat_d.h...
Preprocessing /casa/host/build/include/aims/io/vidaheader.h...
Parsing file /casa/host/build/include/aims/io/vidaheader.h...
Preprocessing /casa/host/build/include/aims/io/vidaR.h...
Parsing file /casa/host/build/include/aims/io/vidaR.h...
Preprocessing /casa/host/build/include/aims/io/vidaW.h...
Parsing file /casa/host/build/include/aims/io/vidaW.h...
Preprocessing /casa/host/build/include/aims/plugin/vidaplugin.h...
Parsing file /casa/host/build/include/aims/plugin/vidaplugin.h...
Preprocessing /casa/host/build/include/aims/io/plyformat.h...
Parsing file /casa/host/build/include/aims/io/plyformat.h...
Preprocessing /casa/host/build/include/aims/io/plyformat_d.h...
Parsing file /casa/host/build/include/aims/io/plyformat_d.h...
Preprocessing /casa/host/build/include/aims/io/plyheader.h...
Parsing file /casa/host/build/include/aims/io/plyheader.h...
Preprocessing /casa/host/build/include/aims/io/plyr.h...
Parsing file /casa/host/build/include/aims/io/plyr.h...
Preprocessing /casa/host/build/include/aims/io/plyw.h...
Parsing file /casa/host/build/include/aims/io/plyw.h...
Preprocessing /casa/host/build/include/aims/io/plyfinderformat.h...
Parsing file /casa/host/build/include/aims/io/plyfinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/plyplugin.h...
Parsing file /casa/host/build/include/aims/plugin/plyplugin.h...
Preprocessing /casa/host/build/include/aims/rply/rply.h...
Parsing file /casa/host/build/include/aims/rply/rply.h...
Preprocessing /casa/host/build/include/aims/io/fdfformat.h...
Parsing file /casa/host/build/include/aims/io/fdfformat.h...
Preprocessing /casa/host/build/include/aims/io/fdfformat_d.h...
Parsing file /casa/host/build/include/aims/io/fdfformat_d.h...
Preprocessing /casa/host/build/include/aims/io/fdfheader.h...
Parsing file /casa/host/build/include/aims/io/fdfheader.h...
Preprocessing /casa/host/build/include/aims/io/fdfR.h...
Parsing file /casa/host/build/include/aims/io/fdfR.h...
Preprocessing /casa/host/build/include/aims/io/fdffinderformat.h...
Parsing file /casa/host/build/include/aims/io/fdffinderformat.h...
Preprocessing /casa/host/build/include/aims/io/fdfprocpar.h...
Parsing file/casa/host/build/include/aims/utility/anytype_reader_details.h:36: warning: the name 'Belongs' supplied as the argument in the \file statement is not an input file
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:17,670::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMNormalization.png'.
/casa/host/build/share/doc/cartobase-5.1/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
/casa/host/build/include/aims/data/cartodatavolume.h:60: warning: the name 'more' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
/casa/host/build/include/aims/data/cartodatavolume.h:62: warning: the name 'classes' supplied as the argument of the \class, \struct, \union, or \include command is not an input file
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:17,705::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.png'.
 /casa/host/build/include/aims/io/fdfprocpar.h...
Preprocessing /casa/host/build/include/aims/io/fdfprocpar_g.h...
Parsing file /casa/host/build/include/aims/io/fdfprocpar_g.h...
Preprocessing /casa/host/build/include/aims/io/fdfutil.h...
Parsing file /casa/host/build/include/aims/io/fdfutil.h...
Preprocessing /casa/host/build/include/aims/plugin/fdfplugin.h...
Parsing file /casa/host/build/include/aims/plugin/fdfplugin.h...
Preprocessing /casa/host/build/include/aims/io/jpegformat.h...
Parsing file /casa/host/build/include/aims/io/jpegformat.h...
Preprocessing /casa/host/build/include/aims/io/jpegformat_d.h...
Parsing file /casa/host/build/include/aims/io/jpegformat_d.h...
Preprocessing /casa/host/build/include/aims/io/jpegheader.h...
Parsing file /casa/host/build/include/aims/io/jpegheader.h...
Preprocessing /casa/host/build/include/aims/io/jpegR.h...
Parsing file /casa/host/build/include/aims/io/jpegR.h...
Preprocessing /casa/host/build/include/aims/io/jpegW.h...
Parsing file /casa/host/build/include/aims/io/jpegW.h...
Preprocessing /casa/host/build/include/aims/io/jpegfinderformat.h...
Parsing file /casa/host/build/include/aims/io/jpegfinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/jpegplugin.h...
Parsing file /casa/host/build/include/aims/plugin/jpegplugin.h...
Preprocessing /casa/host/build/include/aims/io/tiffformat.h...
Parsing file /casa/host/build/include/aims/io/tiffformat.h...
Preprocessing /casa/host/build/include/aims/io/tiffformat_d.h...
Parsing file /casa/host/build/include/aims/io/tiffformat_d.h...
Preprocessing /casa/host/build/include/aims/io/tiffheader.h...
Parsing file /casa/host/build/include/aims/io/tiffheader.h...
Preprocessing /casa/host/build/include/aims/io/tiffR.h...
Parsing file /casa/host/build/include/aims/io/tiffR.h...
Preprocessing /casa/host/build/include/aims/io/tiffW.h...
Parsing file /casa/host/build/include/aims/io/tiffW.h...
Preprocessing /casa/host/build/include/aims/io/tifffinderformat.h...
Parsing file /casa/host/build/include/aims/io/tifffinderformat.h...
Preprocessing /casa/host/build/include/aims/plugin/tiffplugin.h...
Parsing file /casa/host/build/include/aims/plugin/tiffplugin.h...
Preprocessing /casa/host/build/include/aims/io/gifti.h...
Parsing file /casa/host/build/include/aims/io/gifti.h...
Preprocessing /casa/host/build/include/aims/io/giftiformat.h...
Parsing file /casa/host/build/include/aims/io/giftiformat.h...
Preprocessing /casa/host/build/include/aims/io/giftimeshformat_d.h...
Parsing file /casa/host/build/include/aims/io/giftimeshformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftitextureformat_d.h...
Parsing file /casa/host/build/include/aims/io/giftitextureformat_d.h...
Preprocessing /casa/host/build/include/aims/io/giftiheader.h...
Parsing file /casa/host/build/include/aims/io/giftiheader.h...
Preprocessing /casa/host/build/include/aims/io/giftifinderformat.h...
Parsing file /casa/host/build/include/aims/io/giftifinderformat.h...
Preprocessing /casa/host/build/include/aims/io/giftiutil.h...
Parsing file /casa/host/build/include/aims/io/giftiutil.h...
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Parsing file /casa/host/build/include/aims/plugin/giftiplugin.h...
Preprocessing /casa/host/build/include/aims/config/config.h...
Parsing file /casa/host/build/include/aims/config/config.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
CompuConsolidate compiler generated dependencies of target aimsdata
/casa/host/build/include/aims/border/borderiterator.h:290: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::const_iterator &amp;other)
Possible candidates:
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const const_iterator &amp;other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const iterator &amp;other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, const Point4dl &amp;current)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:297: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::iterator &amp;other)
Possible candidates:
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator()' at line 132 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const const_iterator &amp;other)' at line 134 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(const iterator &amp;other)' at line 136 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, bool end=false)' at line 140 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::const_iterator::const_iterator(BorderIterator&lt; T &gt; &amp;b, const Point4dl &amp;current)' at line 142 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:304: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  BorderIterator&lt; T &gt;::const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::const_iterator &amp;other)
Possible candidates:
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const const_iterator &amp;other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const iterator &amp;other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:313: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  BorderIterator&lt; T &gt;::const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::iterator &amp;other)
Possible candidates:
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const const_iterator &amp;other)' at line 147 of file /casa/host/build/include/aims/border/borderiterator.h
  'const_iterator &amp; aims::BorderIterator&lt; T &gt;::const_iterator::operator=(const iterator &amp;other)' at line 149 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/border/borderiterator.h:552: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  aims::BorderIterator&lt; T &gt;::iterator::iterator(const typename aims::BorderIterator&lt; T &gt;::aims::BorderIterator::iterator &amp;other)
Possible candidates:
  'aims::BorderIterator&lt; T &gt;::iterator::iterator()' at line 213 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::iterator::iterator(const iterator &amp;other)' at line 215 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::iterator::iterator(BorderIterator&lt; T &gt; &amp;b, bool end=false)' at line 219 of file /casa/host/build/include/aims/border/borderiterator.h
  'aims::BorderIterator&lt; T &gt;::iterator::iterator(BorderIterator&lt; T &gt; &amp;b, const Point4dl &amp;current)' at line 221 of file /casa/host/build/include/aims/border/borderiterator.h

/casa/host/build/include/aims/connectivity/structuring_element.h:94: warning: no uniquely matching class member found for 
  iterator over Point3dl of the aims::StructuringElement::aims::StructuringElement

/casa/host/build/include/aims/connectivity/structuring_element.h:96: warning: documented symbol 'const_iterator over Point3dl of aims::StructuringElement::the' was not declared or defined.
/casa/host/build/include/aims/connectivity/structuring_element.h:381: warning: documented symbol 'bool matrix x3x3 elements that describe a aims::strel::Connectivity::D' was not declared or defined.
/casa/host/build/include/aims/data/cartodatavolume.h:761: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::reference AimsData&lt; T &gt;::operator[](AimsData&lt; T &gt;::size_t n)
Possible candidates:
  'reference AimsData&lt; T &gt;::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/cartodatavolume.h:770: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::const_reference AimsData&lt; T &gt;::operator[](AimsData&lt; T &gt;::size_t n) const
Possible candidates:
  'reference AimsData&lt; T &gt;::operator[](size_type n)' at line 145 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator[](size_type n) const' at line 146 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/cartodatavolume.h:779: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::reference AimsData&lt; T &gt;::operator()(AimsData&lt; T &gt;::size_t x, AimsData&lt; T &gt;::size_type y, AimsData&lt; T &gt;::size_type z, AimsData&lt; T &gt;::size_type t)
Possible candidates:
  'reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/cartodatavolume.h:789: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  AimsData&lt; T &gt;::const_reference AimsData&lt; T &gt;::operator()(AimsData&lt; T &gt;::size_t x, AimsData&lt; T &gt;::size_type y, AimsData&lt; T &gt;::size_type z, AimsData&lt; T &gt;::size_type t) const
Possible candidates:
  'reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0)' at line 147 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(size_type x=0, size_type y=0, size_type z=0, size_type t=0) const' at line 149 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt)' at line 151 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4d &amp;pt) const' at line 152 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt)' at line 153 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point4dl &amp;pt) const' at line 154 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt)' at line 155 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3d &amp;pt) const' at line 156 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt)' at line 157 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point3dl &amp;pt) const' at line 158 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt)' at line 159 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2d &amp;pt) const' at line 160 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt)' at line 161 of file /casa/host/build/include/aims/data/cartodatavolume.h
  'const_reference AimsData&lt; T &gt;::operator()(const Point2dl &amp;pt) const' at line 162 of file /casa/host/build/include/aims/data/cartodatavolume.h

/casa/host/build/include/aims/data/fastAllocationData.h:111: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  const carto::AllocatorContext AimsFastAllocationData&lt; T &gt;::fastAllocatorContext &amp; aims::carto::MemoryAllocator::singleton()

/casa/host/build/include/aims/data/pheader.h:101: warning: no uniquely matching class member found for 
  template 
  Object carto::Object::value(const aims::PythonHeader &amp;v)
Possible candidates:
  'Object carto::Object::value(const Object &amp;value)' at line 1 of file /casa/host/build/share/doc/cartobase-5.1/doxygen/cartobase.tag
  'static Object carto::Object::value()' at line 1 of file /casa/host/build/share/doc/cartobase-5.1/doxygen/cartobase.tag
  'static Object carto::Object::value(const T &amp;)' at line 1 of file /casa/host/build/share/doc/cartobase-5.1/doxygen/cartobase.tag

Could not use Matplotlib: &lt;class 'ImportError'&gt; Cannot load backend 'Qt5Agg' which requires the 'qt' interactive framework, as 'headless' is currently running
Failed to import brainvisa.data.ftpDirectory.
Possible hints:
* AttributeError: module 'brainvisa.data' has no attribute 'ftpDirectory'
* ModuleNotFoundError: No module named 'cStringIO'
Failed to import brainvisa.data.virtualDirectory.
Possible hints:
* AttributeError: module 'brainvisa.data' has no attribute 'virtualDirectory'
* ModuleNotFoundError: No module named 'cStringIO'
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 12 source files that are out of date
updating environment: 0 added, 6 changed, 0 removed
reading sources... [ 16%] python
/casa/host/build/include/aims/utility/channel.h:122: warning: no uniquely matching class member found for 
  template &lt; T, U, C &gt;
  U ChannelSelector::select(const T &amp;input, const uint8_t)

/casa/host/build/include/aims/utility/channel.h:128: warning: no uniquely matching class member found for 
  template &lt; T, U, C &gt;
  void ChannelSelector::set(T &amp;input, const uint8_t, const U &amp;value)

/casa/host/build/include/aims/utility/channel.h:134: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  U ChannelSelector::select(const AimsRGB &amp;input, const uint8_t channel)

/casa/host/build/include/aims/utility/channel.h:155: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  void ChannelSelector::set(AimsRGB &amp;input, const uint8_t channel, const U &amp;value)

/casa/host/build/include/aims/utility/channel.h:171: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  U ChannelSelector::select(const AimsRGBA &amp;input, const uint8_t channel)

/casa/host/build/include/aims/utility/channel.h:196: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  void ChannelSelector::set(AimsRGBA &amp;input, const uint8_t channel, const U &amp;value)

/casa/host/build/include/aims/utility/channel.h:215: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  U ChannelSelector::select(const AimsHSV &amp;input, const uint8_t channel)

/casa/host/build/include/aims/utility/channel.h:239: warning: no uniquely matching class member found for 
  template &lt; U &gt;
  void ChannelSelector::set(AimsHSV &amp;input, const uint8_t channel, const U &amp;value)

/casa/host/build/include/aims/utility/converter_bucket.h:260: warning: no uniquely matching class member found for 
  template &lt; INP, OUTP &gt;
  void carto::RawConverter&lt; INP, OUTP &gt;::printToVolume(const aims::BucketMap&lt; INP &gt; &amp;in, carto::rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &amp;out, const Point3d &amp;offset) const

/casa/host/build/include/aims/utility/converter_bucket.h:380: warning: no uniquely matching class member found for 
  template &lt; OUTP &gt;
  void carto::RawConverter&lt; OUTP &gt;::printToVolume(const aims::BucketMap&lt; Void &gt; &amp;in, carto::rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &amp;out, const Point3d &amp;offset) const

[ 53%] Built target aimsdata
Consolidate compiler generated dependencies of target DiscoFFDMetrics
Consolidate compiler generated dependencies of target AimsAverage
[ 53%] Built target DiscoFFDMetrics
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Consolidate compiler generated dependencies of target AimsChannelExtract
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Consolidate compiler generated dependencies of target AimsFileInfo
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/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsGraphMerge
Consolidate compiler generated dependencies of target AimsGraphConvert
Consolidate compiler generated dependencies of target AimsGraphExtractTransformation
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag &lt;region&gt; found
[ 53%] Built target AimsGraphMerge
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[ 53%] Built target AimsGraphExtractTransformation
Consolidate compiler generated dependencies of target AimsMassCenter
Consolidate compiler generated dependencies of target AimsInvertTransformation
/casa/host/build/include/aims/io/process.h:256: warning: included file AimsFileInfo/fileInfo.cc is not found. Check your EXAMPLE_PATH
Consolidate compiler generated dependencies of target AimsMerge2Rgb
[ 53%] Built target AimsInvertTransformation
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Consolidate compiler generated dependencies of target AimsMeshCut
Consolidate compiler generated dependencies of target AimsMeshArea
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[ 53%] Built target AimsMergeLabel
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[ 53%] Built target AimsMeshArea
Consolidate compiler generated dependencies of target AimsMeshes2Graph
Consolidate compiler generated dependencies of target AimsMeshGenerate
Consolidate compiler generated dependencies of target AimsMeshTransform
[ 53%] Built target AimsMeshes2Graph
[ 53%] Built target AimsMeshGenerate
[ 53%] Built target AimsMeshTransform
Consolidate compiler generated dependencies of target AimsOverVolume
Consolidate compiler generated dependencies of target AimsRemoveNaN
Consolidate compiler generated dependencies of target AimsRoiFeatures
[ 53%] Built target AimsRemoveNaN
[ 53%] Built target AimsOverVolume
ting class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating docs for example AimsFileInfo/fileInfo.cc...
Generating file sources...
Generating code for file aims/border/borderfiller.h...
Generating code for file aims/border/borderiterator.h...
Generating code for file aims/bucket/bucket.h...
Generating code for file aims/bucket/bucket_g.h...
Generating code for file aims/bucket/bucketgen.h...
Generating code for file aims/bucket/bucketMap.h...
Generating code for file aims/bucket/bucketutil.h...
Generating code for file aims/bucket/bucketutil_d.h...
Generating code for file aims/bucket/item.h...
Generating code for file aims/bucket/sparsevolume.h...
Generating code for file aims/color/colormap.h...
Generating code for file aims/config/aimsdata_config.h...
Generating code for file aims/config/config.h...
Generating code for file aims/connectivity/component.h...
Generating code for file aims/connectivity/component_d.h...
Generating code for file aims/connectivity/connectivity.h...
Generating code for file aims/connectivity/connectivity_g.h...
Generating code for file aims/connectivity/structuring_element.h...
Generating code for file aims/curve/curve.h...
Generating code for file aims/data/cartodatavolume.h...
Generating code for file aims/data/data.h...
Generating code for file aims/data/data_g.h...
Generating code for file aims/data/fastAllocationData.h...
Generating code for file aims/data/header.h...
Generating code for file aims/data/headerutil.h...
Generating code for file aims/data/pheader.h...
Generating code for file aims/data/pheader_doc.h...
Generating code for file aims/data/sliceformatheader.h...
Generating code for file aims/data/volumemanip.h...
Generating code for file aims/data/volumeoperators_aims.h...
Generating code for file aims/def/assert.h...
Generating code for file aims/def/def_g.h...
Generating code for file aims/def/general.h...
Generating code for file aims/def/info.h...
Generating code for file aims/def/path.h...
Generating code for file aims/def/settings.h...
Generating code for file aims/doc/aimsdata_doc.h...
Generating code for file aims/features/features.h...
Generating code for file aims/features/point_set_features.h...
Generating code for file aims/features/roi_features.h...
Generating code for file aims/features/scalar_set_features.h...
Generating code for file aims/fibers/bundleRegroup.h...
Generating code for file aims/fibers/bundles.h...
Generating code for file aims/fibers/bundles_features.h...
Generating code for file aims/fibers/bundleSampler.h...
Generating code for file aims/fibers/bundlesFusion.h...
Generating code for file aims/fibers/bundlesSlicer.h...
Generating code for file aims/fibers/fiberOversampler.h...
Generating code for file aims/fibers/mrtrixbundlereader.h...
Generating code for file aims/fibers/trackvisbundlereader.h...
Generating code for file aims/getopt/getopt2.h...
Generating code for file aims/getopt/getoptProcess.h...
Generating code for file aims/graph/graphmanip.h...
Generating code for file aims/graph/graphmanip_d.h...
Generating code for file aims/hsv/hsv.h...
GeneConsolidate compiler generated dependencies of target AimsSelectLabel
Consolidate compiler generated dependencies of target AimsSetMinf
[ 53%] Built target AimsRoiFeatures
[ 53%] Built target AimsSelectLabel
[ 53%] Built target AimsSetMinf
Consolidate compiler generated dependencies of target AimsSplitRgb
Consolidate compiler generated dependencies of target AimsSubVolume
Consolidate compiler generated dependencies of target AimsSumSparseMatrix
[ 53%] Built target AimsSplitRgb
global modules: /casa/host/build/build_files/anatomist-gpl/pyanatomist/../../../share/anatomist-5.1/python_plugins
home   modules: /casa/home/.anatomist/python_plugins
loading module ana_image_math
loading module gradientpalette
loading module foldsplit
loading module meshsplit
loading module save_resampled
loading module bsa_proba
loading module paletteViewer
loading module palettecontrols
loading module anacontrolmenu
loading module bundles_split_by_cortical_regions
loading module modelGraphs
loading module gltf_io
loading module simple_controls
loading module profilewindow
loading module volumepalettes
loading module selection
loading module histogram
loading module bundles_small_brains
all python modules loaded
Anatomist started.
Using Sphinx-Gallery to convert rst text blocks to markdown for .ipynb files.
loading pickled environment... [ 53%] Built target AimsSubVolume
[ 53%] Built target AimsSumSparseMatrix
Consolidate compiler generated dependencies of target AimsTCat
Consolidate compiler generated dependencies of target AimsTex2Graph
Consolidate compiler generated dependencies of target AimsTex2Vol
[ 53%] Built target AimsTCat
[ 53%] Built target AimsTex2Graph
[ 53%] Built target AimsTex2Vol
Consolidate compiler generated dependencies of target AimsThreshold
Consolidate compiler generated dependencies of target AimsVectorFieldToMesh
Consolidate compiler generated dependencies of target AimsVolumeExtract
[ 53%] Built target AimsThreshold
[ 53%] Built target AimsVectorFieldToMesh
rating code for file aims/io/aimsGraphR.h...
Generating code for file aims/io/aimsGraphR_d.h...
Generating code for file aims/io/aimsGraphW.h...
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Generating code for file aims/io/apcreader.h...
Generating code for file aims/io/argheader.h...
Generating code for file aims/io/argR.h...
Generating code for file aims/io/argW.h...
Generating code for file aims/io/baseFormats_bucket.h...
Generating code for file aims/io/baseFormats_bucket_d.h...
Generating code for file aims/io/baseFormats_cartovolume.h...
Generating code for file aims/io/baseFormats_genericobject.h...
Generating code for file aims/io/baseFormats_graph.h...
Generating code for file aims/io/baseFormats_hierarchy.h...
Generating code for file aims/io/baseFormats_mesh.h...
Generating code for file aims/io/baseFormats_mesh_d.h...
Generating code for file aims/io/baseFormats_sparsematrix.h...
Generating code for file aims/io/baseFormats_syntax.h...
Generating code for file aims/io/baseFormats_texture.h...
Generating code for file aims/io/baseFormats_texture_d.h...
Generating code for file aims/io/baseFormats_volume.h...
Generating code for file aims/io/baseFormats_volume_d.h...
Generating code for file aims/io/bckheader.h...
Generating code for file aims/io/bckItemR.h...
Generating code for file aims/io/bckItemW.h...
Generating code for file aims/io/bckMapR.h...
Generating code for file aims/io/bckMapW.h...
Generating code for file aims/io/bckR.h...
Generating code for file aims/io/bckW.h...
Generating code for file aims/io/byteswap.h...
Generating code for file aims/io/channelR.h...
Generating code for file aims/io/cmapR.h...
Generating code for file aims/io/cmapW.h...
Generating code for file aims/io/coarseR.h...
Generating code for file aims/io/datatypecode.h...
Generating code for file aims/io/dbh.h...
Generating code for file aims/io/defaultItemR.h...
Generating code for file aims/io/defaultItemW.h...
Generating code for file aims/io/directory.h...
Generating code for file aims/io/dtitensorItemR.h...
Generating code for file aims/io/dtitensorItemW.h...
Generating code for file aims/io/ecatfinderformat.h...
Generating code for file aims/io/ecatformat.h...
Generating code for file aims/io/ecatformat_d.h...
Generating code for file aims/io/ecatheader.h...
Generating code for file aims/io/ecatR.h...
Generating code for file aims/io/ecatSinoheader.h...
Generating code for file aims/io/ecatSinoR.h...
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Generating code for file aims/io/ecatW.h...
Generating code for file aims/io/fdffinderformat.h...
Generating code for file aims/io/fdfformat.h...
Generating code for file aims/io/fdfformat_d.h...
Generating code for file aims/io/fdfheader.h...
Generating code for file aims/io/fdfprocpar.h...
Generating code for file aims/io/fdfprocpar_g.h...
Generating code for file aims/io/fdfR.h...
Generating code for file aims/io/fdfutil.h...
Generating code for file aims/io/fileFormat.h...
Generating code for file aims/io/fileFormat_cartovolume_d.h...
Generating code for file aims/io/fileFormat_d.h...
Generating code for file aims/io/finder.h...
Generating code for file aims/io/finderFormats.h...
Generating code for file aims/io/ge_imageFileOffsets.h...
Generating code for file aims/io/ge_imghdr.h...
Generating code for file aims/io/genesisheader.h...
Generating code for file aims/io/genesisR.h...
Generating code for file aims/io/gifti.h...
Generating code for file aims/io/giftifinderformat.h...
Generating code for file aims/io/giftiformat.h...
Generating code for file aims/io/giftiheader.h...
Generating code for file aims/io/giftimeshformat_d.h...
Generating code for file aims/io/giftitextureformat_d.h...
Generating code for file aims/io/giftiutil.h...
Generating code for file aims/io/graphBundlesFormat.h...
Generating code for file aims/io/hieR.h...
Generating code for file aims/io/imasparseheader.h...
Generating code for file aims/io/io_g.h...
Generating code for file aims/io/iooptions.h...
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Generating code for file aims/io/itemR_stl.h...
Ge[ 53%] Built target AimsVolumeExtract
Consolidate compiler generated dependencies of target aimstiff
Consolidate compiler generated dependencies of target AimsBundle2Vol
Consolidate compiler generated dependencies of target AimsBundleAnalysis
[ 53%] Built target aimstiff
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[ 53%] Built target AimsBundleAnalysis
Consolidate compiler generated dependencies of target aimsecat
Consolidate compiler generated dependencies of target aimsgui
[ 53%] Built target aimsecat
[ 53%] Built target aimsgui
nerating code for file aims/io/itemW.h...
Generating code for file aims/io/itemW_stl.h...
Generating code for file aims/io/jpegfinderformat.h...
Generating code for file aims/io/jpegformat.h...
Generating code for file aims/io/jpegformat_d.h...
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Generating code for file aims/io/listItemR.h...
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Generating code for file aims/io/macosxbugs.h...
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Generating code for file aims/io/mniobjheader.h...
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Generating code for file aims/io/plyfinderformat.h...
Generating code for file aims/io/plyformat.h...
Generating code for file aims/io/plyformat_d.h...
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Generating code for file aims/io/plyr.h...
Generating code for file aims/io/plyw.h...
Generating code for file aims/io/povW.h...
Generating code for file aims/io/process.h...
Generating code for file aims/io/reader.h...
Generating code for file aims/io/reader_d.h...
Generating code for file aims/io/readerasobject.h...
Generating code for file aims/io/roiR.h...
Generating code for file aims/io/scaledcoding.h...
Generating code for file aims/io/selectionr.h...
Generating code for file aims/io/selectionw.h...
Generating code for file aims/io/spmattribconverter.h...
Generating code for file aims/io/spmheader.h...
Generating code for file aims/io/spmR.h...
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Generating code for file aims/io/tensorItemR.h...
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Generating code for file aims/io/texheader.h...
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Generating code for file aims/io/tifffinderformat.h...
Generating code for file aims/io/tiffformat.h...
Generating code for file aims/io/tiffformat_d.h...
Generating code for file aims/io/tiffheader.h...
Generating code for file aims/io/tiffR.h...
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Generating code for file aims/io_soma/trm_compose_formatchecker.h...
Generating code for file aims/io_soma/trm_compose_formatreader.h...
Generating code for file aims/io_soma/trm_header_formatchecker.h...
Generating code for file aims/io_soma/trm_header_formatreader.h...
Generating code for file aims/io_soma/trmformatchecker.h...
Generating code for file aims/io_soma/trmformatreader.h...
Generating code for file aims/io_soma/trmformatwriter.h...
Generating code for file aims/io_soma/trmgraphformatchecker.h...
Generating code for file aims/io_soma/trmgraphformatreader.h...
Generating code for file aims/io_soma/trmgraphformatwriter.h...
Generating code for file aims/io_soma/trmingraphformatchecker.h...
Generating code for file aims/io_soma/trmingraphformatreader.h...
Generating code for file aims/math/dtitensor.h...
Generating code for file aims/math/gausslu.h...
Generating code forConsolidate compiler generated dependencies of target highres-cortex
[ 53%] Create "share/doc/5.1"
[ 53%] Built target soma-base-devdoc
Consolidate compiler generated dependencies of target AimsRTiff
[ 53%] Built target highres-cortex
[ 53%] Built target AimsRTiff
Consolidate compiler generated dependencies of target AimsAttributedViewer
Consolidate compiler generated dependencies of target AimsLabelSelector
[ 53%] Built target AimsAttributedViewer
[ 53%] Built target AimsLabelSelector
Consolidate compiler generated dependencies of target ylLaplacian
Consolidate compiler generated dependencies of target ylIsoCurvature
Consolidate compiler generated dependencies of target aimsalgo
[ 53%] Built target ylLaplacian
 file aims/math/integrator.h...
Generating code for file aims/math/lagrange.h...
Generating code for file aims/math/mathelem.h...
Generating code for file aims/math/mathelemrgb.h...
Generating code for file aims/math/romberg.h...
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Generating code for file aims/math/tensor.h...
Generating code for file aims/math/trapezeitg.h...
Generating code for file aims/math/trieder.h...
Generating code for file aims/memmap/allocator.h...
Generating code for file aims/mesh/cutmesh.h...
Generating code for file aims/mesh/cutmesh_d.h...
Generating code for file aims/mesh/mesh_rasterization_d.h...
Generating code for file aims/mesh/surface.h...
Generating code for file aims/mesh/surface_g.h...
Generating code for file aims/mesh/surfacegen.h...
Generating code for file aims/mesh/surfacemanip.h...
Generating code for file aims/mesh/surfacemanip_d.h...
Generating code for file aims/mesh/surfaceOperation.h...
Generating code for file aims/mesh/tex2graph.h...
Generating code for file aims/mesh/tex2graph_d.h...
Generating code for file aims/mesh/texture.h...
Generating code for file aims/mesh/texturetools.h...
Generating code for file aims/meshprojection/meshprojection.h...
Generating code for file aims/meshprojection/meshprojection_d.h...
Generating code for file aims/plugin/ecatplugin.h...
Generating code for file aims/plugin/fdfplugin.h...
Generating code for file aims/plugin/giftiplugin.h...
Generating code for file aims/plugin/jpegplugin.h...
Generating code for file aims/plugin/plyplugin.h...
Generating code for file aims/plugin/tiffplugin.h...
Generating code for file aims/plugin/vidaplugin.h...
Generating code for file aims/resampling/linearInterpolator.h...
Generating code for file aims/resampling/mask.h...
Generating code for file aims/resampling/mask_d.h...
Generating code for file aims/resampling/motion.h...
Generating code for file aims/resampling/quaternion.h...
Generating code for file aims/resampling/standardreferentials.h...
Generating code for file aims/rgb/rgb.h...
Generating code for file aims/rgb/rgbnorm.h...
Generating code for file aims/roi/fill.h...
Generating code for file aims/roi/fill_d.h...
Generating code for file aims/roi/hie.h...
Generating code for file aims/roi/maskIterator.h...
Generating code for file aims/roi/roi.h...
Generating code for file aims/roi/roi_diff.h...
Generating code for file aims/roi/roi_g.h...
Generating code for file aims/roi/roiIterator.h...
Generating code for file aims/roi/voxelSampling.h...
Generating code for file aims/rply/rply.h...
Generating code for file aims/selection/selection.h...
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Generating code for file aims/sino/sino.h...
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Generating code for file aims/sparsematrix/ciftitools.h...
Generating code for file aims/sparsematrix/sparseMatrix.h...
Generating code for file aims/sparsematrix/sparseMatrixItemR.h...
Generating code for file aims/sparsematrix/sparseMatrixItemW.h...
Generating code for file aims/sparsematrix/sparsematrixutil.h...
Generating code for file aims/sparsematrix/sparseordensematrix.h...
Generating code for file aims/texdata/texdata.h...
Generating code for file aims/transformation/affinetransformation3d.h...
Generating code for file aims/transformation/transformation.h...
Generating code for file aims/transformation/transformation_chain.h...
Generating code for file aims/transformation/transformationgraph3d.h...
Generating code for file aims/utility/anytype_reader.h...
Generating code for file aims/utility/anytype_reader_details.h...
Generating code for file aims/utility/bininverse.h...
Generating code for file aims/utility/boundingbox.h...
Generating code for file aims/utility/channel.h...
Generating code for file aims/utility/clock.h...
Generating code for file aims/utility/converter_bucket.h...
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warning: Included by graph for 'aimsdata_config.h' not generated, too many nodes (89), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
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re.h...
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done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
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Consolidate compiler generated dependencies of target vip
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ItemW.h...
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reading sources... [ 40%] api/process
tmesh.h...
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Generating docs for file /casa/host/build/include/aims/doc/aimsdata_doc.h:381: warning: explicit link request to 'include' could not be resolved
/casa/host/build/include/aims/doc/aimsdata_doc.h:383: warning: explicit link request to 'include' could not be resolved
/casa/host/build/include/aims/doc/aimsdata_doc.h:384: warning: explicit link request to 'include' could not be resolved
Consolidate compiler generated dependencies of target constellation
Consolidate compiler generated dependencies of target cortical_surface
Consolidate compiler generated dependencies of target sigraph
[ 60%] Built target constellation
[ 60%] Built target cortical_surface
/casa/host/build/include/aims/resampling/mask.h:46: warning: The following parameters of aims::mask(const BucketMap&lt; Void &gt; &amp;src, const BucketMap&lt; Void &gt; &amp;m, bool intersect=true) are not documented:
  parameter 'src'
  parameter 'm'
[ 60%] Built target soma-base-doc
[autosummary] generating autosummary for: ana_notebook.ipynb, auto_examples/activateaction.rst, auto_examples/addMenuEntry.rst, auto_examples/aimsvolumetest.rst, auto_examples/anaevensimplerviewer.rst, auto_examples/anagraphannotate.rst, auto_examples/anatomistapiTests.rst, auto_examples/bvProcessSocket.rst, auto_examples/control.rst, auto_examples/customcommands.rst, ..., pyanatomist_headless.rst, pyanatomist_howto.rst, pyanatomist_notebook.rst, pyanatomist_pyaims_tutorial.rst, pyanatomist_socket.rst, pyanatomist_threaded.rst, pyanatomist_tutorial.rst, pyanatomist_tutorial_nb.ipynb, pyanatomist_wip.rst, sg_execution_times.rst
Consolidate compiler generated dependencies of target Aims3DPointCloud
/casa/host/build/include/aims/border/borderiterator.h:187: warning: argument 'move' of command @param is not found in the argument list of aims::BorderIterator&lt; T &gt;::const_iterator::computeNext(const Point4dl &amp;p) const
[ 60%] Built target Aims3DPointCloud
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Consolidate compiler generated dependencies of target AimsActivPixel2Volume
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[ 66%] Built target AimsActivPixel2Volume
Consolidate compiler generated dependencies of target AimsApplyTransform
[ 66%] Built target AimsAddNoise2Data
Consolidate compiler generated dependencies of target AimsApplyVectorField
aims/utility/utility_g.h...
Generating docs for file aims/vector/vector.h...
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Generating docs for compound ChannelSelector&lt; AimsVector&lt; T, D &gt;, U &gt;...
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Generating docs for compound TexType...
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Generating namespace index...
Generating docs for namespace aims
Generating docs for compound aims::BorderFiller...
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Generating docs for nested compound aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator...
Generating docs for nested compound aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage...
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Generating docs for compound aims:[ 66%] Built target AimsApplyTransform
Consolidate compiler generated dependencies of target AimsBuildDti
[ 66%] Built target AimsApplyVectorField
Consolidate compiler generated dependencies of target AimsBuildIndex
[ 66%] Built target AimsBuildDti
Consolidate compiler generated dependencies of target AimsBvalue
[ 66%] Built target AimsBuildIndex
Consolidate compiler generated dependencies of target AimsChamferDistanceMap
[ 66%] Built target AimsBvalue
Consolidate compiler generated dependencies of target AimsClusterArg
[ 66%] Built target AimsChamferDistanceMap
Consolidate compiler generated dependencies of target AimsConvexHull
[ 66%] Built target AimsClusterArg
/casa/host/build/include/aims/fibers/bundleSampler.h:65: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &amp;bundle_name, const std::string &amp;sampled_bundle_name, int mode) is not documented:
  parameter 'sampled_bundle_name'
/casa/host/build/include/aims/fibers/bundleSampler.h:76: warning: The following parameter of aims::BundleSampler::BundleSampler(float percent, const std::string &amp;bundle_name, const std::string &amp;sampled_bundle_name, int mode, bool discarded) is not documented:
  parameter 'sampled_bundle_name'
[ 66%] Built target AimsConvexHull
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsCorrectionEpi
Consolidate compiler generated dependencies of target AimsT2BasedCorrectionEpi
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsCreateTexture
[ 66%] Built target AimsT2BasedCorrectionEpi
[ 66%] Built target AimsCorrectionEpi
[ 66%] Built target AimsCreateTexture
Consolidate compiler generated dependencies of target AimsCurvature2d
:StructuringElement...
Generating docs for compound aims::StructuredVolume...
Generating docs for compound aims::StructuredConstVolume...
Generating docs for compound aims::StructuringElementRef...
Generating docs for compound aims::Polyline...
Generating docs for compound aims::PolylinePolynomialInterpolator...
Generating docs for nested compound aims::PolylinePolynomialInterpolator::Sampler...
Generating docs for compound aims::AimsFastAllocationData...
Generating docs for compound aims::Header...
Generating docs for compound aims::PythonHeader...
Generating docs for compound aims::SliceFormatHeader...
Generating docs for compound aims::Path...
Generating docs for compound aims::Settings...
Generating docs for compound aims::ScalarFeaturesProvider...
Generating docs for compound aims::ScalarSetFeatures...
Generating docs for compound aims::PointSetFeatures...
Generating docs for compound aims::PointsInImageFeatures...
Generating docs for compound aims::RoiFeatures...
Generating docs for compound aims::Bundle...
Generating docs for compound aims::Bundles...
Generating docs for compound aims::FiberInfo...
Generating docs for compound aims::BundleInfo...
Generating docs for compound aims::BundleListener...
Generating docs for compound aims::BundleProducer...
Generating docs for compound aims::BundleWriter...
Generating docs for compound aims::BundleReader...
Generating docs for compound aims::BundleFormatReader...
Generating docs for compound aims::ConnectomistBundlesReader...
Generating docs for compound aims::BundleToGraph...
Generating docs for compound aims::BundleToGraphWriter...
Generating docs for compound aims::BundleROISplit...
Generating docs for compound aims::BundleROISelect...
Generating docs for compound aims::BundleMotion...
Generating docs for compound aims::CurveSelection...
Generating docs for compound aims::CurveOrientation...
Generating docs for compound aims::BundlesFeatures...
Generating docs for compound aims::BundlesFusion...
Generating docs for compound aims::BundleRegroup...
Generating docs for compound aims::BundleSampler...
Generating docs for compound aims::BundlesSlicerListener...
Generating docs for compound aims::BundlesSlicer...
Generating docs for compound aims::SimpleBundlesSlicer...
Generating docs for compound aims::BundleSlicesToMesh...
Generating docs for compound aims::FiberOversampler...
Generating docs for compound aims::MRTrixBundleReader...
Generating docs for compound aims::TrackvisBundleReader...
Generating docs for compound aims::AimsApplication...
Generating docs for compound aims::ProcessInput...
Generating docs for compound aims::GraphElementCode...
Generating docs for compound aims::GraphManip...
Generating docs for compound aims::AimsGraphReader...
Generating docs for nested compound aims::AimsGraphReader::ElementInfo...
Generating docs for nested compound aims::AimsGraphReader::ObjectWrapper...
Generating docs for nested compound aims::AimsGraphReader::PostProcessor...
Generating docs for nested compound aims::AimsGraphReader::Wrapper...
Generating docs for compound aims::AimsGraphWriter...
Generating docs for nested compound aims::AimsGraphWriter::ElementInfo...
Generating docs for nested compound aims::AimsGraphWriter::ObjectWrapper...
Generating docs for nested compound aims::AimsGraphWriter::Wrapper...
Generating docs for compound aims::AimsGraphWriter_Private...
Generating docs for compound aims::APCReader...
Generating docs for compound aims::ArgHeader...
Generating docs for compound aims::LowLevelArgReader...
Generating docs for compound aims::ArgReader...
Generating docs for compound aims::LowLevelStandardArgReader...
Generating docs for compound aims::LowLevelArgWriter...
Generating docs for compound aims::ArgWriter...
Generating docs for compound aims::LowLevelStandardArgWriter...
Generating docs for compound aims::BckFormat...
Generating docs for compound aims::BckMapFormat...
Generating docs for compound aims::VolumeFormat...
Generating docs for compound aims::VolumeRefFormat...
Generating docs for compound aims::MinfFormat...
Generating docs for compound aiConsolidate compiler generated dependencies of target AimsCurvature3d
Consolidate compiler generated dependencies of target AimsCylinder
[ 66%] Built target AimsCurvature2d
[ 66%] Built target AimsCurvature3d
[ 66%] Built target AimsCylinder
Consolidate compiler generated dependencies of target AimsCompareSPMtToPrimalSketch
Consolidate compiler generated dependencies of target AimsDanielssonDist
Consolidate compiler generated dependencies of target AimsElevationMap
[ 73%] Built target AimsCompareSPMtToPrimalSketch
[ 73%] Built target AimsDanielssonDist
[ 73%] Built target AimsElevationMap
Consolidate compiler generated dependencies of target AimsFrontDistanceMap
Consolidate compiler generated dependencies of target AimsFoldArgAtt
Consolidate compiler generated dependencies of target AimsGaussianSmoothing
[ 73%] Built target AimsFoldArgAtt
[ 73%] Built target AimsFrontDistanceMap
[ 73%] Built target AimsGaussianSmoothing
ms::ArgFormat...
Generating docs for compound aims::GraphVolumeFormat...
Generating docs for compound aims::HieFormat...
Generating docs for compound aims::MeshFormat...
Generating docs for compound aims::TriFormat...
Generating docs for compound aims::PovFormat...
Generating docs for compound aims::Vrml1Format...
Generating docs for compound aims::MniObjFormat...
Generating docs for compound aims::WavefrontMeshFormat...
Generating docs for compound aims::ImasFormat...
Generating docs for compound aims::ImasSorDFormat...
Generating docs for compound aims::StxFormat...
Generating docs for compound aims::TexFormat...
Generating docs for compound aims::SpmFormat...
Generating docs for compound aims::GenesisFormat...
Generating docs for compound aims::ImasVolFormat...
Generating docs for compound aims::SomaIOAimsDataFormat...
Generating docs for compound aims::BckHeader...
Generating docs for compound aims::DefaultItemReader&lt; AimsBucketItem&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; AimsBucketItem&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; AimsBucketItem&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultItemWriter&lt; AimsBucketItem&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; AimsBucketItem&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; AimsBucketItem&lt; T &gt; &gt;...
Generating docs for compound aims::BckReader...
Generating docs for compound aims::BckWriter...
Generating docs for compound aims::BckMapReader...
Generating docs for compound aims::BckMapWriter...
Generating docs for compound aims::ChannelReader...
Generating docs for compound aims::CoarseReader...
Generating docs for compound aims::DefaultItemReader...
Generating docs for compound aims::DefaultAsciiItemReader...
Generating docs for compound aims::DefaultBSwapItemReader...
Generating docs for compound aims::DefaultItemReader&lt; AimsVector&lt; T, D &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; AimsVector&lt; T, D &gt; &gt;...
Generating docs for compound aims::DefaultItemWriter...
Generating docs for compound aims::DefaultAsciiItemWriter...
Generating docs for compound aims::DefaultBSwapItemWriter...
Generating docs for compound aims::DefaultItemWriter&lt; AimsVector&lt; T, D &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; AimsVector&lt; T, D &gt; &gt;...
Generating docs for compound aims::DefaultItemReader&lt; DtiTensor &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; DtiTensor &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; DtiTensor &gt;...
Generating docs for compound aims::DefaultItemWriter&lt; DtiTensor &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; DtiTensor &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; DtiTensor &gt;...
Generating docs for compound aims::Finder...
Generating docs for compound aims::FinderSpmFormat...
Generating docs for compound aims::FinderGenesisFormat...
Generating docs for compound aims::FinderMeshFormat...
Generating docs for compound aims::FinderTriFormat...
Generating docs for compound aims::FinderMniObjFormat...
Generating docs for compound aims::FinderWavefrontFormat...
Generating docs for compound aims::FinderTexFormat...
Generating docs for compound aims::FinderBckFormat...
Generating docs for compound aims::FinderGraphFormat...
Generating docs for compound aims::FinderTrmFormat...
Generating docs for compound aims::FinderHieFormat...
Generating docs for compound aims::FinderImasFormat...
Generating docs for compound aims::FileFormat...
Generating docs for compound aims::FinderFormat...
Generating docs for compound aims::FileFormatDictionary...
Generating docs for compound aims::IOObjectTypesDictionary...
Generating docs for compound aims::GenesisHeader...
Generating docs for compound aims::GenesisReader...
Generating docs for compound aims::GraphBundlesFormat...
Generating docs for compound aims::HierarchyReader...
Generating docs for compound aims::ImasHeader...
Generating docs for compound aims::IOOptions...
Generating docs for compound aims::ItemReader...
Generating docsConsolidate compiler generated dependencies of target AimsGaussianSmoothing1d
Consolidate compiler generated dependencies of target AimsGraphMesh
Consolidate compiler generated dependencies of target AimsGraphTransferLabels
[ 73%] Built target AimsGraphMesh
[ 73%] Built target AimsGaussianSmoothing1d
[ 73%] Built target AimsGraphTransferLabels
/casa/host/build/include/aims/io/motionW.h:61: warning: argument 'openmode' of command @param is not found in the argument list of aims::MotionWriter::MotionWriter(const std::string &amp;name, int mode=std::ios::out)
/casa/host/build/include/aims/io/motionW.h:64: warning: The following parameter of aims::MotionWriter::MotionWriter(const std::string &amp;name, int mode=std::ios::out) is not documented:
  parameter 'mode'
/casa/host/build/include/aims/io/spmR.h:79: warning: argument 'border' of command @param is not found in the argument list of aims::SpmReader&lt; T &gt;::read(AimsData&lt; T &gt; &amp;thing, const carto::AllocatorContext &amp;context, carto::Object options)
/casa/host/build/include/aims/io/spmR.h:83: warning: The following parameters of aims::SpmReader::read(AimsData&lt; T &gt; &amp;thing, const carto::AllocatorContext &amp;context, carto::Object options) are not documented:
  parameter 'context'
  parameter 'options'
Consolidate compiler generated dependencies of target AimsHippocampicReferential
Consolidate compiler generated dependencies of target AimsGTMDump
Consolidate compiler generated dependencies of target AimsIcmSpaghetti
[ 73%] Built target AimsHippocampicReferential
[ 73%] Built target AimsIcmSpaghetti
[ 73%] Built target AimsGTMDump
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsIcosaList
Consolidate compiler generated dependencies of target AimsImageGLBlobStats
Consolidate compiler generated dependencies of target AimsIcmSpaghettiN
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:19,229::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
[ 73%] Built target AimsIcosaList
[ 73%] Built target AimsImageGLBlobStats
[ 73%] Built target AimsIcmSpaghettiN
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
Consolidate compiler generated dependencies of target AimsImageSmoothing
Consolidate compiler generated dependencies of target AimsImageScaleSpace
Consolidate compiler generated dependencies of target AimsImagePrimalSketch
[ 73%] Built target AimsImageScaleSpace
[ 73%] Built target AimsImageSmoothing
[ 73%] Built target AimsImagePrimalSketch
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:167: warning: Unsupported xml/html tag &lt;region&gt; found
/casa/host/build/include/aims/mesh/surfacemanip.h:175: warning: Unsupported xml/html tag &lt;region&gt; found
 for compound aims::DefaultItemReader&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::ItemWriter...
Generating docs for compound aims::DefaultItemWriter&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::LabelReader...
Generating docs for compound aims::DefaultItemReader&lt; std::list&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; std::list&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; std::list&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultItemWriter&lt; std::list&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; std::list&lt; T &gt; &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; std::list&lt; T &gt; &gt;...
Generating docs for compound aims::MniObjHeader...
Generating docs for compound aims::MotionWriter...
Generating docs for compound aims::PovWriter...
Generating docs for compound aims::ScaledEncoding...
Generating docs for compound aims::SelectionReader...
Generating docs for compound aims::SelectionWriter...
Generating docs for compound aims::SpmReader...
Generating docs for compound aims::SpmHeader...
Generating docs for compound aims::SpmWriter...
Generating docs for compound aims::DefaultItemReader&lt; Trieder &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; Trieder &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; Trieder &gt;...
Generating docs for compound aims::DefaultItemWriter&lt; Trieder &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; Trieder &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; Trieder &gt;...
Generating docs for compound aims::TrmHeader...
Generating docs for compound aims::Reader...
Generating docs for compound aims::ReaderAsObject...
Generating docs for compound aims::GenericWriter...
Generating docs for compound aims::Writer...
Generating docs for compound aims::MeshHeader...
Generating docs for compound aims::MeshReader...
Generating docs for compound aims::MeshWriter...
Generating docs for compound aims::LowLevelRoiReader...
Generating docs for compound aims::DefaultItemReader&lt; Tensor &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; Tensor &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; Tensor &gt;...
Generating docs for compound aims::DefaultItemWriter&lt; Tensor &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; Tensor &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; Tensor &gt;...
Generating docs for compound aims::TriHeader...
Generating docs for compound aims::TriReader...
Generating docs for compound aims::TriWriter...
Generating docs for compound aims::TexHeader...
Generating docs for compound aims::TexReader...
Generating docs for compound aims::TexWriter...
Generating docs for compound aims::Process...
Generating docs for compound aims::WavefrontHeader...
Generating docs for compound aims::WavefrontMeshWriter...
Generating docs for compound aims::WavefrontMeshWriter&lt; D, Void &gt;...
Generating docs for compound aims::WavefrontMeshReader...
Generating docs for compound aims::IntegrableOf...
Generating docs for compound aims::IntegratorOf...
Generating docs for compound aims::MathUtil...
Generating docs for compound aims::RombergIntegratorOf...
Generating docs for compound aims::TrapezeIntegratorOf...
Generating docs for compound aims::CutMesh...
Generating docs for compound aims::CutTexturedMesh...
Generating docs for compound aims::SurfaceGenerator...
Generating docs for nested compound aims::SurfaceGenerator::Generator...
Generating docs for nested compound aims::SurfaceGenerator::Generator_wireframe...
Generating docs for compound aims::SurfaceManip...
Generating docs for compound aims::Tex2Graph...
Generating docs for compound aims::MeshProjection...
Generating docs for compound aimConsolidate compiler generated dependencies of target AimsInflate
Consolidate compiler generated dependencies of target AimsParameterize2DImageDomain
Consolidate compiler generated dependencies of target AimsLightenAtlas
[ 73%] Built target AimsLightenAtlas
[ 73%] Built target AimsInflate
[ 73%] Built target AimsParameterize2DImageDomain
Consolidate compiler generated dependencies of target AimsMedianSmoothing
Consolidate compiler generated dependencies of target AimsMask
Consolidate compiler generated dependencies of target AimsMeanCurvFlow
reading sources... [ 33%] python_bv_data
[ 73%] Built target AimsMedianSmoothing
[ 73%] Built target AimsMeanCurvFlow
[ 73%] Built target AimsMask
Consolidate compiler generated dependencies of target AimsMerge
Consolidate compiler generated dependencies of target AimsSmoothing
Consolidate compiler generated dependencies of target AimsMesh
[ 73%] Built target AimsSmoothing
[ 73%] Built target AimsMesh
[ 73%] Built target AimsMerge
/casa/host/build/include/aims/io/process.h:215: warning: Found unknown command '\process'
/casa/host/build/include/aims/utility/progress.h:77: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 min, const T1 max, const T2 progressmin=(T2) 0, const T2 progressmax=(T2) 100, const std::string unit="%%", const int width=3, std::ostream &amp;stream=std::cout) is not documented:
  parameter 'stream'
/casa/host/build/include/aims/utility/progress.h:87: warning: The following parameter of aims::ProgressInfo::ProgressInfo(const T1 max, std::ostream &amp;stream=std::cout) is not documented:
  parameter 'stream'
Consolidate compiler generated dependencies of target AimsMesh2Ascii
Consolidate compiler generated dependencies of target AimsMesh2Sphere
Consolidate compiler generated dependencies of target AimsMesh2SSGraph
[ 73%] Built target AimsMesh2Ascii
[ 73%] Built target AimsMesh2SSGraph
[ 73%] Built target AimsMesh2Sphere
Consolidate compiler generated dependencies of target AimsMeshBrain
Consolidate compiler generated dependencies of target AimsMeshAverage
Consolidate compiler generated dependencies of target AimsMeshBlobExtract
/casa/host/build/include/aims/io/vidaR.h:67: warning: The following parameters of aims::VidaReader::read(AimsData&lt; T &gt; &amp;thing, const carto::AllocatorContext &amp;context, carto::Object options) are not documented:
  parameter 'context'
  parameter 'options'
s::MeshProjectionFactory...
Generating docs for compound aims::DecomposedAffineTransformation3d...
Generating docs for compound aims::Interpolator...
Generating docs for compound aims::LinearInterpolator...
Generating docs for compound aims::Quaternion...
Generating docs for compound aims::StandardReferentials...
Generating docs for compound aims::Hierarchy...
Generating docs for compound aims::specifiedLabels...
Generating docs for compound aims::MaskIterator...
Generating docs for compound aims::MotionedMaskIterator...
Generating docs for compound aims::MaskIteratorOf...
Generating docs for compound aims::NodeFilter...
Generating docs for compound aims::LabelNodeFilter...
Generating docs for compound aims::NameNodeFilter...
Generating docs for compound aims::MaskIteratorOf&lt; Graph &gt;...
Generating docs for compound aims::MaskIteratorOf&lt; carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::ROILabelMap...
Generating docs for compound aims::VolumeROILabelMap...
Generating docs for compound aims::MotionedVolumeROILabelMap...
Generating docs for compound aims::RoiIterator...
Generating docs for compound aims::MotionedRoiIterator...
Generating docs for compound aims::RoiIteratorOf...
Generating docs for compound aims::RoiIteratorOf&lt; Graph &gt;...
Generating docs for compound aims::RoiIteratorOf&lt; carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::AimsRoi...
Generating docs for compound aims::RoiDiff...
Generating docs for nested compound aims::RoiDiff::DiffStat...
Generating docs for compound aims::VoxelSampler...
Generating docs for compound aims::SimpleVoxelSampler...
Generating docs for compound aims::Selection...
Generating docs for compound aims::SelectionSet...
Generating docs for compound aims::Selector...
Generating docs for compound aims::SelectionExpander...
Generating docs for compound aims::CiftiTools...
Generating docs for compound aims::SparseMatrix...
Generating docs for compound aims::DefaultItemReader&lt; SparseMatrix &gt;...
Generating docs for compound aims::DefaultAsciiItemReader&lt; SparseMatrix &gt;...
Generating docs for compound aims::DefaultBSwapItemReader&lt; SparseMatrix &gt;...
Generating docs for compound aims::DefaultItemWriter&lt; SparseMatrix &gt;...
Generating docs for compound aims::DefaultAsciiItemWriter&lt; SparseMatrix &gt;...
Generating docs for compound aims::DefaultBSwapItemWriter&lt; SparseMatrix &gt;...
Generating docs for compound aims::SparseMatrixUtil...
Generating docs for compound aims::SparseOrDenseMatrix...
Generating docs for nested compound aims::SparseOrDenseMatrix::MatrixLazyReader...
Generating docs for compound aims::AffineTransformation3d...
Generating docs for compound aims::TransformationChain3d...
Generating docs for compound aims::TransformationGraph3d...
Generating docs for compound aims::AnyTypeReaderProcess...
Generating docs for compound aims::AnyTypeReader...
Generating docs for compound aims::BoundingBox...
Generating docs for compound aims::Clock...
Generating docs for compound aims::const_cyclic_iterator...
Generating docs for compound aims::cyclic_iterator...
Generating docs for compound aims::ProgressInfo...
Generating docs for compound aims::EcatFormat...
Generating docs for compound aims::EcatHeader...
Generating docs for compound aims::EcatReader...
Generating docs for compound aims::EcatSinoHeader...
Generating docs for compound aims::EcatSinoReader...
Generating docs for compound aims::EcatSinoWriter...
Generating docs for compound aims::EcatWriter...
Generating docs for compound aims::FinderEcatFormat...
Generating docs for compound aims::EcatPlugin...
Generating docs for compound aims::ScannerConf...
Generating docs for compound aims::Sinogram...
Generating docs for compound aims::FinderVidaFormat...
Generating docs for compound aims::VidaFormat...
Generating docs for compound aims::VidaHeader...
Generating docs for compound aims::VidaReader...
Generating docs for compound aims::VidaWriter...
Generating docs for compound aims::VidaPlugin...
Generating docs for compound aims::PlyFormat...
Generating docs for compound aims::PlyHeader...
Generating docs for compound aims::P[ 73%] Built target AimsMeshAverage
[ 73%] Built target AimsMeshBlobExtract
[ 73%] Built target AimsMeshBrain
Consolidate compiler generated dependencies of target AimsMeshCheckClosed
Consolidate compiler generated dependencies of target AimsMeshCC2Arg
Consolidate compiler generated dependencies of target AimsMeshCleaner
[ 73%] Built target AimsMeshCleaner
[ 73%] Built target AimsMeshCC2Arg
[ 73%] Built target AimsMeshCheckClosed
/casa/host/build/include/aims/data/cartodatavolume.h:63: warning: End of list marker found without any preceding list items
Consolidate compiler generated dependencies of target AimsMeshCurvature
Consolidate compiler generated dependencies of target AimsMeshConnectedComponent
Consolidate compiler generated dependencies of target AimsMeshDecimation
[ 73%] Built target AimsMeshCurvature
[ 73%] Built target AimsMeshDecimation
[ 73%] Built target AimsMeshConnectedComponent
generating gallery...
lyReader...
Generating docs for compound aims::PlyWriter...
Generating docs for compound aims::FinderPlyFormat...
Generating docs for compound aims::PlyPlugin...
Generating docs for compound aims::FdfFormat...
Generating docs for compound aims::FdfHeader...
Generating docs for compound aims::FdfReader...
Generating docs for compound aims::FinderFdfFormat...
Generating docs for compound aims::FdfParType...
Generating docs for compound aims::FdfProcPar...
Generating docs for compound aims::FdfPlugin...
Generating docs for compound aims::JpegFormat...
Generating docs for compound aims::JpegHeader...
Generating docs for compound aims::JpegReader...
Generating docs for compound aims::JpegWriter...
Generating docs for compound aims::FinderJpegFormat...
Generating docs for compound aims::JpegPlugin...
Generating docs for compound aims::TiffFormat...
Generating docs for compound aims::TiffHeader...
Generating docs for compound aims::TiffReader...
Generating docs for compound aims::TiffWriter...
Generating docs for compound aims::FinderTiffFormat...
Generating docs for compound aims::TiffPlugin...
Generating docs for compound aims::GiftiMeshFormat...
Generating docs for compound aims::GiftiTextureFormat...
Generating docs for compound aims::GiftiHeader...
Generating docs for compound aims::FinderGiftiFormat...
Generating docs for compound aims::_convertedNiftiValue...
Generating docs for compound aims::_convertedNiftiValue&lt; AimsVector&lt; U, D &gt; &gt;...
Generating docs for compound aims::_convertedNiftiArrayValue...
Generating docs for compound aims::_convertedNiftiArrayValue&lt; AimsVector&lt; U, D &gt; &gt;...
Generating docs for compound aims::GiftiPlugin...
Generating docs for namespace aims::DataManip
Generating docs for namespace aims::detail
Generating docs for compound aims::detail::cyclic_iterator_base...
Generating docs for namespace aims::internal
Generating docs for compound aims::internal::AimsGraphReader_Private...
Generating docs for namespace aims::strel
Generating docs for compound aims::strel::Shape...
Generating docs for compound aims::strel::ShapeFactory...
Generating docs for compound aims::strel::Connectivity...
Generating docs for compound aims::strel::ConnectivityFactory...
Generating docs for compound aims::strel::ClockWiseCircleXY...
Generating docs for namespace carto
Generating docs for compound carto::DataTypeCode&lt; AimsBucket&lt; T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; aims::BucketMap&lt; T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; AimsData&lt; T &gt; &gt;...
Generating docs for compound carto::Divider&lt; AimsVector&lt; T, D &gt;, U &gt;...
Generating docs for compound carto::AimsDataInfo...
Generating docs for compound carto::SingleOption&lt; aims::Reader&lt; T &gt; &gt;...
Generating docs for compound carto::SingleOption&lt; aims::Writer&lt; T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; AimsTimeSurface&lt; D, T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; AimsTimeSurface&lt; 2, T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; AimsTimeSurface&lt; 4, T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; TimeTexture&lt; T &gt; &gt;...
Generating docs for compound carto::DataTypeCode&lt; aims::SparseMatrix &gt;...
Generating docs for compound carto::DataTypeCode&lt; aims::SparseOrDenseMatrix &gt;...
Generating docs for compound carto::DataTypeCode&lt; aims::AffineTransformation3d &gt;...
Generating docs for compound carto::RawConverter&lt; aims::BucketMap&lt; INP &gt;, aims::BucketMap&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; aims::BucketMap&lt; INP &gt;, rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; aims::BucketMap&lt; INP &gt;, VolumeRef&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; aims::BucketMap&lt; Void &gt;, rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; aims::BucketMap&lt; Void &gt;, VolumeRef&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; rc_ptr&lt; Volume&lt; INP &gt; &gt;, aims::BucketMap&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; VolumeRef&lt; INP &gt;, aims::BucketMap&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverConsolidate compiler generated dependencies of target AimsMeshDistance
Consolidate compiler generated dependencies of target AimsMeshLineMeasurement
Consolidate compiler generated dependencies of target AimsMeshGeodesicDepth
[ 73%] Built target AimsMeshDistance
generating gallery for auto_examples... [  4%] volumetest.py
generating gallery for auto_examples... [  8%] nomenclatureselection.py
[ 73%] Built target AimsMeshLineMeasurement
generating gallery for auto_examples... [ 13%] graph.py
[ 73%] Built target AimsMeshGeodesicDepth
generating gallery for auto_examples... [ 17%] events.py
generating gallery for auto_examples... [ 21%] customcommands.py
generating gallery for auto_examples... [ 26%] addMenuEntry.py
ter&lt; rc_ptr&lt; Volume&lt; INP &gt; &gt;, aims::BucketMap&lt; Void &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; VolumeRef&lt; INP &gt;, aims::BucketMap&lt; Void &gt; &gt;...
Generating docs for compound carto::ConverterAllocator&lt; aims::BucketMap&lt; INP &gt;, aims::BucketMap&lt; OUTP &gt; &gt;...
Generating docs for compound carto::ConverterAllocator&lt; aims::BucketMap&lt; INP &gt;, rc_ptr&lt; Volume&lt; OUTP &gt; &gt; &gt;...
Generating docs for compound carto::ConverterAllocator&lt; aims::BucketMap&lt; INP &gt;, VolumeRef&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; INP, AimsHSV &gt;...
Generating docs for compound carto::RawConverter&lt; AimsHSV, OUTP &gt;...
Generating docs for compound carto::RawConverter&lt; AimsHSV, AimsRGB &gt;...
Generating docs for compound carto::RawConverter&lt; AimsHSV, AimsRGBA &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGB, AimsHSV &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGBA, AimsHSV &gt;...
Generating docs for compound carto::RawConverter&lt; INP, AimsRGB &gt;...
Generating docs for compound carto::RawConverter&lt; INP, AimsRGBA &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGB, OUTP &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGBA, OUTP &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGB, AimsRGBA &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGBA, AimsRGB &gt;...
Generating docs for compound carto::RawConverter&lt; AimsVector&lt; T, D &gt;, AimsRGB &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGB, AimsVector&lt; T, D &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; AimsVector&lt; T, D &gt;, AimsRGBA &gt;...
Generating docs for compound carto::RawConverter&lt; AimsRGBA, AimsVector&lt; T, D &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; TimeTexture&lt; INP &gt;, TimeTexture&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; OUTP &gt; &gt;...
Generating docs for compound carto::Rescaler&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; OUTP &gt; &gt;...
Generating docs for compound carto::RawConverter&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; INP &gt; &gt;...
Generating docs for compound carto::ShallowConverter&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; INP &gt; &gt;...
Generating docs for compound carto::ConverterAllocator&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; OUTP &gt; &gt;...
Generating docs for compound carto::ConverterAllocator&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; INP &gt; &gt;...
Generating docs for compound carto::ConverterSwitch&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; INP &gt;, false &gt;...
Generating docs for compound carto::ConverterSwitch&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; INP &gt;, true &gt;...
Generating docs for compound carto::SmartConverter&lt; carto::VolumeRef&lt; INP &gt;, carto::VolumeRef&lt; INP &gt; &gt;...
Generating docs for compound carto::Rescaler&lt; VolumeRef&lt; AimsVector&lt; T, D &gt; &gt;, VolumeRef&lt; AimsRGB &gt; &gt;...
Generating docs for compound carto::Rescaler&lt; VolumeRef&lt; AimsRGB &gt;, VolumeRef&lt; AimsVector&lt; T, D &gt; &gt; &gt;...
Generating docs for namespace carto::internal
Generating docs for compound carto::internal::VolumePrinter...
Generating docs for compound carto::internal::VolumePrinter&lt; OUTP, true &gt;...
Generating docs for compound carto::internal::VolumePrinter&lt; OUTP, false &gt;...
Generating docs for namespace internal
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Generating docs for compound internal::thresh2...
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Generating docs for compound internal::rel_between_with_bounds...
Generating docs for compound internal::rel_between_with_lower_bound...
Generating docs for compound internal::rel_betwegenerating gallery for auto_examples... [ 30%] fusion3D.py
generating gallery for auto_examples... [ 34%] selection.py
generating gallery for auto_examples... [ 39%] activateaction.py
generating gallery for auto_examples... [ 43%] graph_building.py
generating gallery for auto_examples... [ 47%] bvProcessSocket.py
Consolidate compiler generated dependencies of target AimsMeshWhite
Consolidate compiler generated dependencies of target AimsMeshParcellation2VolumeParcellation
generating gallery for auto_examples... [ 52%] aimsvolumetest.py
generating gallery for auto_examples... [ 56%] meshtest.py
generating gallery for auto_examples... [ 60%] sphere.py
Consolidate compiler generated dependencies of target AimsMeshSmoothing
generating gallery for auto_examples... [ 65%] fusion.py
generating gallery for auto_examples... [ 69%] ellipsoid.py
generating gallery for auto_examples... [ 73%] control.py
generating gallery for auto_examples... [ 78%] anagraphannotate.py
generating gallery for auto_examples... [ 82%] customopenglobject.py
generating gallery for auto_examples... [ 86%] volumeMeasures.py
[ 73%] Built target AimsMeshWhite
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generating gallery for auto_examples... [ 91%] anaevensimplerviewer.py
generating gallery for auto_examples... [ 95%] texturedrawing.py
generating gallery for auto_examples... [100%] anatomistapiTests.py
Consolidate compiler generated dependencies of target AimsMorphoMath
Consolidate compiler generated dependencies of target AimsMoment
Consolidate compiler generated dependencies of target AimsMIRegister

[ 73%] Built target AimsMoment
computation time summary:
    - ../examples/activateaction.py:          0.00 sec   0.0 MB
    - ../examples/addMenuEntry.py:            0.00 sec   0.0 MB
    - ../examples/aimsvolumetest.py:          0.00 sec   0.0 MB
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    - ../examples/anagraphannotate.py:        0.00 sec   0.0 MB
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    - ../examples/customopenglobject.py:      0.00 sec   0.0 MB
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    - ../examples/events.py:                  0.00 sec   0.0 MB
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    - ../examples/meshtest.py:                0.00 sec   0.0 MB
    - ../examples/nomenclatureselection.py:   0.00 sec   0.0 MB
    - ../examples/selection.py:               0.00 sec   0.0 MB
    - ../examples/sphere.py:                  0.00 sec   0.0 MB
    - ../examples/texturedrawing.py:          0.00 sec   0.0 MB
    - ../examples/volumeMeasures.py:          0.00 sec   0.0 MB
    - ../examples/volumetest.py:              0.00 sec   0.0 MB
[ 73%] Built target AimsMorphoMath
[ 73%] Built target AimsMIRegister
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updating environment: Consolidate compiler generated dependencies of target AimsNormWithRegion
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Consolidate compiler generated dependencies of target AimsParamCorrectDti
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Consolidate compiler generated dependencies of target AimsPCAloc
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Consolidate compiler generated dependencies of target AimsRegisterBMEstimate
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[ 73%] Built target AimsRegisterBMEstimate
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Consolidate compiler generated dependencies of target AimsSulcusSPAM
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Consolidate compiler generated dependencies of target AimsTextureRegularization
Consolidate compiler generated dependencies of target AimsTextureAverage
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en_with_upper_bound...
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Generating docs for compound std::numeric_limits&lt; carto::Volume&lt; _Tp &gt; &gt;...
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[ 73%] Built target AimsTextureRegularization
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Consolidate compiler generated dependencies of target AimsTextureScaleSpace
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[ 73%] Built target AimsTextureSmoothing
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Consolidate compiler generated dependencies of target AimsVeinExtraction
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Consolidate compiler generated dependencies of target AimsVol2Tex
Consolidate compiler generated dependencies of target AimsZCat
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Consolidate compiler generated dependencies of target AimsSiemensEPI2Volume
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Consolidate compiler generated dependencies of target AimsBundleSelectCenter
Consolidate compiler generated dependencies of target mkhierarchy-anatomist
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[ 73%] Built target AimsBundleSelectCenter
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[ 73%] Built target VipCovarianceMatrix
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Consolidate compiler generated dependencies of target VipFoldArg
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Consolidate compiler generated dependencies of target VipGeometry
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[ 73%] Built target VipFoldArg
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[ 73%] Built target VipGetHead
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[ 73%] Built target VipHomotopicSnake
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Consolidate compiler generated dependencies of target VipTalairachTransform
Consolidate compiler generated dependencies of target VipTopoClassification
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Consolidate compiler generated dependencies of target vip_test_well_composed_topology
Consolidate compiler generated dependencies of target VipInfantHomotopicSnake
Consolidate compiler generated dependencies of target AimsTopHat
Consolidate compiler generated dependencies of target BabyBrainHemiCut
[ 80%] Built target vip_test_well_composed_topology
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[ 80%] Built target BabyCGNCerebSeg
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Consolidate compiler generated dependencies of target readFolds
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Consolidate compiler generated dependencies of target siMkModelEdges
Consolidate compiler generated dependencies of target siMorpho
reading sources... [ 66%] pyanatomist_headless
Consolidate compiler generated dependencies of target siMultilabelCompare
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Consolidate compiler generated dependencies of target AimsAdaptiveSelVoxel
Consolidate compiler generated dependencies of target biodpy
Consolidate compiler generated dependencies of target AimsAxialProjection
[ 80%] Built target AimsAdaptiveSelVoxel
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[ 80%] Built target biodpy
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[ 80%] Built target AimsBorderInfo
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[ 80%] Built target AimsCenterSlices
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Consolidate compiler generated dependencies of target AimsIndividStackSlices
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Consolidate compiler generated dependencies of target AimsInterSliceNormalize
Consolidate compiler generated dependencies of target AimsManualRegistration
[ 80%] Built target AimsIndividStackSlices
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Consolidate compiler generated dependencies of target AimsMidPlaneAlign
reading sources... [100%] pyanatomist_notebook
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[ 80%] Built target bioDetectSlices
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reading sources... [ 80%] api/study_config
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[ 80%] Built target AimsCoordinatesToIndex
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[ 80%] Generating ../../../../share/doc/aimsalgo-5.1/doxygen/index.html
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Consolidate compiler generated dependencies of target bioReadDpy
Consolidate compiler generated dependencies of target AimsAmyloidDensity
Consolidate compiler generated dependencies of target AimsAffineRegister
warning: Tag 'DETAILS_AT_TOP' at line 162 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 948 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: Tag 'XML_DTD' at line 954 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
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warning: Tag 'PERL_PATH' at line 1115 of file '/casa/host/build/build_files/aims-free/aimsalgo/doxygen/Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
[ 80%] Built target bioReadDpy
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[ 80%] Built target AimsAffineRegister
Consolidate compiler generated dependencies of target AimsAmyloidLoadAvgDistNeigh
Consolidate compiler generated dependencies of target AimsAmyloidLoadInvSurfVor
Consolidate compiler generated dependencies of target AimsAmyloidDetection
Doxygen version used: 1.9.1
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 /casa/host/build/include/aims/sparsematrix
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t/build/include/bioprocessing/data
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Consolidate compiler generated dependencies of target AimsBinaryBorder
Consolidate compiler generated dependencies of target AimsBoundingBoxCalculation
clude/soma-io/Dicom/Bruker
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Searching for example files...
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Reading and parsing tag files
Reading tag file '/casa/host/build/share/doc/aimsdata-5.1/doxygen/aimsdata.tag', location '../../aimsdata-5.1/doxygen'Consolidate compiler generated dependencies of target AimsBoundingBoxExtraction
[ 80%] Built target AimsBinaryBorder
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[ 80%] Built target AimsBoundingBoxExtraction
Consolidate compiler generated dependencies of target AimsComponentFeaturesVisualize
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[ 80%] Built target AimsComponentFeaturesProcess
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Consolidate compiler generated dependencies of target AimsChannelProcess
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Consolidate compiler generated dependencies of target AimsEntropicThresholding
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Consolidate compiler generated dependencies of target AimsFovCentering
[ 80%] Built target AimsEntropicThresholding
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Consolidate compiler generated dependencies of target AimsGridCalibrate
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Consolidate compiler generated dependencies of target AimsGridGenerate
[ 80%] Built target AimsGenerateVolume
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[ 80%] Built target AimsGridGenerate
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Reading tag file '/casa/host/build/share/doc/graph-5.1/doxygen/graph.tag', location '../../graph-5.1/doxygen'...
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Reading tag file '/casa/host/build/share/doc/cartodata-5.1/doxygen/cartodata.tag', location '../../cartodata-5.1/doxygen'...
Parsing files
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[ 80%] Built target AimsHeightFiltering
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[ 80%] Built target AimsIndividSlices
aims/connectivity/meshcc.h...
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Consolidate compiler generated dependencies of target AimsInterlaceVolumes
Consolidate compiler generated dependencies of target AimsInterpolate

WARNING: multiple files found for the document "auto_examples/activateaction": ['auto_examples/activateaction.codeobj.json', 'auto_examples/activateaction.rst', 'auto_examples/activateaction.py', 'auto_examples/activateaction.zip', 'auto_examples/activateaction.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/activateaction.rst' for the build.
WARNING: multiple files found for the document "auto_examples/addMenuEntry": ['auto_examples/addMenuEntry.rst', 'auto_examples/addMenuEntry.zip', 'auto_examples/addMenuEntry.codeobj.json', 'auto_examples/addMenuEntry.ipynb', 'auto_examples/addMenuEntry.py']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/addMenuEntry.rst' for the build.
WARNING: multiple files found for the document "auto_examples/aimsvolumetest": ['auto_examples/aimsvolumetest.rst', 'auto_examples/aimsvolumetest.ipynb', 'auto_examples/aimsvolumetest.py', 'auto_examples/aimsvolumetest.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/aimsvolumetest.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anaevensimplerviewer": ['auto_examples/anaevensimplerviewer.ipynb', 'auto_examples/anaevensimplerviewer.rst', 'auto_examples/anaevensimplerviewer.py.md5', 'auto_examples/anaevensimplerviewer.py']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/anaevensimplerviewer.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anagraphannotate": ['auto_examples/anagraphannotate.ipynb', 'auto_examples/anagraphannotate.rst', 'auto_examples/anagraphannotate.py', 'auto_examples/anagraphannotate.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/anagraphannotate.rst' for the build.
WARNING: multiple files found for the document "auto_examples/anatomistapiTests": ['auto_examples/anatomistapiTests.py', 'auto_examples/anatomistapiTests.ipynb', 'auto_examples/anatomistapiTests.zip', 'auto_examples/anatomistapiTests.codeobj.json', 'auto_examples/anatomistapiTests.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/anatomistapiTests.rst' for the build.
WARNING: multiple files found for the document "auto_examples/bvProcessSocket": ['auto_examples/bvProcessSocket.rst', 'auto_examples/bvProcessSocket.ipynb', 'auto_examples/bvProcessSocket.zip', 'auto_examples/bvProcessSocket.codeobj.json', 'auto_examples/bvProcessSocket.py']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/bvProcessSocket.rst' for the build.
WARNING: multiple files found for the document "auto_examples/control": ['auto_examples/control.py.md5', 'auto_examples/control.ipynb', 'auto_examples/control.py', 'auto_examples/control.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/control.rst' for the build.
WARNING: multiple files found for the document "auto_examples/customcommands": ['auto_examples/customcommands.rst', 'auto_examples/customcommands.codeobj.json', 'auto_examples/customcommands.py', 'auto_examples/customcommands.ipynb', 'auto_examples/customcommands.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/customcommands.rst' for the build.
WARNING: multiple files found for the document "auto_examples/customopenglobject": ['auto_examples/customopenglobject.rst', 'auto_examples/customopenglobject.py.md5', 'auto_examples/customopenglobject.ipynb', 'auto_examples/customopenglobject.py']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/customopenglobject.rst' for the build.
WARNING: multiple files found for the document "auto_examples/ellipsoid": ['auto_examples/ellipsoid.ipynb', 'auto_examples/ellipsoid.rst', 'auto_examples/ellipsoid.py', 'auto_examples/ellipsoid.py.md5']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/ellipsoid.rst' for the build.
WARNING: multiple files found for the document "auto_examples/events": ['auto_examples/events.py', 'auto_examples/events.zip', 'auto_examples/events.codeobj.json', 'auto_examples/events.ipynb', 'auto_examples/events.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/events.rst' for the build.
WARNING: multiple files found for the document "auto_examples/fusion": ['auto_examples/fusion.ipynb', 'auto_examples/fusion.rst', 'auto_examples/fusion.py', 'auto_examples/fusion.codeobj.json', 'auto_examples/fusion.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/fusion.rst' for the build.
WARNING: multiple files found for the document "auto_examples/fusion3D": ['auto_examples/fusion3D.ipynb', 'auto_examples/fusion3D.py.md5', 'auto_examples/fusion3D.py', 'auto_examples/fusion3D.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/fusion3D.rst' for the build.
WARNING: multiple files found for the document "auto_examples/graph": ['auto_examples/graph.ipynb', 'auto_examples/graph.py', 'auto_examples/graph.py.md5', 'auto_examples/graph.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/graph.rst' for the build.
WARNING: multiple files found for the document "auto_examples/graph_building": ['auto_examples/graph_building.ipynb', 'auto_examples/graph_building.py', 'auto_examples/graph_building.py.md5', 'auto_examples/graph_building.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/graph_building.rst' for the build.
WARNING: multiple files found for the document "auto_examples/meshtest": ['auto_examples/meshtest.py', 'auto_examples/meshtest.rst', 'auto_examples/meshtest.py.md5', 'auto_examples/meshtest.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/meshtest.rst' for the build.
WARNING: multiple files found for the document "auto_examples/nomenclatureselection": ['auto_examples/nomenclatureselection.rst', 'auto_examples/nomenclatureselection.py.md5', 'auto_examples/nomenclatureselection.py', 'auto_examples/nomenclatureselection.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/nomenclatureselection.rst' for the build.
WARNING: multiple files found for the document "auto_examples/selection": ['auto_examples/selection.rst', 'auto_examples/selection.py.md5', 'auto_examples/selection.ipynb', 'auto_examples/selection.py']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/selection.rst' for the build.
WARNING: multiple files found for the document "auto_examples/sphere": ['auto_examples/sphere.zip', 'auto_examples/sphere.py', 'auto_examples/sphere.ipynb', 'auto_examples/sphere.codeobj.json', 'auto_examples/sphere.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/sphere.rst' for the build.
WARNING: multiple files found for the document "auto_examples/texturedrawing": ['auto_examples/texturedrawing.py', 'auto_examples/texturedrawing.ipynb', 'auto_examples/texturedrawing.codeobj.json', 'auto_examples/texturedrawing.zip', 'auto_examples/texturedrawing.rst']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/texturedrawing.rst' for the build.
WARNING: multiple files found for the document "auto_examples/volumeMeasures": ['auto_examples/volumeMeasures.ipynb', 'auto_examples/volumeMeasures.py', 'auto_examples/volumeMeasures.codeobj.json', 'auto_examples/volumeMeasures.rst', 'auto_examples/volumeMeasures.zip']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/volumeMeasures.rst' for the build.
WARNING: multiple files found for the document "auto_examples/volumetest": ['auto_examples/volumetest.py.md5', 'auto_examples/volumetest.py', 'auto_examples/volumetest.rst', 'auto_examples/volumetest.ipynb']
Use '/casa/host/src/anatomist/anatomist-gpl/5.1/pyanatomist/doc/sphinx/auto_examples/volumetest.rst' for the build.
looking for now-outdated files... none found
pickling environment... Consolidate compiler generated dependencies of target AimsLabelReorder
[ 80%] Built target AimsInterlaceVolumes
[ 80%] Built target AimsInterpolate
[ 80%] Built target AimsLabelReorder
Consolidate compiler generated dependencies of target AimsMaskContour
Preprocessing /casa/host/build/include/aims/estimation/wlms-estimator.h...
Parsing file /casa/host/build/include/aims/estimation/wlms-estimator.h...
Preprocessing /casa/host/build/include/aims/fastComputation/tabulation.h...
Parsing file /casa/host/build/include/aims/fastComputation/tabulation.h...
Preprocessing /casa/host/build/include/aims/fibers/fiberDistance.h...
Parsing file /casa/host/build/include/aims/fibers/fiberDistance.h...
Preprocessing /casa/host/build/include/aims/ffd/tabulSpline.h...
Parsing file /casa/host/build/include/aims/ffd/tabulSpline.h...
Preprocessing /casa/host/build/include/aims/foldgraph/foldgraphattributes.h...
Parsing file /casa/host/build/include/aims/foldgraph/foldgraphattributes.h...
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Preprocessing /casa/host/build/include/aims/geodesicpath/geodesic_algorithm_dijkstra_alternative.h...
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Parsing file /casa/host/build/inConsolidate compiler generated dependencies of target AimsMergeFFDLabels
[ 80%] Built target AimsMaskContour
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Prepro/casa/host/build/include/aims/math/bspline.h:181: warning: unbalanced grouping commands
/casa/host/build/include/aims/math/bspline.h:193: warning: unbalanced grouping commands
[ 80%] Built target AimsMIBucketRegister
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[ 80%] Built target AimsMosaic
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cessing /casa/host/build/include/aims/math/bspline.h...
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Parsing file /casa/host/build/iConsolidate compiler generated dependencies of target AimsRebuildComp
[ 80%] Built target AimsOverlapInfo
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Preprocessing /casa/host/build/include/aims[ 80%] Built target AimsRebuildComp
Consolidate compiler generated dependencies of target AimsRgbToHsv
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[ 80%] Built target AimsRgbToHsv
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Consolidate compiler generated dependencies of target AimsSegment2Modes
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Consolidate compiler generated dependencies of target AimsSeparateComp
[ 80%] Built target AimsSamplingInfo
[ 80%] Built target AimsSegment2Modes
/casa/host/build/include/aims/resampling/masklinresampler.h:100: warning: Found ';' while parsing initializer list! (doxygen could be confused by a macro call without semicolon)
d.h...
Parsing file /casa/host/build/include/aims/registration/displacement_field.h...
Preprocessing /casa/host/build/include/aims/registration/displacement_field_d.h...
Parsing file /casa/host/build/include/aims/registration/displacement_field_d.h...
Preprocessing /casa/host/build/include/aims/registration/ffd.h...
Parsing file /casa/host/build/include/aims/registration/ffd.h...
Preprocessing /casa/host/build/include/aims/registration/minimisation.h...
Parsing file /casa/host/build/include/aims/registration/minimisation.h...
Preprocessing /casa/host/build/include/aims/registration/minimisation_d.h...
Parsing file /casa/host/build/include/aims/registration/minimisation_d.h...
Preprocessing /casa/host/build/include/aims/registration/scale_control.h...
Parsing file /casa/host/build/include/aims/registration/scale_control.h...
Preprocessing /casa/host/build/include/aims/registration/scale_control_d.h...
Parsing file /casa/host/build/include/aims/registration/scale_control_d.h...
Preprocessing /casa/host/build/include/aims/registration/transformation.h...
Parsing file /casa/host/build/include/aims/registration/transformation.h...
Preprocessing /casa/host/build/include/aims/registration/transformation_d.h...
Parsing file /casa/host/build/include/aims/registration/transformation_d.h...
Preprocessing /casa/host/build/include/aims/resampling/bucketmapsampler.h...
Parsing file /casa/host/build/include/aims/resampling/bucketmapsampler.h...
Preprocessing /casa/host/build/include/aims/resampling/cubicresampler.h...
Parsing file /casa/host/build/include/aims/resampling/cubicresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/cubicresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/cubicresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/generalsampler.h...
Parsing file /casa/host/build/include/aims/resampling/generalsampler.h...
Preprocessing /casa/host/build/include/aims/resampling/harmonicCageResampler.h...
Parsing file /casa/host/build/include/aims/resampling/harmonicCageResampler.h...
Preprocessing /casa/host/build/include/aims/resampling/linearresampler.h...
Parsing file /casa/host/build/include/aims/resampling/linearresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/linearresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/linearresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/majoritylabelresampler.h...
Parsing file /casa/host/build/include/aims/resampling/majoritylabelresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/majoritylabelresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/majoritylabelresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/masklinresampler.h...
Parsing file /casa/host/build/include/aims/resampling/masklinresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/masklinresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/masklinresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/meshToVoxelsResampler.h...
Parsing file /casa/host/build/include/aims/resampling/meshToVoxelsResampler.h...
Preprocessing /casa/host/build/include/aims/resampling/meshToVoxelsResampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/meshToVoxelsResampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/nearestneighborresampler.h...
Parsing file /casa/host/build/include/aims/resampling/nearestneighborresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/nearestneighborresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/nearestneighborresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/quadraticresampler.h...
Parsing file /casa/host/build/include/aims/resampling/quadraticresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/quadraticresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/quadraticresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/quarticresampler.h...
Parsing fil[ 80%] Built target AimsSeparateComp
Consolidate compiler generated dependencies of target AimsStereotaxy
Consolidate compiler generated dependencies of target AimsStereologySampling
e /casa/host/build/include/aims/resampling/quarticresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/quarticresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/quarticresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/quinticresampler.h...
Parsing file /casa/host/build/include/aims/resampling/quinticresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/quinticresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/quinticresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/resampling_g.h...
Parsing file /casa/host/build/include/aims/resampling/resampling_g.h...
Preprocessing /casa/host/build/include/aims/resampling/resampler.h...
Parsing file /casa/host/build/include/aims/resampling/resampler.h...
Preprocessing /casa/host/build/include/aims/resampling/resampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/resampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/resamplerfactory.h...
Parsing file /casa/host/build/include/aims/resampling/resamplerfactory.h...
Preprocessing /casa/host/build/include/aims/resampling/resamplerfactory_d.h...
Parsing file /casa/host/build/include/aims/resampling/resamplerfactory_d.h...
Preprocessing /casa/host/build/include/aims/resampling/extremadifferencesubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/extremadifferencesubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/majoritysubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/majoritysubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/maxsubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/maxsubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/meansubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/meansubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/medianresampler.h...
Parsing file /casa/host/build/include/aims/resampling/medianresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/medianresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/medianresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/mediansubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/mediansubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/minsubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/minsubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/notnullmeansubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/notnullmeansubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/notnullmediansubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/notnullmediansubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/sumsubsampling.h...
Parsing file /casa/host/build/include/aims/resampling/sumsubsampling.h...
Preprocessing /casa/host/build/include/aims/resampling/samplable.h...
Parsing file /casa/host/build/include/aims/resampling/samplable.h...
Preprocessing /casa/host/build/include/aims/resampling/samplable_cone.h...
Parsing file /casa/host/build/include/aims/resampling/samplable_cone.h...
Preprocessing /casa/host/build/include/aims/resampling/samplable_sphere.h...
Parsing file /casa/host/build/include/aims/resampling/samplable_sphere.h...
Preprocessing /casa/host/build/include/aims/resampling/sampler.h...
Parsing file /casa/host/build/include/aims/resampling/sampler.h...
Preprocessing /casa/host/build/include/aims/resampling/sixthorderresampler.h...
Parsing file /casa/host/build/include/aims/resampling/sixthorderresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/sixthorderresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/sixthorderresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/seventhorderresampler.h...
Parsing file /casa/host/build/include/aims/resampling/seventhorderresampler.h...
Preprocessing /casa/host/build/includConsolidate compiler generated dependencies of target AimsSubSamplingConservative
[ 80%] Built target AimsStereotaxy
[ 80%] Built target AimsStereologySampling
[ 80%] Built target AimsSubSamplingConservative
Consolidate compiler generated dependencies of target AimsSeededWatershed
Consolidate compiler generated dependencies of target AimsWatershed
/casa/host/build/include/aims/signalfilter/elementfilterfactory.h:94: warning: File ended in the middle of a comment block! Perhaps a missing \endcode?
e/aims/resampling/seventhorderresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/seventhorderresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/splineresampler.h...
Parsing file /casa/host/build/include/aims/resampling/splineresampler.h...
Preprocessing /casa/host/build/include/aims/resampling/splineresampler_d.h...
Parsing file /casa/host/build/include/aims/resampling/splineresampler_d.h...
Preprocessing /casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h...
Parsing file /casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h...
Preprocessing /casa/host/build/include/aims/resampling/polynomial.h...
Parsing file /casa/host/build/include/aims/resampling/polynomial.h...
Preprocessing /casa/host/build/include/aims/roi/clusterArg.h...
Parsing file /casa/host/build/include/aims/roi/clusterArg.h...
Preprocessing /casa/host/build/include/aims/roi/clusterArg_d.h...
Parsing file /casa/host/build/include/aims/roi/clusterArg_d.h...
Preprocessing /casa/host/build/include/aims/roi/roigtm.h...
Parsing file /casa/host/build/include/aims/roi/roigtm.h...
Preprocessing /casa/host/build/include/aims/roi/roistat.h...
Parsing file /casa/host/build/include/aims/roi/roistat.h...
Preprocessing /casa/host/build/include/aims/roi/roiselector.h...
Parsing file /casa/host/build/include/aims/roi/roiselector.h...
Preprocessing /casa/host/build/include/aims/scalespace/bucketblob.h...
Parsing file /casa/host/build/include/aims/scalespace/bucketblob.h...
Preprocessing /casa/host/build/include/aims/scalespace/bucketblob_d.h...
Parsing file /casa/host/build/include/aims/scalespace/bucketblob_d.h...
Preprocessing /casa/host/build/include/aims/scalespace/meshBlob.h...
Parsing file /casa/host/build/include/aims/scalespace/meshBlob.h...
Preprocessing /casa/host/build/include/aims/scalespace/meshDiffuse.h...
Parsing file /casa/host/build/include/aims/scalespace/meshDiffuse.h...
Preprocessing /casa/host/build/include/aims/signalfilter/signalfilter_g.h...
Parsing file /casa/host/build/include/aims/signalfilter/signalfilter_g.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convol.h...
Parsing file /casa/host/build/include/aims/signalfilter/convol.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convolutionfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/convolutionfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/convolutionfilter_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/convolutionfilter_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/differencefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/differencefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/diffusionSmoother_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/diffusionSmoother_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/diffusionSmoother.h...
Parsing file /casa/host/build/include/aims/signalfilter/diffusionSmoother.h...
Preprocessing /casa/host/build/include/aims/signalfilter/elementfilterfactory.h...
Parsing file /casa/host/build/include/aims/signalfilter/elementfilterfactory.h...
Preprocessing /casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb.h...
Preprocessing /casa/host/build/inc[ 80%] Built target AimsWatershed
[ 80%] Built target AimsSeededWatershed
Consolidate compiler generated dependencies of target bioCellBoundingBoxesGenerate
reading sources... [ 90%] api/utils
done
checking consistency... done
preparing documents... Consolidate compiler generated dependencies of target bioClusterStatistics
Consolidate compiler generated dependencies of target bioCellEvaluate
[ 80%] Built target bioCellBoundingBoxesGenerate
lude/aims/signalfilter/filteringfunction_element_rgb_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_element_rgb_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringfunction_linear_rgb_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/filteringimagealgorithm.h...
Parsing file /casa/host/build/include/aims/signalfilter/filteringimagealgorithm.h...
Preprocessing /casa/host/build/include/aims/signalfilter/firfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/firfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/g2dsmooth.h...
Parsing file /casa/host/build/include/aims/signalfilter/g2dsmooth.h...
Preprocessing /casa/host/build/include/aims/signalfilter/g3dsmooth.h...
Parsing file /casa/host/build/include/aims/signalfilter/g3dsmooth.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gaborfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/gaborfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gcoef.h...
Parsing file /casa/host/build/include/aims/signalfilter/gcoef.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gcolumns.h...
Parsing file /casa/host/build/include/aims/signalfilter/gcolumns.h...
Preprocessing /casa/host/build/include/aims/signalfilter/ghessian.h...
Parsing file /casa/host/build/include/aims/signalfilter/ghessian.h...
Preprocessing /casa/host/build/include/aims/signalfilter/glines.h...
Parsing file /casa/host/build/include/aims/signalfilter/glines.h...
Preprocessing /casa/host/build/include/aims/signalfilter/grecurse.h...
Parsing file /casa/host/build/include/aims/signalfilter/grecurse.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gslices.h...
Parsing file /casa/host/build/include/aims/signalfilter/gslices.h...
Preprocessing /casa/host/build/include/aims/signalfilter/parity.h...
Parsing file /casa/host/build/include/aims/signalfilter/parity.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gjacobian.h...
Parsing file /casa/host/build/include/aims/signalfilter/gjacobian.h...
Preprocessing /casa/host/build/include/aims/signalfilter/ggradient.h...
Parsing file /casa/host/build/include/aims/signalfilter/ggradient.h...
Preprocessing /casa/host/build/include/aims/signalfilter/gframes.h...
Parsing file /casa/host/build/include/aims/signalfilter/gframes.h...
Preprocessing /casa/host/build/include/aims/signalfilter/medianfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/medianfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/meanfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/meanfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/minfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/minfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/maxfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/maxfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/majorityfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/majorityfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/movingaveragefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/movingaveragefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/sumfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/sumfilter.h...
Preprocessing /casa/host/build/include/aims/s/casa/host/build/include/aims/signalfilter/linearfilterfactory.h:76: warning: File ended in the middle of a comment block! Perhaps a missing \endcode?
done
writing output... [  2%] ana_notebook
[ 80%] Built target bioClusterStatistics
ignalfilter/variancefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/variancefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/sdfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/sdfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/iirfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/iirfilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/linearfilterfactory.h...
Parsing file /casa/host/build/include/aims/signalfilter/linearfilterfactory.h...
Preprocessing /casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/splinefilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/splinefilter.h...
Preprocessing /casa/host/build/include/aims/signalfilter/splinefilter_d.h...
Parsing file /casa/host/build/include/aims/signalfilter/splinefilter_d.h...
Preprocessing /casa/host/build/include/aims/signalfilter/types.h...
Parsing file /casa/host/build/include/aims/signalfilter/types.h...
Preprocessing /casa/host/build/include/aims/signalfilter/vfilter.h...
Parsing file /casa/host/build/include/aims/signalfilter/vfilter.h...
Preprocessing /casa/host/build/include/aims/spam/spam.h...
Parsing file /casa/host/build/include/aims/spam/spam.h...
Preprocessing /casa/host/build/include/aims/talairach/cramer.h...
Parsing file /casa/host/build/include/aims/talairach/cramer.h...
Preprocessing /casa/host/build/include/aims/talairach/talPoints.h...
Parsing file /casa/host/build/include/aims/talairach/talPoints.h...
Preprocessing /casa/host/build/include/aims/talairach/talairach.h...
Parsing file /casa/host/build/include/aims/talairach/talairach.h...
Preprocessing /casa/host/build/include/aims/talairach/talACPCNorm.h...
Parsing file /casa/host/build/include/aims/talairach/talACPCNorm.h...
Preprocessing /casa/host/build/include/aims/talairach/talBoxBase.h...
Parsing file /casa/host/build/include/aims/talairach/talBoxBase.h...
Preprocessing /casa/host/build/include/aims/talairach/talBox.h...
Parsing file /casa/host/build/include/aims/talairach/talBox.h...
Preprocessing /casa/host/build/include/aims/talairach/talVolume.h...
Parsing file /casa/host/build/include/aims/talairach/talVolume.h...
Preprocessing /casa/host/build/include/aims/talairach/talBoundingBoxPoints.h...
Parsing file /casa/host/build/include/aims/talairach/talBoundingBoxPoints.h...
Preprocessing /casa/host/build/include/aims/threshold/emthreshold.h...
Parsing file /casa/host/build/include/aims/threshold/emthreshold.h...
Preprocessing /casa/host/build/include/aims/topology/adjacency.h...
Parsing file /casa/host/build/include/aims/topology/adjacency.h...
Preprocessing /casa/host/build/include/aims/topology/cc18adjacent.h...
Parsing file /casa/host/build/include/aims/topology/cc18adjacent.h...
Preprocessing /casa/host/build/include/aims/topology/cc26adjacent.h...
Parsing file /casa/host/build/include/aims/topology/cc26adjacent.h...
Preprocessing /casa/host/build/include/aims/topology/cc6adjacent.h...
Parsing file /casa/host/build/include/aims/topology/cc6adjacent.h...
Preprocessing /casa/host/build/include/aims/topology/classifMeaning.h...
Parsing file /casa/host/build/include/aims/topology/classifMeaning.h...
Preprocessing /casa/host/build/include/aims/topology/components.h...
Parsing file /casa/host/build/include/aims/topology/components.h...
Preprocessing /casa/host/build/include/aims/topology/components18.h...
Parsing file /casa/host/build/include/aims/topology/components18.h...
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Reading tag file '/casa/host/&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
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&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator*() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator-&gt;() const

&lt;unknown&gt;:1: warning: documented symbol 'const const_LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator==(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator!=(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &amp;other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::volume() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator*()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator-&gt;()

&lt;unknown&gt;:1: warning: documented symbol 'LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator==(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator!=(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::volume() const

writing output... [  7%] auto_examples/addMenuEntry
/casa/host/build/include/aims/histogram/cumulated.h:72: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:83: warning: member doit belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/histogram/cumulated.h:105: warning: member valueForPercentage belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:457: warning: member X belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:506: warning: member Y belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:539: warning: member Z belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:572: warning: member T belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:607: warning: member XX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:612: warning: member XY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:617: warning: member XZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:622: warning: member XT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:628: warning: member YX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:633: warning: member YY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:638: warning: member YZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:643: warning: member YT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:649: warning: member ZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:654: warning: member ZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:659: warning: member ZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:664: warning: member ZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:670: warning: member TX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:675: warning: member TY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:680: warning: member TZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:685: warning: member TT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:693: warning: member XXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:698: warning: member XXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:703: warning: member XXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:708: warning: member XXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:714: warning: member XYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:719: warning: member XYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:724: warning: member XYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:729: warning: member XYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:735: warning: member XZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:740: warning: member XZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:745: warning: member XZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:750: warning: member XZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:756: warning: member XTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:761: warning: member XTY belongs to two different groups. The second one found here will be ignored.
[ 86%] Generating EcatVolReverse help file ...
/casa/host/build/include/aims/math/gradient.h:766: warning: member XTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:771: warning: member XTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:777: warning: member YXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:782: warning: member YXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:787: warning: member YXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:792: warning: member YXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:798: warning: member YYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:803: warning: member YYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:808: warning: member YYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:813: warning: member YYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:819: warning: member YZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:824: warning: member YZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:829: warning: member YZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:834: warning: member YZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:840: warning: member YTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:845: warning: member YTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:850: warning: member YTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:855: warning: member YTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:861: warning: member ZXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:866: warning: member ZXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:871: warning: member ZXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:876: warning: member ZXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:882: warning: member ZYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:887: warning: member ZYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:892: warning: member ZYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:897: warning: member ZYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:903: warning: member ZZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:908: warning: member ZZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:913: warning: member ZZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:918: warning: member ZZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:924: warning: member ZTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:929: warning: member ZTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:934: warning: member ZTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:939: warning: member ZTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:945: warning: member TXX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:950: warning: member TXY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:955: warning: member TXZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:960: warning: member TXT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:966: warning: member TYX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:971: warning: member TYY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:976: warning: member TYZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:981: warning: member TYT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:987: warning: member TZX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:992: warning: member TZY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:997: warning: member TZZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1002: warning: member TZT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1008: warning: member TTX belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1013: warning: member TTY belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1018: warning: member TTZ belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/gradient.h:1023: warning: member TTT belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:93: warning: member UniformRandom belongs to two different groups. The second one found here will be ignored.
/casa/host/build/include/aims/math/random.h:144: warning: member GaussianRandom belongs to two different groups. The second one found here will be ignored.
writing output... [  9%] auto_examples/aimsvolumetest
/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:66: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionSubSampler&lt; F &gt;::ConvolutionSubSampler(const F &amp;f, unsigned r)
Possible candidates:
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(unsigned r=2)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const Point4du &amp;r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const BasisFunction &amp;bfunc, unsigned r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;(), const Point4du &amp;r=Point4du(2, 2, 2, 2))'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const ConvolutionSubSampler &amp;other)'

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:76: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionSubSampler&lt; F &gt;::ConvolutionSubSampler(const std::vector&lt; F &gt; &amp;f, const Point4du &amp;r)
Possible candidates:
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(unsigned r=2)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const Point4du &amp;r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const BasisFunction &amp;bfunc, unsigned r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;(), const Point4du &amp;r=Point4du(2, 2, 2, 2))'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const ConvolutionSubSampler &amp;other)'

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:87: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionSubSampler&lt; F &gt;::ConvolutionSubSampler(const aims::ConvolutionSubSampler&lt; F &gt; &amp;other)
Possible candidates:
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(unsigned r=2)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const Point4du &amp;r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const BasisFunction &amp;bfunc, unsigned r)'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;(), const Point4du &amp;r=Point4du(2, 2, 2, 2))'
  'aims::ConvolutionSubSampler&lt; BasisFunction &gt;::ConvolutionSubSampler(const ConvolutionSubSampler &amp;other)'

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:284: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionSubSampler&lt; F &gt;::setBasisFunction(const F &amp;func)
Possible candidates:
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h

/casa/host/build/include/aims/pyramid/convolutionsubsampler_d.h:290: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionSubSampler&lt; F &gt;::setBasisFunction(const std::vector&lt; F &gt; &amp;func)
Possible candidates:
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 95 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h
  'void aims::ConvolutionSubSampler&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 96 of file /casa/host/build/include/aims/pyramid/convolutionsubsampler.h

/casa/host/build/include/aims/resampling/masklinresampler_d.h:59: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::MaskLinearResampler::doResample(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform, const T &amp;background, const Point3df &amp;output_location, T &amp;output_value, int t) const

/casa/host/build/include/aims/resampling/masklinresampler_d.h:107: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::MaskLinearResampler::resample(const carto::Volume&lt; T &gt; &amp;input_data, const aims::AffineTransformation3d &amp;motion, const T &amp;background, carto::Volume&lt; T &gt; &amp;thing, bool verbose) const

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:49: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionFilter&lt; F &gt;::ConvolutionFilter(const F &amp;f)
Possible candidates:
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const BasisFunction &amp;bfunc)'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;())'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const ConvolutionFilter &amp;other)'

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:58: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionFilter&lt; F &gt;::ConvolutionFilter(const std::vector&lt; F &gt; &amp;f)
Possible candidates:
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const BasisFunction &amp;bfunc)'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;())'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const ConvolutionFilter &amp;other)'

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:67: warning: no matching class member found for 
  template &lt; F &gt;
  aims::ConvolutionFilter&lt; F &gt;::ConvolutionFilter(const aims::ConvolutionFilter&lt; F &gt; &amp;other)
Possible candidates:
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const BasisFunction &amp;bfunc)'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const std::vector&lt; BasisFunction &gt; &amp;bfunc=std::vector&lt; BasisFunction &gt;())'
  'aims::ConvolutionFilter&lt; BasisFunction &gt;::ConvolutionFilter(const ConvolutionFilter &amp;other)'

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:231: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionFilter&lt; F &gt;::setBasisFunction(const F &amp;func)
Possible candidates:
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h

/casa/host/build/include/aims/signalfilter/convolutionfilter_d.h:237: warning: no uniquely matching class member found for 
  template &lt; F &gt;
  void aims::ConvolutionFilter&lt; F &gt;::setBasisFunction(const std::vector&lt; F &gt; &amp;func)
Possible candidates:
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const BasisFunction &amp;func)' at line 97 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h
  'void aims::ConvolutionFilter&lt; BasisFunction &gt;::setBasisFunction(const std::vector&lt; BasisFunction &gt; &amp;func)' at line 99 of file /casa/host/build/include/aims/signalfilter/convolutionfilter.h

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:58: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::ElementFilterFactory::init()

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:85: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::map&lt; std::string, carto::rc_ptr&lt; ElementFilteringImageAlgorithm&lt; T &gt; &gt; &gt; &amp; aims::ElementFilterFactory::_map()

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:92: warning: documented symbol 'void aims::ElementFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:102: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::set&lt; std::string &gt; aims::ElementFilterFactory::names()

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:113: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  ElementFilteringImageAlgorithm&lt; T &gt; * aims::ElementFilterFactory::create(const std::string &amp;name, const StructuringElement &amp;strel, carto::Object options)

/casa/host/build/include/aims/signalfilter/elementfilterfactory_d.h:131: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  ElementFilteringImageAlgorithm&lt; T &gt; * aims::ElementFilterFactory::create(const std::string &amp;name, carto::Object options)

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:142: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MaxFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:148: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MaxFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:161: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MinFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:167: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MinFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:180: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:186: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:199: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:205: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMedianFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:218: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:224: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:237: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:243: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMeanFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:256: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:262: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::MajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:275: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:281: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::NotNullMajorityFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:294: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:300: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::ExtremaDifferenceFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:313: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::SumFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:319: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::SumFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:332: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::VarFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:338: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::VarFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:351: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::StDevFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/filteringfunction_element_d.h:357: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::StDevFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:125: warning: documented symbol 'aims::GaborFilterFunc::GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:141: warning: documented symbol 'aims::GaborFilterFunc::~GaborFilterFunc' was not declared or defined.
/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:145: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  GaborFilterFunc&lt; T &gt; &amp; aims::GaborFilterFunc::operator=(const GaborFilterFunc&lt; T &gt; &amp;other)

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:164: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::GaborFilterFunc::setOptions(const carto::Object &amp;options)

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:214: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::GaborFilterFunc::updateOptions(const carto::Object &amp;options)

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:291: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  const std::vector&lt; int &gt; &amp; aims::GaborFilterFunc::getAmplitude() const

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:297: warning: no matching file member found for 
void aims::GaborFilterFunc::setKernel
Possible candidates:
 'void setKernel()' at line 150 of file /casa/host/build/include/aims/signalfilter/filteringfunction_linear.h

/casa/host/build/include/aims/signalfilter/filteringfunction_linear_d.h:357: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  T aims::GaborFilterFunc::execute(const carto::VolumeRef&lt; T &gt; &amp;volume) const

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:46: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  void aims::LinearFilterFactory::init()

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:58: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::map&lt; std::string, carto::rc_ptr&lt; LinearFilteringImageAlgorithm&lt; T &gt; &gt; &gt; &amp; aims::LinearFilterFactory::_map()

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:65: warning: documented symbol 'void aims::LinearFilterFactory::registerFilter' was not declared or defined.
/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:75: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  std::set&lt; std::string &gt; aims::LinearFilterFactory::names()

/casa/host/build/include/aims/signalfilter/linearfilterfactory_d.h:86: warning: no uniquely matching class member found for 
  template &lt; T &gt;
  LinearFilteringImageAlgorithm&lt; T &gt; * aims::LinearFilterFactory::create(const std::string &amp;name, carto::Object options)

writing output... [ 12%] auto_examples/anaevensimplerviewer
[ 86%] Generating AimsRTiff help file ...
writing output... [ 14%] auto_examples/anagraphannotate
build/share/doc/aimsdata-5.1/doxygen/aimsdata.tag', location '../../aimsdata-5.1/doxygen'...
Reading tag file '/casa/host/build/share/doc/graph-5.1/doxygen/graph.tag', location '../../graph-5.1/doxygen'...
Reading tag file '/casa/host/build/share/doc/cartobase-5.1/doxygen/cartobase.tag', location '../../cartobase-5.1/doxygen'...
Reading tag file '/casa/host/build/share/doc/soma-io-5.1/doxygen/soma-io.tag', location '../../cartobase-5.1/doxygen'...
Reading tag file '/casa/host/build/share/doc/cartodata-5.1/doxygen/cartodata.tag', location '../../cartodata-5.1/doxygen'...
Parsing files
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Parsing file /casa/host/build/include/anatomist/application/anatomistinfo.h...
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Preprocessing /casa/host/build/include/anatomist/application/globalConfig.h...
Parsing file /casa/host/build/include/anatomist/application/globalConfig.h...
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Parsing file /casa/host/build/include/anatomist/application/localConfig.h...
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Preprocessing /casa/host/build/include/anatomist/commands/cFusion2DParams.h..writing output... [ 17%] auto_examples/anatomistapiTests
.
Parsing file /casa/host/build/include/anatomist/commands/cFusion2DParams.h...
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Parsing file /casa/host/build/include/anatomist/mobject/globjectvector.h...
Preprocessing /casa/host/build/include/anatomist/mobject/glmobject.h...
Parsing file /casa/host/build/include/anatomist/mobject/glmobject.h...
Preprocessing /casa/host/build/include/anatomist/mobject/objectVector.h...
Parsing file /casa/host/build/include/anatomist/mobject/objectVector.h...
Preprocessing /casa/host/build/include/anatomist/mobject/MObject.h...
Parsing file /casa/host/build/include/anatomist/mobject/MObject.h...
Preprocessing /casa/host/build/include/anatomist/mobject/Fusion2D.h...
Parsing file /casa/host/build/include/anatomist/mobject/Fusion2D.h...
Preprocessing /casa/host/build/include/anatomist/mobject/Fusion3D.h...
Parsing file /casa/host/build/include/anatomist/mobject/Fusion3D.h...
Preprocessing /casa/host/build/include/anatomist/mobject/ObjectList.h...
Parsing file /casa/host/build/include/anatomist/mobject/ObjectList.h...
Preprocessing /casa/host/build/include/anatomist/mobject/wFusion2D.h...
Parsing file /casa/host/build/include/anatomist/mobject/wFusion2D.h...
Preprocessing /casa/host/build/include/anatomist/mobject/wFusion3D.h...
Parsing file /casa/host/build/include/anatomist/mobject/wFusion3D.h...
Preprocessing /casa/host/build/include/anatomist/volume/slice.h...
Parsing file /casa/host/build/include/anatomist/volume/slice.h...
Preprocessing /casa/host/build/include/anatomist/volume/Volume.h...
Parsing file /casa/host/build/include/anatomist/volume/Volume.h...
Preprocessing /casa/host/build/include/anatomist/volume/volumeview.h...
Parsing file /casa/host/build/include/anatomist/volume/volumeview.h...
Preprocessing /casa/host/build/include/anatomist/processor/context.h...
Parsing file /casa/host/build/include/anatomist/processor/context.h...
Preprocessing /casa/host/build/include/anatomist/processor/errormessage.h...
Parsing file /casa/host/build/include/anatomist/processor/errormessage.h...
Preprocessing /casa/host/build/include/anatomist/processor/event.h...
Parsing file /casa/host/build/include/anatomist/processor/event.h...
Preprocessing /casa/host/build/include/anatomist/processor/event_doc.h...
Parsing file /casa/host/build/include/anatomist/processor/event_doc.h...
Preprocessing /casa/host/build/include/anatomist/processor/pipeReader.h...
Parsing file /casa/host/build/include/anatomist/processor/pipeReader.h...
Preprocessing /casa/host/build/include/anatomist/processor/pipeReaderP.h...
Parsing file /casa/host/build/include/anatomist/processor/pipeReaderP.h...
Preprocessing /casa/host/build/include/anatomist/processor/unserializer.h...
Parsing file /casa/host/build/include/anatomist/processor/unserializer.h...
Preprocessing /casa/host/build/include/anatomist/processor/server.h...
Parsing file /casa/host/build/include/anatomist/processor/server.h...
Preprocessing /casa/host/build/include/anatomist/processor/Command.h...
Parsing file /casa/host/build/include/anatomist/procewriting output... [ 21%] auto_examples/control
ssor/Command.h...
Preprocessing /casa/host/build/include/anatomist/processor/Processor.h...
Parsing file /casa/host/build/include/anatomist/processor/Processor.h...
Preprocessing /casa/host/build/include/anatomist/processor/Registry.h...
Parsing file /casa/host/build/include/anatomist/processor/Registry.h...
Preprocessing /casa/host/build/include/anatomist/processor/Reader.h...
Parsing file /casa/host/build/include/anatomist/processor/Reader.h...
Preprocessing /casa/host/build/include/anatomist/processor/Writer.h...
Parsing file /casa/host/build/include/anatomist/processor/Writer.h...
Preprocessing /casa/host/build/include/anatomist/processor/Serializer.h...
Parsing file /casa/host/build/include/anatomist/processor/Serializer.h...
Preprocessing /casa/host/build/include/anatomist/fusion/defFusionMethods.h...
Parsing file /casa/host/build/include/anatomist/fusion/defFusionMethods.h...
Preprocessing /casa/host/build/include/anatomist/fusion/fusionFactory.h...
Parsing file /casa/host/build/include/anatomist/fusion/fusionFactory.h...
Preprocessing /casa/host/build/include/anatomist/fusion/fusionChooser.h...
Parsing file /casa/host/build/include/anatomist/fusion/fusionChooser.h...
Preprocessing /casa/host/build/include/anatomist/stdmod/stdmod.h...
Parsing file /casa/host/build/include/anatomist/stdmod/stdmod.h...
Preprocessing /casa/host/build/include/anatomist/sparsematrix/connectivitymatrix.h...
Parsing file /casa/host/build/include/anatomist/sparsematrix/connectivitymatrix.h...
Preprocessing /casa/host/build/include/anatomist/sparsematrix/sparsematrix.h...
Parsing file /casa/host/build/include/anatomist/sparsematrix/sparsematrix.h...
Preprocessing /casa/host/build/include/anatomist/primitive/primitive.h...
Parsing file /casa/host/build/include/anatomist/primitive/primitive.h...
Preprocessing /casa/host/build/include/anatomist/constrainteditor/wConstraintEditor.h...
Parsing file /casa/host/build/include/anatomist/constrainteditor/wConstraintEditor.h...
Preprocessing /casa/host/build/include/anatomist/action/nodeselectionaction.h...
Parsing file /casa/host/build/include/anatomist/action/nodeselectionaction.h...
Preprocessing /casa/host/build/include/anatomist/control/nodeselectioncontrol.h...
Parsing file /casa/host/build/include/anatomist/control/nodeselectioncontrol.h...
Preprocessing /casa/host/build/include/anatomist/control/listboxeditor.h...
Parsing file /casa/host/build/include/anatomist/control/listboxeditor.h...
Preprocessing /casa/host/build/include/anatomist/application/hierarchyeditor.h...
Parsing file /casa/host/build/include/anatomist/application/hierarchyeditor.h...
Preprocessing /casa/host/build/include/anatomist/erpio/erpR.h...
Parsing file /casa/host/build/include/anatomist/erpio/erpR.h...
Preprocessing /casa/host/build/include/anatomist/erpio/erpWraper.h...
Parsing file /casa/host/build/include/anatomist/erpio/erpWraper.h...
Preprocessing /casa/host/build/include/anatomist/interface/qwSurfMatch.h...
Parsing file /casa/host/build/include/anatomist/interface/qwSurfMatch.h...
Preprocessing /casa/host/build/include/anatomist/interpoler/interpolMethod.h...
Parsing file /casa/host/build/include/anatomist/interpoler/interpolMethod.h...
Preprocessing /casa/host/build/include/anatomist/interpoler/interpoler.h...
Parsing file /casa/host/build/include/anatomist/interpoler/interpoler.h...
Preprocessing /casa/host/build/include/anatomist/landmark/landmFactory.h...
Parsing file /casa/host/build/include/anatomist/landmark/landmFactory.h...
Preprocessing /casa/host/build/include/anatomist/landmark/landmPicker.h...
Parsing file /casa/host/build/include/anatomist/landmark/landmPicker.h...
Preprocessing /casa/host/build/include/anatomist/landmark/plane.h...
Parsing file /casa/host/build/include/anatomist/landmark/plane.h...
Preprocessing /casa/host/build/include/anatomist/landmark/graphLandmark.h...
Parsing file /casa/host/build/include/anatomist/landmark/graphLandmark.h...
Preprocessing /casa/host/build/include/anatomist/surfmatcher/surfMatchMethod.h...
Parsing file /casa/host/build/include/anatomist/surfmatcher/surfMatchMethod.h...
Preprocessing /casa/host/build/include/anatomist/surfmatcher/surfMatcher.h...
Parsing file /casa/host/build/include/anatomist/surfmatcher/surfMatcher.h...
Preprocessing /casa/host/build/include/anatomist/module/anasurfmatch.h...
Parsing file /casa/host/build/include/anatomist/module/anasurfmatch.h...
Preprocessing /casa/host/build/include/anatomist/module/surfpaintmodule.h...
Parsing file /casa/host/build/include/anatomist/module/surfpaintmodule.h...
Preprocessing /casa/host/build/include/anatomist/module/surfpainttools.h...
Parsing file /casa/host/build/include/anatomist/module/surfpainttools.h...
Preprocessing /casa/host/build/include/anatomist/action/surfpaintaction.h...
Parsing file /casa/host/build/include/anatomist/action/surfpaintaction.h...
Preprocessing /casa/host/build/include/anatomist/control/surfpaintcontrol.h...
Parsing file /casa/host/build/include/anatomist/control/surfpaintcontrol.h...
Preprocessing /casa/host/build/include/anatomist/module/volrenderfusionmethod.h...
Parsing file /casa/host/build/include/anatomist/module/volrenderfusionmethod.h...
Preprocessing /casa/host/build/include/anatomist/module/volrendermodule.h...
Parsing file /casa/host/build/include/anatomist/module/volrendermodule.h...
Preprocessing /casa/host/build/include/anatomist/object/volrender.h...
Parsing file /casa/host/build/include/anatomist/object/volrender.h...
Preprocessing /casa/host/build/include/anatomist/object/volrenderpanel.h...
Parsing file /casa/host/build/include/anatomist/object/volrenderpanel.h...
Preprocessing /casa/host/build/include/anatomist/object/volrendershader.h...
Parsing file /casa/host/build/include/anatomist/object/volrendershader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/creator.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/creator.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/cubeZbuffer.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/cubeZbuffer.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/mipShader.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/mipShader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/mpvrShader.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/mpvrShader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/rfmtShader.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/rfmtShader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/shader.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/shader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/shaderFactory.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/shaderFactory.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/slicing.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/slicing.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/sumShader.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/sumShader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/vector3d.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/vector3d.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/vrShader.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/vrShader.h...
Preprocessing /casa/host/build/include/anatomist/qtvr3/vrsingleton.h...
Parsing file /casa/host/build/include/anatomist/qtvr3/vrsingleton.h...
Preprocessing /casa/host/build/include/anatomist/winprof/profFactory.h...
Parsing file /casa/host/build/include/anatomist/winprof/profFactory.h...
Preprocessing /casa/host/build/include/anatomist/winprof/profStrategy.h...
Parsing file /casa/host/build/include/anatomist/winprof/profStrategy.h...
Preprocessing /casa/host/build/include/anatomist/winprof/profT.h...
Parsing file /casa/host/build/include/anatomist/winprof/profT.h...
Preprocessing /casa/host/build/include/anatomist/winprof/profWin.h...
Parsing file /casa/host/build/include/anatomist/winprof/profWin.h...
Preprocessing /casa/host/build/include/anatomist/winprof/profX.h...
Parsing file /casa/host/build/include/anatomist/winprof/profX.h...
Preprocessing /casa/host/build/in/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
writing output... [ 24%] auto_examples/customcommands
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
clude/anatomist/winprof/profY.h...
Parsing file /casa/host/build/include/anatomist/winprof/profY.h...
Preprocessing /casa/host/build/include/anatomist/winprof/profZ.h...
Parsing file /casa/host/build/include/anatomist/winprof/profZ.h...
Preprocessing /casa/host/build/include/anatomist/module/profile.h...
Parsing file /casa/host/build/include/anatomist/module/profile.h...
Preprocessing /casa/host/build/include/anatomist/action/levelsetaction.h...
Parsing file /casa/host/build/include/anatomist/action/levelsetaction.h...
Preprocessing /casa/host/build/include/anatomist/action/labelnaming.h...
Parsing file /casa/host/build/include/anatomist/action/labelnaming.h...
Preprocessing /casa/host/build/include/anatomist/action/roichangeprocessor.h...
Parsing file /casa/host/build/include/anatomist/action/roichangeprocessor.h...
Preprocessing /casa/host/build/include/anatomist/action/paintaction.h...
Parsing file /casa/host/build/include/anatomist/action/paintaction.h...
Preprocessing /casa/host/build/include/anatomist/action/histoplot.h...
Parsing file /casa/host/build/include/anatomist/action/histoplot.h...
Preprocessing /casa/host/build/include/anatomist/action/blobsegmentation.h...
Parsing file /casa/host/build/include/anatomist/action/blobsegmentation.h...
Preprocessing /casa/host/build/include/anatomist/control/paintcontrol.h...
Parsing file /casa/host/build/include/anatomist/control/paintcontrol.h...
Preprocessing /casa/host/build/include/anatomist/control/levelsetcontrol.h...
Parsing file /casa/host/build/include/anatomist/control/levelsetcontrol.h...
Preprocessing /casa/host/build/include/anatomist/control/labelnamingcontrol.h...
Parsing file /casa/host/build/include/anatomist/control/labelnamingcontrol.h...
Preprocessing /casa/host/build/include/anatomist/action/roimanagementaction.h...
Parsing file /casa/host/build/include/anatomist/action/roimanagementaction.h...
Preprocessing /casa/host/build/include/anatomist/control/roimanagementcontrol.h...
Parsing file /casa/host/build/include/anatomist/control/roimanagementcontrol.h...
Preprocessing /casa/host/build/include/anatomist/application/roibasemodule.h...
Parsing file /casa/host/build/include/anatomist/application/roibasemodule.h...
Preprocessing /casa/host/build/include/anatomist/commands/cCreateGraph.h...
Parsing file /casa/host/build/include/anatomist/commands/cCreateGraph.h...
Preprocessing /casa/host/build/include/anatomist/commands/cGetConnThres.h...
Parsing file /casa/host/build/include/anatomist/commands/cGetConnThres.h...
Preprocessing /casa/host/build/include/anatomist/commands/cSetConnThres.h...
Parsing file /casa/host/build/include/anatomist/commands/cSetConnThres.h...
Preprocessing /casa/host/build/include/anatomist/commands/cAddNode.h...
Parsing file /casa/host/build/include/anatomist/commands/cAddNode.h...
Preprocessing /casa/host/build/include/anatomist/commands/cPaintParams.h...
Parsing file /casa/host/build/include/anatomist/commands/cPaintParams.h...
Preprocessing /casa/host/build/include/anatomist/action/dynsegmentaction.h...
Parsing file /casa/host/build/include/anatomist/action/dynsegmentaction.h...
Preprocessing /casa/host/build/include/anatomist/action/morphomath.h...
Parsing file /casa/host/build/include/anatomist/action/morphomath.h...
Preprocessing /casa/host/build/include/anatomist/control/dynsegmentcontrol.h...
Parsing file /casa/host/build/include/anatomist/control/dynsegmentcontrol.h...
Preprocessing /casa/host/build/include/anatomist/application/roialgomodule.h...
Parsing file /casa/host/build/include/anatomist/application/roialgomodule.h...
Preprocessing /casa/host/build/include/anatomist/winhisto/histoWin.h...
Parsing file /casa/host/build/include/anatomist/winhisto/histoWin.h...
Preprocessing /casa/host/build/include/anatomist/winhisto/histo.h...
Parsing file /casa/host/build/include/anatomist/winhisto/histo.h...
Preprocessing /casa/host/build/include/anatomist/module/histogram.h...
Parsing file /casa/host/build/include/anatomist/module/histogram.h...
Building macro definition list...
Building group list...
Building directory list...
Builwriting output... [ 26%] auto_examples/customopenglobject
/casa/host/build/share/doc/cartobase-5.1/doxygen/cartobase.tag:1: warning: Internal inconsistency: scope for class carto::conversion::Helper::yes not found!
a/host/build/include/aims/topology/connectivity6.h...
Parsing file /casa/host/build/include/aims/topology/connectivity6.h...
Preprocessing /casa/host/build/include/aims/topology/relation.h...
Parsing file /casa/host/build/include/aims/topology/relation.h...
Preprocessing /casa/host/build/include/aims/topology/topoBase.h...
Parsing file /casa/host/build/include/aims/topology/topoBase.h...
Preprocessing /casa/host/build/include/aims/topology/topoClassif.h...
Parsing file /casa/host/build/include/aims/topology/topoClassif.h...
Preprocessing /casa/host/build/include/aims/topology/topoClassifBase.h...
Parsing file /casa/host/build/include/aims/topology/topoClassifBase.h...
Preprocessing /casa/host/build/include/aims/topology/topoClassifier.h...
Parsing file /casa/host/build/include/aims/topology/topoClassifier.h...
Preprocessing /casa/host/build/include/aims/topology/topology.h...
Parsing file /casa/host/build/include/aims/topology/topology.h...
Preprocessing /casa/host/build/include/aims/transform/fft1d.h...
Parsing file /casa/host/build/include/aims/transform/fft1d.h...
Preprocessing /casa/host/build/include/aims/transform/hilbert1d.h...
Parsing file /casa/host/build/include/aims/transform/hilbert1d.h...
Preprocessing /casa/host/build/include/aims/transform/least_square_estimation.h...
Parsing file /casa/host/build/include/aims/transform/least_square_estimation.h...
Preprocessing /casa/host/build/include/aims/transform/rigidestimation.h...
Parsing file /casa/host/build/include/aims/transform/rigidestimation.h...
Preprocessing /casa/host/build/include/aims/transform/transform_objects.h...
Parsing file /casa/host/build/include/aims/transform/transform_objects.h...
Preprocessing /casa/host/build/include/aims/transform/transform_objects_d.h...
Parsing file /casa/host/build/include/aims/transform/transform_objects_d.h...
Preprocessing /casa/host/build/include/aims/utility/dynamic.h...
Parsing file /casa/host/build/include/aims/utility/dynamic.h...
Preprocessing /casa/host/build/include/aims/utility/dynamic_d.h...
Parsing file /casa/host/build/include/aims/utility/dynamic_d.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating example documentation...
Generating file sources...
Generating code for file aims/algorithm/imagealgorithm.h...
Generating code for file aims/classification/classifstrategy.h...
Gwriting output... [ 29%] auto_examples/ellipsoid
writing output... [ 31%] auto_examples/events
writing output... [ 34%] auto_examples/fusion
writing output... [ 36%] auto_examples/fusion3D
writing output... [ 39%] auto_examples/graph
writing output... [ 41%] auto_examples/graph_building
enerating code for file aims/classification/classifstrategy_d.h...
Generating code for file aims/classification/distance.h...
Generating code for file aims/classification/distance_d.h...
Generating code for file aims/classification/dynamicstrategy.h...
Generating code for file aims/classification/dynamicstrategy_d.h...
Generating code for file aims/classification/individuals.h...
Generating code for file aims/classification/individuals_d.h...
Generating code for file aims/classification/iterativeclassification.h...
Generating code for file aims/classification/iterativeclassification_d.h...
Generating code for file aims/classification/kmeansstrategy.h...
Generating code for file aims/classification/kmeansstrategy_d.h...
Generating code for file aims/classification/mixtureOfPpca.h...
Generating code for file aims/classification/mixtureOfPpca_d.h...
Generating code for file aims/classification/pcastrategy.h...
Generating code for file aims/classification/pcastrategy_d.h...
Generating code for file aims/classification/softDecSimilarityCompAnalysis.h...
Generating code for file aims/compression/compression_g.h...
Generating code for file aims/compression/huffman.h...
Generating code for file aims/compression/lz.h...
Generating code for file aims/compression/lzhl.h...
Generating code for file aims/config/aimsalgo_config.h...
Generating code for file aims/connectivity/meshcc.h...
Generating code for file aims/connectivity/meshcc_d.h...
Generating code for file aims/distancemap/advection.h...
Generating code for file aims/distancemap/chamfer.h...
Generating code for file aims/distancemap/danielsson.h...
Generating code for file aims/distancemap/distancemap_g.h...
Generating code for file aims/distancemap/downpath.h...
Generating code for file aims/distancemap/fastmarching.h...
Generating code for file aims/distancemap/front.h...
Generating code for file aims/distancemap/mask.h...
Generating code for file aims/distancemap/meshdistance.h...
Generating code for file aims/distancemap/meshdistance_d.h...
Generating code for file aims/distancemap/meshmorphomat.h...
Generating code for file aims/distancemap/meshmorphomat_d.h...
Generating code for file aims/distancemap/meshparcellation.h...
Generating code for file aims/distancemap/meshparcellation_d.h...
Generating code for file aims/distancemap/meshvoronoi.h...
Generating code for file aims/distancemap/meshvoronoi_d.h...
Generating code for file aims/distancemap/projection.h...
Generating code for file aims/distancemap/stlsort.h...
Generating code for file aims/distancemap/thickness.h...
Generating code for file aims/distancemap/voronoi.h...
Generating code for file aims/estimation/estimation_g.h...
Generating code for file aims/estimation/gmlfunc.h...
Generating code for file aims/estimation/lms-estimator.h...
Generating code for file aims/estimation/m-estimator.h...
Generating code for file aims/estimation/m-func.h...
Generating code for file aims/estimation/medfunc.h...
Generating code for file aims/pyramid/medfunc.h...
Generating code for file aims/estimation/msfunc.h...
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writing output... [ 46%] auto_examples/meshtest
writing output... [ 48%] auto_examples/nomenclatureselection
writing output... [ 51%] auto_examples/selection
writing output... [ 53%] auto_examples/sg_execution_times
[ 86%] Generating AimsAverage help file ...
writing output... [ 56%] auto_examples/sphere
eodesicpath/geodesic_memory.h...
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Generating code for file aims/morphology/operatormorphowriting output... [ 58%] auto_examples/texturedrawing

WARNING: autodoc: failed to import class 'BundleTransformer' from module 'soma.aimsalgo'; the following exception was raised:
Traceback (most recent call last):
  File "/usr/local/lib/python3.10/dist-packages/sphinx/util/inspect.py", line 341, in safe_getattr
    return getattr(obj, name, *defargs)
AttributeError: module 'soma.aimsalgo' has no attribute 'BundleTransformer'

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "/usr/local/lib/python3.10/dist-packages/sphinx/ext/autodoc/importer.py", line 106, in import_object
    obj = attrgetter(obj, mangled_name)
  File "/usr/local/lib/python3.10/dist-packages/sphinx/ext/autodoc/__init__.py", line 324, in get_attr
    return autodoc_attrgetter(self.env.app, obj, name, *defargs)
  File "/usr/local/lib/python3.10/dist-packages/sphinx/ext/autodoc/__init__.py", line 2769, in autodoc_attrgetter
    return safe_getattr(obj, name, *defargs)
  File "/usr/local/lib/python3.10/dist-packages/sphinx/util/inspect.py", line 357, in safe_getattr
    raise AttributeError(name) from exc
AttributeError: BundleTransformer

/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo:1: WARNING: duplicate object description of soma.aimsalgo, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.getBrain:5: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.getWhite:5: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_DOUBLE:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_DOUBLE, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_DOUBLE.doit:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_DOUBLE.doit, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_FLOAT:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_FLOAT, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_S16:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_S16, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_S32:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_S32, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_U16:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_U16, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_U32:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_U32, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Gaussian3DSmoothing_U8:1: WARNING: duplicate object description of soma.aimsalgo.Gaussian3DSmoothing_U8, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher:1: WARNING: duplicate object description of soma.aimsalgo.Mesher, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.SmoothingType:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.SmoothingType, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.doit:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.doit, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.getBrain:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.getBrain, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.getBrain:5: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.getWhite:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.getWhite, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.getWhite:5: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.setDecimation:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.setDecimation, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.setSmoothing:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.setSmoothing, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.setSmoothingLaplacian:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.setSmoothingLaplacian, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Mesher.setSmoothingSpring:1: WARNING: duplicate object description of soma.aimsalgo.Mesher.setSmoothingSpring, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:7: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.resampleBucket:1: WARNING: duplicate object description of soma.aimsalgo.resampleBucket, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.transformBucketDirect:1: WARNING: duplicate object description of soma.aimsalgo.transformBucketDirect, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.transformGraph:1: WARNING: duplicate object description of soma.aimsalgo.transformGraph, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.transformMesh:1: WARNING: duplicate object description of soma.aimsalgo.transformMesh, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.correctB0:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.correctB0, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.fix_b1_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.fix_b1_map, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_B0_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.make_B0_map, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_B1_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.make_B1_map, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_B1_map:10: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_flip_angle_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.make_flip_angle_map, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_flip_angle_map:9: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.GREData2FlipAngles:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.GREData2FlipAngles, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.correct_bias:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.correct_bias, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.correct_sensitivity_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.correct_sensitivity_map, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.t1mapping_VFA:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.t1mapping_VFA, other instance in pyaims_modules_api, use :noindex: for one of them
/casa/host/build/python/soma/wip/aimsalgo/samplables/superquadricsamplable.py:docstring of soma.wip.aimsalgo.samplables.superquadricsamplable.SuperQuadricSamplable:5: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aims/apctools.py:docstring of soma.aims.apctools.apcRead:9: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'diff' from module 'soma.aims'; the following exception was raised:
No module named 'soma.aims.diff'
/casa/host/build/python/soma/aims/labelstools.py:docstring of soma.aims.labelstools.read_labels:9: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aims/labelstools.py:docstring of soma.aims.labelstools.read_labels:13: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aims/lazy_read_data.py:docstring of soma.aims.lazy_read_data.LazyReadData:55: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/soma/aims/texturetools.py:docstring of soma.aims.texturetools.vertex_texture_to_polygon_texture:14: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/mesh_coordinates_sphere_resampling.py:docstring of soma.aimsalgo.mesh_coordinates_sphere_resampling.sphere_mesh_from_distance_map:16: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/mesh_coordinates_sphere_resampling.py:docstring of soma.aimsalgo.mesh_coordinates_sphere_resampling.sphere_mesh_from_distance_map:17: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.correctB0:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.correctB0, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.fix_b1_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.fix_b1_map, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_B0_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.make_B0_map, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_B1_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.make_B1_map, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_B1_map:10: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_flip_angle_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.BAFIData.make_flip_angle_map, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.BAFIData.make_flip_angle_map:9: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.GREData2FlipAngles:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.GREData2FlipAngles, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.correct_bias:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.correct_bias, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.correct_sensitivity_map:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.correct_sensitivity_map, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/t1mapping.py:docstring of soma.aimsalgo.t1mapping.t1mapping_VFA:1: WARNING: duplicate object description of soma.aimsalgo.t1mapping.t1mapping_VFA, other instance in pyaims_aimsalgo, use :noindex: for one of them
/casa/host/build/python/soma/aimsalgo/texture_cleaning.py:docstring of soma.aimsalgo.texture_cleaning.clean_texture:6: ERROR: Unexpected indentation.
/casa/host/build/python/soma/aimsalgo/texture_cleaning.py:docstring of soma.aimsalgo.texture_cleaning.clean_texture:7: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... &lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::const_iterator(iterator other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator*() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const std::pair&lt; Point4d, const_LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator-&gt;() const

&lt;unknown&gt;:1: warning: documented symbol 'const const_LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator==(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator!=(const const_iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::const_LowLevelStorage(const LowLevelStorage &amp;other)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::const_LowLevelStorage::volume() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::iterator(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator*()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  std::pair&lt; Point4d, LowLevelStorage &gt; * aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator-&gt;()

&lt;unknown&gt;:1: warning: documented symbol 'LowLevelStorage &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::storage' was not declared or defined.
&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator==(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  bool aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator!=(const iterator &amp;x) const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator &amp; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::iterator::operator++()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::LowLevelStorage(carto::VolumeRef&lt; T &gt; vol, int y, int z, int t)

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::begin() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end()

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  const_iterator aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::end() const

&lt;unknown&gt;:1: warning: no uniquely matching class member found for 
  carto::VolumeRef&lt; T &gt; aims::SparseVolume&lt; carto::Volume&lt; T &gt; &gt;::LowLevelStorage::volume() const

writing output... [ 60%] auto_examples/volumeMeasures
/casa/host/build/include/anatomist/graph/AGraphIterator.h:109: warning: no matching class member found for 
  anatomist::AGraphIterator::AGraphIterator(const AGraphIterator::datatype::iterator &amp;thing)
Possible candidates:
  'anatomist::AGraphIterator::AGraphIterator(const datatype::iterator &amp;thing)'
  'anatomist::AGraphIterator::AGraphIterator(const AGraphIterator &amp;other)'

/casa/host/build/include/anatomist/graph/AGraphIterator.h:181: warning: no matching class member found for 
  anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator::datatype::const_iterator &amp;thing)
Possible candidates:
  'anatomist::const_AGraphIterator::const_AGraphIterator(const datatype::const_iterator &amp;thing)'
  'anatomist::const_AGraphIterator::const_AGraphIterator(const const_AGraphIterator &amp;other)'

writing output... [ 63%] auto_examples/volumetest
writing output... [ 65%] index
.h...
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G[ 86%] Generating AimsChannelExtract help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,691::INFO::Found '0' pipeline(s) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,691::INFO::Found '3' process(es) in 'deepsulci.sulci_labeling.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,691::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,692::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,693::INFO::Processing pipeline 'deepsulci.sulci_labeling.capsul.training.SulciDeepTraining'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,694::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/sulci_labeling/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,694::INFO::process: '3' files written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/sulci_labeling/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,694::INFO::Writing module 'sulci_labeling' index at location '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/sulci_labeling/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:22,694::INFO::Index: an index has been written for module 'sulci_labeling' at location /casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/sulci_labeling.
enerating code for file aims/resampling/linearresampler.h...
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t/momVolStgy.h...
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ding namespace list...
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Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
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Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
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Correcting members for VHDL...
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ims/transform/least_square_estimation.h...
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Generating docs for compound Adjacency...
Generating docs for compound AimsConvolution...
Generating docs for compound AimsDistmapMask...
Generating docs for compound AimsDistmapMaskPoint...
Generating docs for compound AimsEigen...
Generating docs for compound AimsEMThreshold...
Generating docs for compound AimsFIRFilter...
Generating docs for compound AimsGradient...
Generating docs for compound AimsMaskedConvolution...
Generating docs for compound AimsPCA...
Generating docs for compound AimsSVD...
Generating docs for compound AimsVFilter...
Generating docs for compound BackBalancing...
Generating docs for compound Balancing...
Generating docs for compound BlockMatching...
Generating docs for compound BucketSampler...
Generating docs for compound CC18Adjacent...
Generating docs for compound CC26Adjacent...
Generating docs for compound CC6Adjacent...
Generating docs for compound ChamferMask...
Generating docs for compound Components...
Generating docs for compound Components18Neighborhood...
Generating docs for compound Components26Neighborhood...
Generating docs for compound Connectivity18...
Generating docs for compound Connectivity26...
Generating docs for compound Connectivity6...
Generating docs for compound CovarianceStorage...
Generating docs for compound CramerSolver...
Generating docs for compound CumulatedHistogram...
Generating docs for compound DecompositionTQLI...
Generating docs for compound DetermOptimizer...
Generating docs for compound DisplacementField...
Generating docs for compound Equalizer...
Generating docs for compound ExponentialDeviates...
Generating docs for compound Facet...
Generating docs for compound Gaussian2DSmoothing...
Generating docs for compound Gaussian3DSmoothing...
Generating docs for compound GaussianColumns...
Generating docs for compound GaussianFrames...
Generating docs for compound GaussianGradient...
Generating docs for compound GaussianHessian...
Generating docs for compound GaussianJacobian...
Generating docs for compound GaussianLines...
Generating docs for compound GaussianSlices...
Generating docs for compound GaussJordan...
Generating docs for compound GCoef...
Generating docs for compound GeometricMoment...
Generating docs for compound GMLFunc...
Generating docs for compound HessenbergAccumulation...
Generating docs for compound HessenbergQR...
Generating docs for compound HessenbergReduction...
Generating docs for compound Histogram...
Generating docs for compound HouseholderTridiag...
Generating docs for compound HuffStat...
Generating docs for compound HuffStatTmpStruct...
Generating docs for compound LevenbergMarquardt...
Generating docs for compound LM2Gaussian...
Generating docs for compound LMFunction...
Generating docs for compound LMGamma...
Generating docs for compound LMGaussian...
Generating docs for compound LMSEstimator...
Generating docs for compound LZBuffer...
Generating docs for compound LZHLCompressor...
Generating docs for compound LZHLDecoderStat...
Generating docs for nested compound LZHLDecoderStat::Group...
Generating docs for compound LZHLDecompressor...
Generating docs for compound LZHLEncoder...
Generating docs for compound LZHLEncoderStat...
Generating docs for nested compound LZHLEncoderStat::Symbol...
Generating docs for compound MaxPyramidFunc...
Generating docs for compound MeanPyramidFunc...
Generating docs for compound MedFunc...
Generating docs for compound MedianPyramidFunc...
Generating docs for compound MedianSmoothing...
Generating docs for compound Mesher...
Generating docs for compound MEstimator...
Generating docs for compound MEstimatorFunc...
Generating docs for compound Minimisation...
Generatinr file anatomist/color/paletteList.h...
Generating code for file anatomist/color/qwObjPalette.h...
Generating code for file anatomist/color/wMaterial.h...
Generating code for file anatomist/color/wObjPalette.h...
Generating code for file anatomist/color/wRendering.h...
Generating code for file anatomist/commands/cActivateAction.h...
Generating code for file anatomist/commands/cAddNode.h...
Generating code for file anatomist/commands/cAddObject.h...
Generating code for file anatomist/commands/cApplyBuiltinReferential.h...
Generating code for file anatomist/commands/cAskTexExtrema.h...
Generating code for file anatomist/commands/cAssignReferential.h...
Generating code for file anatomist/commands/cCamera.h...
Generating code for file anatomist/commands/cChangePalette.h...
Generating code for file anatomist/commands/cClosePipe.h...
Generating code for file anatomist/commands/cCloseWindow.h...
Generating code for file anatomist/commands/cControlsParams.h...
Generating code for file anatomist/commands/cCreateControlWindow.h...
Generating code for file anatomist/commands/cCreateGraph.h...
Generating code for file anatomist/commands/cCreateWindow.h...
Generating code for file anatomist/commands/cDeleteAll.h...
Generating code for file anatomist/commands/cDeleteElement.h...
Generating code for file anatomist/commands/cDeleteObject.h...
Generating code for file anatomist/commands/cDuplicateObject.h...
Generating code for file anatomist/commands/cEventFilter.h...
Generating code for file anatomist/commands/cExit.h...
Generating code for file anatomist/commands/cExportTexture.h...
Generating code for file anatomist/commands/cExternalReference.h...
Generating code for file anatomist/commands/cExtractTexture.h...
Generating code for file anatomist/commands/cFusion2DParams.h...
Generating code for file anatomist/commands/cFusion3DParams.h...
Generating code for file anatomist/commands/cFusionInfo.h...
Generating code for file anatomist/commands/cFusionObjects.h...
Generating code for file anatomist/commands/cGenerateTexture.h...
Generating code for file anatomist/commands/cGetConnThres.h...
Generating code for file anatomist/commands/cGetInfo.h...
Generating code for file anatomist/commands/cGraphDisplayProperties.h...
Generating code for file anatomist/commands/cGraphParams.h...
Generating code for file anatomist/commands/cGroupObjects.h...
Generating code for file anatomist/commands/cLinkedCursor.h...
Generating code for file anatomist/commands/cLinkWindows.h...
Generating code for file anatomist/commands/cLoadGraphSubObjects.h...
Generating code for file anatomist/commands/cLoadObject.h...
Generating code for file anatomist/commands/cLoadTransformation.h...
Generating code for file anatomist/commands/cLoadTransformationGraph.h...
Generating code for file anatomist/commands/cNewId.h...
Generating code for file anatomist/commands/cNewPalette.h...
Generating code for file anatomist/commands/cObjectInfo.h...
Generating code for file anatomist/commands/cOutput.h...
Generating code for file anatomist/commands/cPaintParams.h...
Generating code for file anatomist/commands/cPopupPalette.h...
Generating code for file anatomist/commands/cReloadObject.h...
Generating code for file anatomist/commands/cRemoveObject.h...
Generating code for file anatomist/commands/cSaveObject.h...
Generating code for file anatomist/commands/cSaveTransformation.h...
Generating code for file anatomist/commands/cSaveTransformationGraph.h...
Generating code for file anatomist/commands/cSelect.h...
Generating code for file anatomist/commands/cSelectByHierarchy.h...
Generating code for file anatomist/commands/cServer.h...
Generating code for file anatomist/commands/cSetConnThres.h...
Generating code for file anatomist/commands/cSetControl.h...
Generating code for file anatomist/commands/cSetMaterial.h...
Generating code for file anatomist/commands/cSetObjectPalette.h...
Generating code for file anatomist/commands/cShowObject.h...
Generating code for file anatomist/commands/cSliceParams.h...
Generating code for file anatomist/commands/cTexturingParams.h...
Generating codProcess2 execution, a: 0.000000, b: yup
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
writing output... [ 68%] pyanatomist_base
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:95: warning: Found unknown command '\function'
/casa/host/build/include/aims/utility/dynamic.h:41: warning: Found unknown command '\function'
/casa/host/build/include/aims/mesh/meshwatershed.h:73: warning: The following parameters of aims::meshBlobsBifurcation(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; double &gt; &amp;height, std::vector&lt; int &gt; &amp;father, std::vector&lt; int &gt; &amp;label, double th) are not documented:
  parameter 'mesh'
  parameter 'field'
  parameter 'th'
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lidx' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'ldepth' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:48: warning: argument 'lmajor' of command @param is not found in the argument list of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold)
/casa/host/build/include/aims/mesh/meshwatershed.h:56: warning: The following parameters of aims::meshWatershed(const AimsSurfaceTriangle &amp;mesh, const std::vector&lt; double &gt; &amp;field, std::vector&lt; int &gt; &amp;idx, std::vector&lt; int &gt; &amp;depth, std::vector&lt; int &gt; &amp;major, std::vector&lt; int &gt; &amp;label, double threshold) are not documented:
  parameter 'mesh'
  parameter 'field'
  parameter 'idx'
  parameter 'depth'
  parameter 'major'
  parameter 'threshold'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:78: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithmInterface&lt; T &gt;::getOutputImageDimensions(const Point4dl &amp;dims) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:84: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageDimensions(const Point4dl &amp;dims) const is not documented:
  parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:89: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithmInterface&lt; T &gt;::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const
/casa/host/build/include/aims/algorithm/imagealgorithm.h:95: warning: The following parameter of aims::ImageAlgorithmInterface::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const is not documented:
  parameter 'voxelsize'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::ImageAlgorithm&lt; T &gt;::getOutputImageDimensions(const Point4dl &amp;dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:219: warning: The following parameter of aims::ImageAlgorithm::getOutputImageDimensions(const Point4dl &amp;dims) const is not documented:
  parameter 'dims'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: argument 'Point4df' of command @param is not found in the argument list of aims::ImageAlgorithm&lt; T &gt;::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/algorithm/imagealgorithm.h:223: warning: The following parameter of aims::ImageAlgorithm::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const is not documented:
  parameter 'voxelsize'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:319: warning: The following parameter of aims::ImageAlgorithmSwitch&lt; T, false &gt;::execute(ImageAlgorithmInterface&lt; T &gt; &amp;algo, const carto::VolumeRef&lt; T &gt; &amp;in, carto::VolumeRef&lt; T &gt; &amp;out, int verbose=carto::verbose) is not documented:
  parameter 'verbose'
/casa/host/build/include/aims/algorithm/imagealgorithm.h:350: warning: The following parameter of aims::ImageAlgorithmSwitch&lt; T, true &gt;::execute(ImageAlgorithmInterface&lt; ChannelType &gt; &amp;algo, const carto::VolumeRef&lt; T &gt; &amp;in, carto::VolumeRef&lt; T &gt; &amp;out, int verbose) is not documented:
  parameter 'verbose'
e for file anatomist/commands/cWindowBlock.h...
Generating code for file anatomist/commands/cWindowConfig.h...
Generating code for file anatomist/config/anatomist_config.h...
Generating code for file anatomist/constrainteditor/wConstraintEditor.h...
Generating code for file anatomist/control/abstractMenuHandler.h...
Generating code for file anatomist/control/backPixmap_P.h...
Generating code for file anatomist/control/coloredpixmap.h...
Generating code for file anatomist/control/controlConfig.h...
Generating code for file anatomist/control/controlMenuHandler.h...
Generating code for file anatomist/control/dynsegmentcontrol.h...
Generating code for file anatomist/control/graphParams.h...
Generating code for file anatomist/control/labelnamingcontrol.h...
Generating code for file anatomist/control/levelsetcontrol.h...
Generating code for file anatomist/control/listboxeditor.h...
Generating code for file anatomist/control/nodeselectioncontrol.h...
Generating code for file anatomist/control/objectDrag.h...
Generating code for file anatomist/control/paintcontrol.h...
Generating code for file anatomist/control/qAbout.h...
Generating code for file anatomist/control/qImageLabel.h...
Generating code for file anatomist/control/qObjTree.h...
Generating code for file anatomist/control/qWinTree.h...
Generating code for file anatomist/control/roimanagementcontrol.h...
Generating code for file anatomist/control/surfpaintcontrol.h...
Generating code for file anatomist/control/toolTips-qt.h...
Generating code for file anatomist/control/wControl.h...
Generating code for file anatomist/control/whatsNew.h...
Generating code for file anatomist/control/winconfigio.h...
Generating code for file anatomist/control/windowdrag.h...
Generating code for file anatomist/control/wPreferences.h...
Generating code for file anatomist/controler/action.h...
Generating code for file anatomist/controler/actiondictionary.h...
Generating code for file anatomist/controler/actionpool.h...
Generating code for file anatomist/controler/control.h...
Generating code for file anatomist/controler/control_d.h...
Generating code for file anatomist/controler/controldictionary.h...
Generating code for file anatomist/controler/controlgroupdictionary.h...
Generating code for file anatomist/controler/controlmanager.h...
Generating code for file anatomist/controler/controlswitch.h...
Generating code for file anatomist/controler/icondictionary.h...
Generating code for file anatomist/controler/view.h...
Generating code for file anatomist/dialogs/colorDialog.h...
Generating code for file anatomist/dialogs/colorWidget.h...
Generating code for file anatomist/dialogs/qScopeLineEdit.h...
Generating code for file anatomist/erpio/erpR.h...
Generating code for file anatomist/erpio/erpWraper.h...
Generating code for file anatomist/fusion/defFusionMethods.h...
Generating code for file anatomist/fusion/fusionChooser.h...
Generating code for file anatomist/fusion/fusionFactory.h...
Generating code for file anatomist/gradientwidget/gradient.h...
Generating code for file anatomist/gradientwidget/gradwidget.h...
Generating code for file anatomist/gradientwidget/spline.h...
Generating code for file anatomist/graph/AGraphIterator.h...
Generating code for file anatomist/graph/attribAObject.h...
Generating code for file anatomist/graph/Graph.h...
Generating code for file anatomist/graph/GraphObject.h...
Generating code for file anatomist/graph/pythonAObject.h...
Generating code for file anatomist/graph/qgraphproperties.h...
Generating code for file anatomist/hierarchy/hierarchy.h...
Generating code for file anatomist/interface/qwSurfMatch.h...
Generating code for file anatomist/interpoler/interpoler.h...
Generating code for file anatomist/interpoler/interpolMethod.h...
Generating code for file anatomist/landmark/graphLandmark.h...
Generating code for file anatomist/landmark/landmFactory.h...
Generating code for file anatomist/landmark/landmPicker.h...
Generating code for file anatomist/landmark/plane.h...
Generating code for file anatomist/misc/error.h...
Generating code for file anatomist/mobject/F[ 86%] Generating AimsComposeTransformation help file ...
g docs for compound Moment...
Generating docs for compound MomentBase...
Generating docs for compound MomentFactory...
Generating docs for compound MomentIncrementalStrategy...
Generating docs for compound MomentInvariant...
Generating docs for compound MomentNormalStrategy...
Generating docs for compound MomentStrategy...
Generating docs for compound MomentSurfacicStrategy...
Generating docs for compound MomentTriangleFactory...
Generating docs for compound MomentTriangleStrategy...
Generating docs for compound MomentVolumicStrategy...
Generating docs for compound MpiDataTypeCode...
Generating docs for compound MSFunc...
Generating docs for compound NormalDeviates...
Generating docs for compound ObjectiveFunc...
Generating docs for compound Optimizer...
Generating docs for compound OptimizerProbe...
Generating docs for compound PowellOptimizer...
Generating docs for compound PVItem...
Generating docs for compound PVVectorItem...
Generating docs for compound Pyramid...
Generating docs for compound PyramidFunc...
Generating docs for compound RecursiveGaussian...
Generating docs for compound Sampler...
Generating docs for compound ScaleControl...
Generating docs for compound SimpleHistogram...
Generating docs for compound SingleOptimizer...
Generating docs for compound SobelGradient...
Generating docs for compound SobelGradient&lt; T, 2 &gt;...
Generating docs for compound SoftDecisionSimilarComponent...
Generating docs for compound TabulSpline...
Generating docs for compound TalairachACPCNorm...
Generating docs for compound TalairachBoundingBoxPoints...
Generating docs for compound TalairachBox...
Generating docs for compound TalairachBoxBase...
Generating docs for compound TalairachPoints...
Generating docs for compound TalairachReferential...
Generating docs for compound TalairachVolume...
Generating docs for compound TopologicalClassification...
Generating docs for compound TopologicalClassificationBase...
Generating docs for compound TopologicalClassificationMeaning...
Generating docs for compound TopologicalClassifier...
Generating docs for compound TopologicalClassifier&lt; aims::BucketMap&lt; T &gt; &gt;...
Generating docs for compound TopologicalClassifier&lt; carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound TopologicalRelation...
Generating docs for compound Topology...
Generating docs for compound TopologyBase...
Generating docs for compound Transformation...
Generating docs for compound TriangulationMoment...
Generating docs for compound UniformDeviates...
Generating docs for compound WLMSEstimator...
Generating namespace index...
Generating docs for namespace aims
Generating docs for compound aims::ImageAlgorithmInterface...
Generating docs for compound aims::ImageAlgorithm...
Generating docs for compound aims::ImageAlgorithmSwitch...
Generating docs for compound aims::ImageAlgorithmSwitch&lt; T, false &gt;...
Generating docs for compound aims::ImageAlgorithmSwitch&lt; T, true &gt;...
Generating docs for compound aims::Individuals...
Generating docs for compound aims::ClassifStrategy...
Generating docs for compound aims::Distance...
Generating docs for compound aims::DynamicStrategy...
Generating docs for compound aims::IterativeClassification...
Generating docs for compound aims::KmeansStrategy...
Generating docs for compound aims::PpcaAnalyserElement...
Generating docs for compound aims::MixtureOfPPCA...
Generating docs for compound aims::PcaStrategy...
Generating docs for compound aims::GradientAdvection...
Generating docs for compound aims::FastMarching...
Generating docs for compound aims::Point3dfCompare...
Generating docs for compound aims::Point3dCompare...
Generating docs for compound aims::PairCompare...
Generating docs for compound aims::SetCompare...
Generating docs for compound aims::RealToRealFunctionTabulation...
Generating docs for compound aims::FoldGraphAttributes...
Generating docs for compound aims::FoldArgOverSegment...
Generating docs for compound aims::GeodesicPath...
Generating docs for compound aims::RegularBinnedHistogram...
Generating docs for compound aims::InterpolatedVolume...
Generating docs for compound usion2D.h...
Generating code for file anatomist/mobject/Fusion3D.h...
Generating code for file anatomist/mobject/glmobject.h...
Generating code for file anatomist/mobject/globjectlist.h...
Generating code for file anatomist/mobject/globjectvector.h...
Generating code for file anatomist/mobject/MObject.h...
Generating code for file anatomist/mobject/ObjectList.h...
Generating code for file anatomist/mobject/objectVector.h...
Generating code for file anatomist/mobject/wFusion2D.h...
Generating code for file anatomist/mobject/wFusion3D.h...
Generating code for file anatomist/module/anasurfmatch.h...
Generating code for file anatomist/module/histogram.h...
Generating code for file anatomist/module/profile.h...
Generating code for file anatomist/module/surfpaintmodule.h...
Generating code for file anatomist/module/surfpainttools.h...
Generating code for file anatomist/module/volrenderfusionmethod.h...
Generating code for file anatomist/module/volrendermodule.h...
Generating code for file anatomist/object/actions.h...
Generating code for file anatomist/object/clippedobject.h...
Generating code for file anatomist/object/loadevent.h...
Generating code for file anatomist/object/mobjectio.h...
Generating code for file anatomist/object/Object.h...
Generating code for file anatomist/object/objectConverter.h...
Generating code for file anatomist/object/objectmenu.h...
Generating code for file anatomist/object/objectmenuCallbacks.h...
Generating code for file anatomist/object/objectparamselect.h...
Generating code for file anatomist/object/objectutils.h...
Generating code for file anatomist/object/objectutils_d.h...
Generating code for file anatomist/object/optionMatcher.h...
Generating code for file anatomist/object/oReader.h...
Generating code for file anatomist/object/qtextureparams.h...
Generating code for file anatomist/object/selfsliceable.h...
Generating code for file anatomist/object/sliceable.h...
Generating code for file anatomist/object/texturepanel.h...
Generating code for file anatomist/object/texturewin.h...
Generating code for file anatomist/object/volrender.h...
Generating code for file anatomist/object/volrenderpanel.h...
Generating code for file anatomist/object/volrendershader.h...
Generating code for file anatomist/observer/Observable.h...
Generating code for file anatomist/observer/observcreat.h...
Generating code for file anatomist/observer/Observer.h...
Generating code for file anatomist/primitive/primitive.h...
Generating code for file anatomist/processor/Command.h...
Generating code for file anatomist/processor/context.h...
Generating code for file anatomist/processor/errormessage.h...
Generating code for file anatomist/processor/event.h...
Generating code for file anatomist/processor/event_doc.h...
Generating code for file anatomist/processor/pipeReader.h...
Generating code for file anatomist/processor/pipeReaderP.h...
Generating code for file anatomist/processor/Processor.h...
Generating code for file anatomist/processor/Reader.h...
Generating code for file anatomist/processor/Registry.h...
Generating code for file anatomist/processor/Serializer.h...
Generating code for file anatomist/processor/server.h...
Generating code for file anatomist/processor/unserializer.h...
Generating code for file anatomist/processor/Writer.h...
Generating code for file anatomist/qtvr3/creator.h...
Generating code for file anatomist/qtvr3/cubeZbuffer.h...
Generating code for file anatomist/qtvr3/mipShader.h...
Generating code for file anatomist/qtvr3/mpvrShader.h...
Generating code for file anatomist/qtvr3/rfmtShader.h...
Generating code for file anatomist/qtvr3/shader.h...
Generating code for file anatomist/qtvr3/shaderFactory.h...
Generating code for file anatomist/qtvr3/slicing.h...
Generating code for file anatomist/qtvr3/sumShader.h...
Generating code for file anatomist/qtvr3/vector3d.h...
Generating code for file anatomist/qtvr3/vrShader.h...
Generating code for file anatomist/qtvr3/vrsingleton.h...
Generating code for file anatomist/reference/Geometry.h...
Generating code for file anatomist/reference/Referential.h...
Gener/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
reading sources... [ 66%] python_bv_processing
aims::RoiSelectorReader...
Generating docs for compound aims::RoiGtmReader...
Generating docs for compound aims::RoiGtmWriter...
Generating docs for compound aims::DiscriminantAnalysisElement...
Generating docs for compound aims::DiscriminantAnalysis...
Generating docs for compound aims::BaseHarrisDetector...
Generating docs for compound aims::HarrisDetector...
Generating docs for compound aims::HarrisDetector&lt; T, 2 &gt;...
Generating docs for compound aims::ProbabilisticPcaElement...
Generating docs for compound aims::ProbabilisticPca...
Generating docs for compound aims::BSplineOrder...
Generating docs for compound aims::BSplineOrder&lt; 0 &gt;...
Generating docs for compound aims::BSpline...
Generating docs for compound aims::FastBSpline...
Generating docs for compound aims::TabulBSpline...
Generating docs for compound aims::DiscreteBSpline...
Generating docs for compound aims::GeometricProperties...
Generating docs for compound aims::Curvature...
Generating docs for compound aims::CurvatureFactory...
Generating docs for compound aims::FiniteElementCurvature...
Generating docs for compound aims::BoixCurvature...
Generating docs for compound aims::BarycenterCurvature...
Generating docs for compound aims::BoixGaussianCurvature...
Generating docs for compound aims::GaussianCurvature...
Generating docs for compound aims::VertexRemover...
Generating docs for compound aims::MeshInterpoler...
Generating docs for nested compound aims::MeshInterpoler::Private...
Generating docs for compound aims::CoordinatesFieldMeshInterpoler...
Generating docs for compound aims::MorphoGreyLevel...
Generating docs for compound aims::PointsDistribution...
Generating docs for nested compound aims::PointsDistribution::CoulombAndRestoringForce...
Generating docs for nested compound aims::PointsDistribution::CoulombForce...
Generating docs for nested compound aims::PointsDistribution::ForceFunction...
Generating docs for nested compound aims::PointsDistribution::MoveConstraints...
Generating docs for nested compound aims::PointsDistribution::SphereMove...
Generating docs for compound aims::DericheSmoother...
Generating docs for compound aims::PeronaMalikSmoother...
Generating docs for compound aims::FiniteElementSmoother...
Generating docs for compound aims::ltstr_p3d...
Generating docs for compound aims::ltstr_p3d&lt; Point3d &gt;...
Generating docs for compound aims::ltstr_p3d&lt; std::pair&lt; Point3df, uint &gt; &gt;...
Generating docs for compound aims::MaximumPoint...
Generating docs for compound aims::SaddlePoint...
Generating docs for compound aims::GreyLevelBlob...
Generating docs for compound aims::BlobMeasurements...
Generating docs for compound aims::ExtractGreyLevelBlobs...
Generating docs for compound aims::GreyLevelBlobTools...
Generating docs for compound aims::BaseScaleSpace...
Generating docs for compound aims::ScaleSpace...
Generating docs for nested compound aims::ScaleSpace::BlobDescriptor...
Generating docs for compound aims::ScaleSpace&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::ScaleSpace&lt; AimsSurface&lt; D, Void &gt;, Texture&lt; T &gt; &gt;...
Generating docs for compound aims::ScaleLevel...
Generating docs for compound aims::ScaleLevel&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::ScaleLevel&lt; AimsSurface&lt; D, Void &gt;, Texture&lt; T &gt; &gt;...
Generating docs for compound aims::Smoother...
Generating docs for compound aims::Smoother&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::Smoother&lt; AimsSurface&lt; D, Void &gt;, Texture&lt; T &gt; &gt;...
Generating docs for compound aims::PrimalSketch...
Generating docs for compound aims::ScaleSpaceBlob...
Generating docs for compound aims::Bifurcation...
Generating docs for compound aims::ltstr_blob...
Generating docs for compound aims::Primalsketch2graph...
Generating docs for compound aims::CoupledSmoother...
Generating docs for compound aims::CoupledSmoother&lt; carto::VolumeRef&lt; T &gt;, carto::VolumeRef&lt; T &gt; &gt;...
Generating docs for compound aims::CoupledDiffusion2DSmoother...
Generating docs for compound aims::ConvolutionSubSam/casa/host/build/include/aims/resampling/resampler.h:228: warning: argument 'transform' of command @param is not found in the argument list of aims::Resampler&lt; T &gt;::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, carto::Volume&lt; T &gt; &amp;output_data, bool verbose=false) const
/casa/host/build/include/aims/resampling/resampler.h:247: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, carto::Volume&lt; T &gt; &amp;output_data, bool verbose=false) const is not documented:
  parameter 'inverse_transform_to_mm'
/casa/host/build/include/aims/resampling/resampler.h:205: warning: argument 'inverse_transform' of command @param is not found in the argument list of aims::Resampler&lt; T &gt;::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, const Point3df &amp;output_location, T &amp;output_value, int timestep) const
/casa/host/build/include/aims/resampling/resampler.h:221: warning: The following parameter of aims::Resampler::resample_inv(const carto::Volume&lt; T &gt; &amp;input_data, const soma::Transformation3d &amp;inverse_transform_to_mm, const T &amp;background, const Point3df &amp;output_location, T &amp;output_value, int timestep) const is not documented:
  parameter 'inverse_transform_to_mm'
ating code for file anatomist/reference/refobserver.h...
Generating code for file anatomist/reference/refpixmap.h...
Generating code for file anatomist/reference/Transformation.h...
Generating code for file anatomist/reference/transformobserver.h...
Generating code for file anatomist/reference/transfSet.h...
Generating code for file anatomist/reference/wChooseReferential.h...
Generating code for file anatomist/reference/wReferential.h...
Generating code for file anatomist/reference/wReferential_3d.h...
Generating code for file anatomist/selection/postSelector.h...
Generating code for file anatomist/selection/qSelectFactory.h...
Generating code for file anatomist/selection/qSelectWid.h...
Generating code for file anatomist/selection/qSelMenu.h...
Generating code for file anatomist/selection/qwSelAttrib.h...
Generating code for file anatomist/selection/selectFactory.h...
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Generating code for file anatomist/sparsematrix/connectivitymatrix.h...
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Generating code for file anatomist/stdmod/stdmod.h...
Generating code for file anatomist/surface/cutmesh.h...
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Generating code for file anatomist/surface/fusiontexsurf.h...
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Generating code for file anatomist/surface/glcomponent_internals.h...
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Generating code for file anatomist/surface/shownormals.h...
Generating code for file anatomist/surface/shownormalsgui.h...
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Generating code for file anatomist/surface/tesselatedmesh.h...
Generating code for file anatomist/surface/texsurface.h...
Generating code for file anatomist/surface/textobject.h...
Generating code for file anatomist/surface/texture.h...
Generating code for file anatomist/surface/transformedobject.h...
Generating code for file anatomist/surface/triangulated.h...
Generating code for file anatomist/surface/vectorfield.h...
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Generating code for file anatomist/surfmatcher/surfMatcher.h...
Generating code for file anatomist/surfmatcher/surfMatchMethod.h...
Generating code for file anatomist/volume/slice.h...
Generating code for file anatomist/volume/Volume.h...
Generating code for file anatomist/volume/volumeview.h...
Generating code for file anatomist/window/colorstyle.h...
Generating code for file anatomist/window/controlledWindow.h...
Generating code for file anatomist/window/glcaps.h...
Generating code for file anatomist/window/glcontext.h...
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Generating code for file anatomist/window/glwidgetmanager.h...
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Generating code for file anatomist/window3D/agraphicsview_p.h...
Generating code for file anatomist/window3D/annotedgraph.h...
Generating code for file anatomist/window3D/boxviewslice.h...
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Generating code for file anatomist/window3D/glwidget3D.h...
Generating code for file anatomist/window3D/labeleditaction.h...
Generating code for file anatomist/window3D/orientationAnnotation.h...
Generating code for file anatomist/window3D/trackball.h...
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Generating code for file anatomist/window3D/wFixedPointOfView.h...
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Generating code for file anatomist/window3D/zoomDialog.h...
Generating code for file anatomist/winhisto/histo.h...
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Generating code for file anatomist/winprof/profFactory.h...
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Generating file documentation...
Generating docs for file anatomist/action/blobsegmentation.h...
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Generating docs for file anatomist/browser/attDescr.h...
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Generating docs for file anatomist/browser/browsercontrol.h...
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Generating docs for file anatomist/bucket/Bucket.h...
Generating docs for file anatomist/color/colortraits.h...
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Generating docs for file anatomist/color/palette.h...
Generating docs for file anatomist/color/paletteList.h...
Generating docs for file anatomist/color/qwObjPalette.h...
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Generating docs for file anatomist/commands/cActivateAction.h...
Generating docs for file anatomist/commands/cAddNode.h...
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Generating docs for file anatomist/commands/cApplyBuiltinReferential.h...
Generating docs for file anatomist/commands/cAskTexExtrema.h...
Generat/casa/host/build/include/aims/scalespace/meshDiffuse.h:69: warning: The following parameters of aims::TextureSmoothing::surfaceBlockSmooth(const std::string &amp;latt_filename, const std::string *val_filename, const std::string &amp;path_name, unsigned nscans, float dt, unsigned iter, unsigned scans_block, unsigned nodes_block, unsigned nnodes, unsigned ncolPINV, const std::string *outfiles, const float HMAX, const float Umax) are not documented:
  parameter 'HMAX'
  parameter 'Umax'
ing docs for file anatomist/commands/cAssignReferential.h...
Generating docs for file anatomist/commands/cCamera.h...
Generating docs for file anatomist/commands/cChangePalette.h...
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Generating docs for file anatomist/commands/cDeleteAll.h...
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Generating docs for file anatomist/commands/cFusion3DParams.h...
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Generating docs for file ana/casa/host/build/include/aims/signalfilter/filteringfunction_element.h:74: warning: The following parameter of aims::ElementFilteringFunction::execute(const carto::VolumeRef&lt; T &gt; &amp;in, const carto::rc_ptr&lt; StructuringElement &gt; &amp;se) const=0 is not documented:
  parameter 'se'
pler...
Generating docs for compound aims::DirectBSplineSubSampler...
Generating docs for compound aims::MovingAverageSubSampler...
Generating docs for compound aims::MovingAverageCascadeSubSampler...
Generating docs for compound aims::SplinePyramid...
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Generating docs for compound aims::TrilinearFfd...
Generating docs for compound aims::Writer&lt; aims::FfdTransformation &gt;...
Generating docs for compound aims::CubicResampler...
Generating docs for compound aims::HarmonicCageMeshResampler...
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Generating docs for compound aims::MajorityLabelResampler...
Generating docs for compound aims::MeshToVoxelsResampler...
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Generating docs for nested compound aims::BucketBlobExtractor::BlobsMerger...
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Generating docs for compound aims::MaskedDiffusionSmoother&lt; T, std::vector&lt; Point3df &gt; &gt;...
Generating docs for compound aims::MaskedDiffusionSmoother&lt; T, carto::VolumeRef&lt; short &gt; &gt;...
Generating docs for compound aims::FilteringFunctionInterface...
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Generating docs for file anatomist/control/graphParams.h...
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Generating docs for file anatomist/module/anasurfmatch[ 86%] Generating AimsConnectComp help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:23,553::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
warning: Included by graph for 'Command.h' not generated, too many nodes (63), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
writing output... [ 70%] pyanatomist_cpp
.h...
Generating docs for file anatomist/module/histogram.h...
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Generating docs for file anatomist/object/texturepanel.h...
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Generating docs for file anatomist/object/volrender.h...
Generating docs for file anatomist/object/volrenderpanel.h...
Generating docs for file anatomist/object/volrendershader.h...
Generating docs for file anatomist/observer/Observable.h...
Generating docs for file anatomist/observer/observcreat.h...
Generating docs for file anatomist/observer/Observer.h...
Generating docs for file anatomist/primitive/primitive.h...
Generating docs for file anatomist/processor/Command.h...
Generating docs for file anatomist/processor/context.h...
Generating docs for file anatomist/processor/errormessage.h...
Generating docs for file anatomist/processor/event.h...
Generating docs for file anatomist/processor/event_doc.h...
Generating docs for file anatomist/processor/pipeReader.h...
Generating docs for file anatomist/processor/pipeReaderP.h...
Generating docs for file anatomist/processor/Processor.h...
Generating docs for file anatomist/processor/Reader.h...
Generating docs for file anatomist/processor/Registry.h...
Generating docs for file anatomist/processor/Serializer.h...
Generating docs for file anatomist/processor/server.h...
Generating docs for file anatomist/processor/unserializer.h...
Generating docs for file anatomist/processor/Writer.h...
Generating docs for file anatomist/qtvr3/creator.h...
Generating docs for file anatomist/qtvr3/cubeZbuffer.h...
Generating docs for file anatomist/qtvr3/mipShader.h...
Generating docs for file anatomist/qtvr3/mpvrShader.h...
Generating docs for file anatomist/qtvr3/rfmtShader.h...
Generating docs for file anatomist/qtvr3/shader.h...
Generating docs for file anatomist/qtvr3/shaderFactory.h...
Generating docs for file anatomist/qtvr3/slicing.h...
Generating docs for file anatomist/qtvr3/sumShader.h...
Generating docs for file anatomist/qtvr3/vector3d.h...
Generating docs for file anatomist/qtvr3/vrShader.h...
Generating docs for file anatomist/qtvr3/vrsingleton.h...
Generating docs for file anatomist/reference/Geometry.h...
Generating docs for file anatomist/reference/Referential.h...
Generating docs for file anatomist/reference/refobserver.h...
Generating docs for file anatomist/reference/refpixmap.h...
Generating docs for file anatomist/reference/Transformation.h...
Generating docs for file anatomist/reference/transformobserver.h...
Generating docs for file anatomist/reference/transfSet.h...
Generating docs for file anatomist/reference/wChooseReferential.h...
Generating docs for file anatomist/reference/wReferential.h...
Generating docs for file anatomist/reference/wReferential_3d.h...
Generating docs for file anatomist/selection/postSelector.h...
Generating docs for file anatomist/selection/qSelectFactory.h...
Generating docs for file anatomist/selection/qSelectWid.h...
Generating docs for file anatomist/selection/qSelMenu.h...
Generating docs for file anatomist/selection/qwSelAttrib.h...
Generating docs for file anatomist/selection/selectFactory.h...
Generating docs for file anatomist/selection/selector.h...
Generating docs for file anatomist/selection/wSelChooser.h...
Generating docs for file anatomist/sparsematrix/connectivitymatrix.h...
Generating docs for file anatomist/sparsematrix/sparsematrix.h...
Generating docs for file anatomist/stdmod/stdmod.h...
Generating docs for file anatomist/surface/cutmesh.h...
Generating docs for file anatomist/surface/fusion2Dmesh.h...
Generating docs for file anatomist/surface/fusiontexsurf.h...
Generating docs for file anatomist/surface/glcomponent.h...
Generating docs for file anatomist/surface/glcomponent_internals.h...
Generating docs for file anatomist/surface/globject.h...
Generating docs for file anatomist/surface/mtexture.h...
Generating docs for file anatomist/surface/planarfusion3d.h...
Generating docs for file anatomist/surface/Shader.h...
Generating docs for file anatomist/surface/shownormals.h...
Generating docs for file anatomist/surface/shownormalsgui.h...
Generating docs for file anatomist/surface/surface.h...
Generating docs for file anatomist/surface/surface_d.h...
Generating docs for file anatomist/surface/tesselatedmesh.h...
Generating docs for file anatomist/surface/texsurface.h...
Generating docs for file anatomist/surface/textobject.h...
Generating docs for file anatomist/surface/texture.h...
Generating docs for file anatomist/surface/transformedobject.h...
Generating docs for file anatomist/surface/triangulated.h...
Generating docs for file anatomist/surface/vectorfield.h...
Generating docs for file anatomist/surface/wvectorfield.h...
Generating docs for file anatomist/surfmatcher/surfMatcher.h...
Generating docs for file anatomist/surfmatcher/surfMatchMethod.h...
Generating docs for file anatomist/volume/slice.h...
Generating docs for file anatomist/volume/Volume.h...
Generating docs for file anatomist/volume/volumeview.h...
Generating docs for file anatomist/window/colorstyle.h...
Generating docs for file anatomist/window/controlledWindow.h...
Generating docs for file anatomist/window/glcaps.h...
Generating docs for file anatomist/window/glcontext.h...
Generating docs for file anatomist/window/glwidget.h...
Generating docs for file anatomist/window/glwidgetmanager.h...
Generating docs for file anatomist/window/qwinblock.h...
Generating docs for file anatomist/window/qwindow.h...
Generating docs for file anatomist/window/qWinFactory.h...
Generating docs for file anatomist/window/viewstate.h...
Generating docs for file anatomist/window/Window.h...
Generating docs for file anatomist/window/winFactory.h...
Generating docs for file anatomist/window3D/agraphicsview_p.h...
Generating docs for file anatomist/window3D/annotedgraph.h...
Generating docs for file anatomist/window3D/boxviewslice.h...
Generating docs for file anatomist/window3D/connmatrixcontrol.h...
Generating docs for file anatomist/window3D/control3D.h...
Generating docs for file anatomist/window3D/cursor.h...
Generating docs for file anatomist/window3D/glwidget3D.h...
Generating docs for file anatomist/window3D/labeleditaction.h...
Generating docs for file anatomist/window3D/orientationAnnotation.h...
Generating docs for file anatomist/window3D/trackball.h...
Generating docs for file anatomist/window3D/trackcut.h...
Generating docs for file anatomist/window3D/trackOblique.h...
Generating docs for file anatomist/window3D/trackObliqueSlice.h...
Generating docs for file anatomist/window3D/transformer.h...
Generating docs for file anatomist/window3D/wFixedPointOfView.h...
Generating docs for file anatomist/window3D/window3D.h...
Generating docs for file anatomist/window3D/window3D_private.h...
Generating docs for file anatomist/window3D/wLightModel.h...
Generating docs for file anatomist/window3D/wTools3D.h...
Generating docs for file anatomist/window3D/zoomDialog.h...
Gen/casa/host/build/include/anatomist/landmark/landmPicker.h:80: warning: The following parameter of ALandmarkPicker::nearestEuclidian(anatomist::GLComponent *obj, const Point3df &amp;pt, unsigned &amp;index, Point3df &amp;vpos) is not documented:
  parameter 'vpos'
/casa/host/build/include/anatomist/landmark/landmPicker.h:65: warning: The following parameter of ALandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/aims/distancemap/meshdistance.h:86: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface&lt; 3, Void &gt; &amp;mesh, MapType &amp;distmaps, const Texture&lt; T &gt; &amp;inittex, float max_dist=FLT_MAX) is not documented:
  parameter 'mesh'
/casa/host/build/include/aims/distancemap/meshdistance.h:99: warning: The following parameter of aims::meshdistance::pairwiseDistanceMaps(const AimsSurface&lt; 3, Void &gt; &amp;mesh, MapType &amp;distmaps, float max_dist=FLT_MAX) is not documented:
  parameter 'mesh'
/casa/host/build/include/aims/mesh/mesh_graph.h:122: warning: The following parameters of aims::meshgraph::List2GraphMeshConvertor::operator()(TVertexCollection const &amp;vertices, TFaceCollection const &amp;faceIndices, std::vector&lt; std::list&lt; std::size_t &gt; &gt; const &amp;invertedFaceIndices, TNeighborCollection const &amp;neighbors, std::list&lt; TVertexNode &gt; &amp;graph_vertices, std::list&lt; TFaceNode &gt; &amp;graph_faces) are not documented:
  parameter 'graph_vertices'
  parameter 'graph_faces'
ims::LinearFilteringFunctionFactory...
Generating docs for compound aims::FilteringImageAlgorithmInterface...
Generating docs for compound aims::LinearFilteringImageAlgorithm...
Generating docs for compound aims::ElementFilteringImageAlgorithm...
Generating docs for compound aims::GaborFilter...
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Generating docs for compound aims::CausalSinglePoleIIRFilter...
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Generating docs for compound aims::BundleTransformer...
Generating docs for namespace aims::convolutionfilter
Generating docs for namespace aims::convolutionsubsampler
Generating docs for namespace aims::internal
Generating docs for namespace aims::internal::fastmarching
Generating docs for compound aims::internal::fastmarching::StorageTrait...
Generating docs for compound aims::internal::fastmarching::StorageTrait&lt; carto::Volume&lt; T &gt; &gt;...
Generating docs for compound aims::internal::fastmarching::StorageTrait&lt; BucketMap&lt; T &gt; &gt;...
Generating docs for namespace aims::knn
Generating docs for compound aims::knn::Distance...
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Generating docs for compound aims::knn::SquaredEuclidianDistance...
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Generating docs for compound aims::knn::Database...
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Generating docs for compound aims::knn::KnnBruteForce...
Generating docs for compound aims::knn::KnnFriedman...
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Generating docs for namespace aims::meshdistance
Generating docs for compound aims::meshdistance::DistMapMatrixTraits...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits&lt; std::vector&lt; T &gt; &gt;...
Generating docs for compound aims::meshdistance::DistMapMatrixTraits&lt; std::map&lt; T, U &gt; &gt;...
Generating docs for namespace aims::meshgraph
Generating docs for compound aims::meshgraph::MeshFaceNode...
Generating docs for compound aims::meshgraph::MeshVertexNode...
Generating docs for compound aims::meshgraph::List2GraphMeshConvertor...
Generating doc/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: argument 'Point4dl' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm&lt; T &gt;::getOutputImageDimensions(const Point4dl &amp;dims) const inherited from member getOutputImageDimensions at line 78 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:137: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageDimensions(const Point4dl &amp;dims) const is not documented:
  parameter 'dims'
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: argument 'Point4df' of command @param is not found in the argument list of aims::singlechannel::SubSamplingImageAlgorithm&lt; T &gt;::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const inherited from member getOutputImageVoxelSize at line 89 in file /casa/host/build/include/aims/algorithm/imagealgorithm.h
/casa/host/build/include/aims/resampling/subsamplingimagealgorithm.h:144: warning: The following parameter of aims::singlechannel::SubSamplingImageAlgorithm::getOutputImageVoxelSize(const Point4df &amp;voxelsize) const is not documented:
  parameter 'voxelsize'
/casa/host/build/include/anatomist/reference/wChooseReferential.h:71: warning: The following parameter of ChooseReferentialWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:23,669::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
/casa/host/build/include/aims/resampling/bucketmapsampler.h:67: warning: argument 'object' of command @param is not found in the argument list of aimsalgo::BucketMapSampler&lt; T, D &gt;::sample(Samplable&lt; T, D &gt; *data, unsigned dimensionIndex, AimsVector&lt; short, D &gt; &amp;partialCoords, aims::BucketMap&lt; Void &gt; &amp;result)
/casa/host/build/include/aims/resampling/bucketmapsampler.h:73: warning: The following parameter of aimsalgo::BucketMapSampler::sample(Samplable&lt; T, D &gt; *data, unsigned dimensionIndex, AimsVector&lt; short, D &gt; &amp;partialCoords, aims::BucketMap&lt; Void &gt; &amp;result) is not documented:
  parameter 'data'
/casa/host/build/include/anatomist/erpio/erpWraper.h:71: warning: The following parameter of ErpWraper::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/window3D/wFixedPointOfView.h:57: warning: The following parameter of FixedPointOfViewWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/mobject/wFusion2D.h:56: warning: The following parameter of Fusion2DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/mobject/wFusion3D.h:57: warning: The following parameter of Fusion3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/landmark/graphLandmark.h:74: warning: The following parameter of GraphLandmarkPicker::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/window3D/wLightModel.h:57: warning: The following parameter of LightModelWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/color/wMaterial.h:64: warning: The following parameter of MaterialWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/paintaction.h:78: warning: The following parameter of PaintActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:23,708::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/build/include/anatomist/color/qwObjPalette.h:62: warning: The following parameter of QAPaletteWin::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:23,752::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/graph/qgraphproperties.h:59: warning: The following parameter of QGraphProperties::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
done
checking consistency... /casa/host/src/aims/aims-free/5.1/pyaims/doc/sphinx/pyaims_aimsalgo_examples.rst: WARNING: document isn't included in any toctree
done
preparing documents... /casa/host/build/include/anatomist/browser/qwObjectBrowser.h:85: warning: The following parameter of QObjectBrowser::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
done
writing output... [  7%] index
s for compound aims::meshgraph::Graph2ListMeshConvertor...
Generating docs for namespace aims::singlechannel
Generating docs for compound aims::singlechannel::SubSamplingImageAlgorithm...
Generating docs for compound aims::singlechannel::LinearFilteringImageAlgorithm...
Generating docs for compound aims::singlechannel::ElementFilteringImageAlgorithm...
Generating docs for namespace aims::strel
Generating docs for namespace aims::util
Generating docs for namespace aimsalgo
Generating docs for compound aimsalgo::BucketMapSampler...
Generating docs for compound aimsalgo::GeneralSampler...
Generating docs for compound aimsalgo::Samplable...
Generating docs for compound aimsalgo::Polynomial...
Generating docs for namespace carto
Generating docs for namespace geodesic
Generating docs for compound geodesic::GeodesicAlgorithmBase...
Generating docs for compound geodesic::SubdivisionNode...
Generating docs for compound geodesic::GeodesicAlgorithmSubdivision...
Generating docs for compound geodesic::DijkstraNode1...
Generating docs for compound geodesic::GeodesicAlgorithmDijkstraAlternative...
Generating docs for compound geodesic::DijkstraNode...
Generating docs for compound geodesic::GeodesicAlgorithmDijkstra...
Generating docs for compound geodesic::SimlpeMemoryAllocator...
Generating docs for compound geodesic::MemoryAllocator...
Generating docs for compound geodesic::OutputBuffer...
Generating docs for compound geodesic::Interval...
Generating docs for compound geodesic::IntervalWithStop...
Generating docs for compound geodesic::IntervalList...
Generating docs for compound geodesic::SurfacePointWithIndex...
Generating docs for compound geodesic::SortedSources...
Generating docs for compound geodesic::SimpleVector...
Generating docs for compound geodesic::MeshElementBase...
Generating docs for compound geodesic::Point3D...
Generating docs for compound geodesic::Vertex...
Generating docs for compound geodesic::Face...
Generating docs for compound geodesic::Edge...
Generating docs for compound geodesic::SurfacePoint...
Generating docs for compound geodesic::HalfEdge...
Generating docs for compound geodesic::GeodesicAlgorithmExact...
Generating docs for compound geodesic::edge_visible_from_source...
Generating docs for compound geodesic::Mesh...
Generating docs for compound geodesic::GeodesicAlgorithmGraphBase...
Generating docs for namespace soma
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory aims
Generating dependency graph for directory aims/classification
Generating dependency graph for directory aims/compression
Generating dependency graph for directory aims/connectivity
Generating dependency graph for directory aims/distancemap
Generating dependency graph for directory aims/estimation
Generating dependency graph for directory aims/ffd
Generating dependency graph for directory aims/foldgraph
Generating dependency graph for directory aims/geodesicpath
Generating dependency graph for directory aims/information
Generating dependency graph for directory aims/interpolation
Generating dependency graph for directory aims/io
Generating dependency graph for directory aims/math
Generating dependency graph for directory aims/mesh
Generating dependency graph for directory aims/moment
Generating dependency graph for directory aims/morphology
Generating dependency graph for directory aims/optimization
Generating dependency graph for directory aims/primalsketch
Generating dependency graph for directory aims/pyramid
Generating dependency graph for directory aims/registration
Generating dependency graph for directory aims/resampling
Generating dependency graph for directory aims/roi
Generating dependency graph for directory aims/scalespace
Generating dependency graph for directory aims/signalfilter
Generating dependency graph for directory aims/threshold
Generating dependency graph for directory aims/transform
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compoun/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/selection/qSelectFactory.h:70: warning: The following parameters of QSelectFactory::handleSelectionMenu(anatomist::AWindow *win, int x, int y, const Tree *specific=0) are not documented:
  parameter 'win'
  parameter 'x'
  parameter 'y'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/interface/qwSurfMatch.h:60: warning: The following parameter of QSurfMatchWin::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/texturepanel.h:75: warning: The following parameter of QTexturePanel::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
erating docs for file anatomist/winhisto/histo.h...
Generating docs for file anatomist/winhisto/histoWin.h...
Generating docs for file anatomist/winprof/profFactory.h...
Generating docs for file anatomist/winprof/profStrategy.h...
Generating docs for file anatomist/winprof/profT.h...
Generating docs for file anatomist/winprof/profWin.h...
Generating docs for file anatomist/winprof/profX.h...
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Generating docs for file anatomist/winprof/profZ.h...
Generating page documentation...
Generating docs for page objects_opengl...
Generating group documentation...
Generating class documentation...
Generating docs for compound AimsFileDialog...
Generating docs for compound AimsFileDialogExtension...
Generating docs for compound ALandmarkPicker...
Generating docs for compound APipeReader_Bridge...
Generating docs for compound AttributedChooser...
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Generating docs for nested compound AWindow3D::ObjectModifier...
Generating docs for compound ChooseReferentialWindow...
Generating docs for compound ControlledWindow...
Generating docs for compound ControlSwitch...
Generating docs for compound ControlWindow...
Generating docs for compound ErpWraper...
Generating docs for compound FixedPointOfViewWindow...
Generating docs for compound Fusion2DWindow...
Generating docs for compound Fusion3DWindow...
Generating docs for compound FusionChooser...
Generating docs for compound GLWidgetManager_Private_QObject...
Generating docs for compound Gradient...
Generating docs for compound GradientWidget...
Generating docs for compound GraphLandmarkPicker...
Generating docs for compound KeyRepetitiveEvent...
Generating docs for compound LightModelWindow...
Generating docs for compound listboxeditor...
Generating docs for compound MaterialWindow...
Generating docs for compound MenuCallback...
Generating docs for compound ObjectChooseDialog...
Generating docs for compound ObjectParamSelect...
Generating docs for compound PaintActionView...
Generating docs for compound PreferencesWindow...
Generating docs for compound QAbout...
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Generating docs for compound QAGLWidget...
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Generating docs for compound QAHistogram...
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Generating docs for compound QAOptionMenuCallback...
Generating docs for compound QAPaletteWin...
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Generating docs for compound QAProfileStrategy...
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Generating docs for compound QAWindowFactory...
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Generating docs for compound QCancelLineEdit...
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Generating docs for compound QImageLabel...
Generating docs for compound QLabelEdit...
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Generating docs for compound QObjectBrowserWidget...
Generating docs for nested compound QObjectBrowserWidget::ItemDescr...
Generating docs for compound QObjectTree...
Generating docs for compound QScopeLineEdit...
Generating docs for compound QSelAttrib...
Generating docs for compound QSelectFactory...
Generating docs for compound QSelectMenu...
Generating docs for compound QStringEdit...
Generating docs for compound QSurfMatchWin...
Generating docs for compound QSurfMatchWin_AttEdit...
Generating docs for compound QTexturePanel...
Generating docs for compound QTextureParams...
Generating docs for compound QTextureVectorEditor...
Generating docs fo/casa/host/build/include/anatomist/object/texturewin.h:62: warning: The following parameter of QTextureWin::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:114: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/aims/primalsketch/greyLevelBlob.h:115: warning: explicit link request to 'type' could not be resolved
/casa/host/build/include/anatomist/color/wRendering.h:67: warning: The following parameter of RenderingWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:227: warning: The following parameter of RoiDynSegmentActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/histoplot.h:55: warning: The following parameter of RoiHistoPlot::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/levelsetaction.h:187: warning: The following parameter of RoiLevelSetActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/roimanagementaction.h:96: warning: The following parameter of RoiManagementActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/morphomath.h:113: warning: The following parameter of RoiMorphoMathActionView::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/gradientwidget/spline.h:62: warning: argument 'ptSize' of command @param is not found in the argument list of Spline::findSegment(QSize gradSize, QPoint ptPos, int &amp;p1, int &amp;p2) const
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:23,810::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/build/include/anatomist/window3D/wTools3D.h:54: warning: The following parameter of Tools3DWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/surface/wvectorfield.h:62: warning: The following parameter of VectorFieldEditionWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/volrenderpanel.h:68: warning: The following parameter of VolRenderPanel::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cAssignReferential.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set&lt; AObject * &gt; &amp;obj, const std::set&lt; AWindow * &gt; &amp;win, int refId=-1, CommandContext *context=0, const std::string &amp;filename="", const std::string &amp;uuid="")
/casa/host/build/include/anatomist/commands/cAssignReferential.h:66: warning: The following parameters of anatomist::AssignReferentialCommand::AssignReferentialCommand(Referential *ref, const std::set&lt; AObject * &gt; &amp;obj, const std::set&lt; AWindow * &gt; &amp;win, int refId=-1, CommandContext *context=0, const std::string &amp;filename="", const std::string &amp;uuid="") are not documented:
  parameter 'context'
  parameter 'filename'
  parameter 'uuid'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
r compound QTextureWin...
Generating docs for compound QVectorCompEditor...
Generating docs for compound QWindowTree...
Generating docs for compound ReferentialWindow...
Generating docs for compound ReferentialWindow_TransCallback...
Generating docs for compound RegionsFusionWindow...
Generating docs for compound RenderingWindow...
Generating docs for compound RoiDynSegmentActionView...
Generating docs for compound RoiHistoPlot...
Generating docs for compound RoiLevelSetActionView...
Generating docs for compound RoiManagementActionView...
Generating docs for compound RoiMorphoMathActionView...
Generating docs for compound Spline...
Generating docs for compound ToolBox...
Generating docs for compound Tools3DWindow...
Generating docs for compound VectorFieldEditionWindow...
Generating docs for compound VolRenderPanel...
Generating docs for compound ZoomDialog...
Generating namespace index...
Generating docs for namespace aims
Generating docs for namespace anatomist
Generating docs for compound anatomist::AnatomistInfo...
Generating docs for compound anatomist::Anatomist...
Generating docs for compound anatomist::GlobalConfiguration...
Generating docs for compound anatomist::LocalConfiguration...
Generating docs for compound anatomist::Settings...
Generating docs for compound anatomist::Module...
Generating docs for compound anatomist::ModuleManager...
Generating docs for compound anatomist::ModuleObserver...
Generating docs for compound anatomist::ModuleInterface...
Generating docs for compound anatomist::SyntaxRepository...
Generating docs for compound anatomist::SelectBrowserControl...
Generating docs for compound anatomist::AttDescr...
Generating docs for compound anatomist::Bucket...
Generating docs for compound anatomist::ColorScalarPaletteTraits...
Generating docs for compound anatomist::ColorNoPaletteTraits...
Generating docs for compound anatomist::ColorTraits...
Generating docs for compound anatomist::APaletteExtensionAction...
Generating docs for compound anatomist::APaletteWin...
Generating docs for compound anatomist::APaletteWinFactory...
Generating docs for compound anatomist::AObjectPalette...
Generating docs for compound anatomist::PaletteList...
Generating docs for compound anatomist::APalette...
Generating docs for compound anatomist::Material...
Generating docs for compound anatomist::Light...
Generating docs for compound anatomist::ActivateActionCommand...
Generating docs for compound anatomist::AddObjectCommand...
Generating docs for compound anatomist::ApplyBuiltinReferentialCommand...
Generating docs for compound anatomist::AskTexExtremaCommand...
Generating docs for compound anatomist::AssignReferentialCommand...
Generating docs for compound anatomist::CameraCommand...
Generating docs for compound anatomist::ChangePaletteCommand...
Generating docs for compound anatomist::ControlsParamsCommand...
Generating docs for compound anatomist::ClosePipeCommand...
Generating docs for compound anatomist::CloseWindowCommand...
Generating docs for compound anatomist::CreateControlWindowCommand...
Generating docs for compound anatomist::CreateWindowCommand...
Generating docs for compound anatomist::DeleteAllCommand...
Generating docs for compound anatomist::DeleteElementCommand...
Generating docs for compound anatomist::DeleteObjectCommand...
Generating docs for compound anatomist::DuplicateObjectCommand...
Generating docs for compound anatomist::EventFilterCommand...
Generating docs for compound anatomist::ExitCommand...
Generating docs for compound anatomist::ExportTextureCommand...
Generating docs for compound anatomist::ExternalReferenceCommand...
Generating docs for compound anatomist::ExtractTextureCommand...
Generating docs for compound anatomist::Fusion2DParamsCommand...
Generating docs for compound anatomist::Fusion3DParamsCommand...
Generating docs for compound anatomist::FusionInfoCommand...
Generating docs for compound anatomist::FusionObjectsCommand...
Generating docs for compound anatomist::GenerateTextureCommand...
Generating docs for compound anatomist::GetInfoCommand...
Generating docs for compou/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
[ 86%] Generating AimsFiberOversampler help file ...
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/hierarchy/hierarchy.h:83: warning: The following parameter of anatomist::Hierarchy::findMatchingNomenclature(const AObject *obj, const AGraph **ag=0) is not documented:
  parameter 'obj'
/casa/host/build/include/anatomist/selection/selectFactory.h:134: warning: The following parameters of anatomist::SelectFactory::handleSelectionMenu(AWindow *win, int x, int y, const Tree *specific=0) are not documented:
  parameter 'win'
  parameter 'x'
  parameter 'y'
/casa/host/build/include/anatomist/observer/Observer.h:66: warning: The following parameter of anatomist::Observer::update(const Observable *observable, void *arg)=0 is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/reference/refobserver.h:70: warning: The following parameter of anatomist::ReferentialObserver::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,086::INFO::Pipeline 'morphologist.capsul.morphologist.Morphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.morphologist.Morphologist.png'.
d index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 14494/65536 hits=126641 misses=17525
finished...
/casa/host/build/include/anatomist/surface/glcomponent.h:149: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:152: warning: explicit link request to 'texnum' could not be resolved
/casa/host/build/include/anatomist/surface/glcomponent.h:310: warning: The following parameters of anatomist::GLComponent::glBuildTexImage(const ViewState &amp;state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
  parameter 'state'
  parameter 'tex'
  parameter 'dimy'
[ 86%] Built target aimsalgo-doxygen
/casa/host/build/include/anatomist/surface/planarfusion3d.h:103: warning: The following parameters of anatomist::PlanarFusion3D::glBuildTexImage(const ViewState &amp;state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
  parameter 'state'
  parameter 'tex'
  parameter 'dimy'
[ 86%] Generating AimsFileConvert help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,159::INFO::Pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.png'.
/casa/host/build/include/anatomist/surface/texture.h:91: warning: The following parameter of anatomist::ATexture::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,252::INFO::Pipeline 'morphologist.capsul.axon.normalization.Normalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalization.Normalization.png'.
nd anatomist::GraphDisplayPropertiesCommand...
Generating docs for compound anatomist::GraphParamsCommand...
Generating docs for compound anatomist::GroupObjectsCommand...
Generating docs for compound anatomist::LinkedCursorCommand...
Generating docs for compound anatomist::LinkWindowsCommand...
Generating docs for compound anatomist::LoadGraphSubObjectsCommand...
Generating docs for compound anatomist::LoadObjectCommand...
Generating docs for compound anatomist::LoadTransformationCommand...
Generating docs for compound anatomist::LoadTransformationGraphCommand...
Generating docs for compound anatomist::NewIdCommand...
Generating docs for compound anatomist::NewPaletteCommand...
Generating docs for compound anatomist::ObjectInfoCommand...
Generating docs for compound anatomist::OutputCommand...
Generating docs for compound anatomist::PopupPaletteCommand...
Generating docs for compound anatomist::ReloadObjectCommand...
Generating docs for compound anatomist::RemoveObjectCommand...
Generating docs for compound anatomist::SaveObjectCommand...
Generating docs for compound anatomist::SaveTransformationCommand...
Generating docs for compound anatomist::SaveTransformationGraphCommand...
Generating docs for compound anatomist::SelectCommand...
Generating docs for compound anatomist::SelectByHierarchyCommand...
Generating docs for compound anatomist::ServerCommand...
Generating docs for compound anatomist::SetControlCommand...
Generating docs for compound anatomist::SetMaterialCommand...
Generating docs for compound anatomist::SetObjectPaletteCommand...
Generating docs for compound anatomist::ShowObjectCommand...
Generating docs for compound anatomist::SliceParamsCommand...
Generating docs for compound anatomist::TexturingParamsCommand...
Generating docs for compound anatomist::WindowBlockCommand...
Generating docs for compound anatomist::WindowConfigCommand...
Generating docs for compound anatomist::Hierarchy...
Generating docs for compound anatomist::QSelectWidget...
Generating docs for compound anatomist::WSelectChooser...
Generating docs for compound anatomist::SelectFactory...
Generating docs for nested compound anatomist::SelectFactory::HColor...
Generating docs for compound anatomist::Selector...
Generating docs for compound anatomist::LowestLevelSelector...
Generating docs for compound anatomist::PostSelector...
Generating docs for compound anatomist::Observer...
Generating docs for compound anatomist::Observable...
Generating docs for compound anatomist::ObservableCreatedNotifier...
Generating docs for compound anatomist::Transformation...
Generating docs for compound anatomist::Referential...
Generating docs for compound anatomist::Geometry...
Generating docs for compound anatomist::Referentiable...
Generating docs for compound anatomist::ReferentialObserver...
Generating docs for compound anatomist::ReferencePixmap...
Generating docs for compound anatomist::TransformationObserver...
Generating docs for compound anatomist::ATransformSet...
Generating docs for compound anatomist::RefWindow...
Generating docs for compound anatomist::CutMesh...
Generating docs for compound anatomist::Fusion2DMesh...
Generating docs for compound anatomist::FusionTexSurfMethod...
Generating docs for compound anatomist::GLComponent...
Generating docs for nested compound anatomist::GLComponent::TexExtrema...
Generating docs for nested compound anatomist::GLComponent::TexInfo...
Generating docs for compound anatomist::AGLObject...
Generating docs for compound anatomist::AMTexture...
Generating docs for compound anatomist::PlanarFusion3D...
Generating docs for compound anatomist::ASurface...
Generating docs for compound anatomist::TesselatedMesh...
Generating docs for compound anatomist::ATexSurfaceIterator...
Generating docs for compound anatomist::const_ATexSurfaceIterator...
Generating docs for compound anatomist::ATexSurface...
Generating docs for compound anatomist::TextObject...
Generating docs for compound anatomist::ATexture...
Generating docs for compound anatomist::TransformedObject...
Generating docs for compound anatomist::Shader...
/casa/host/build/include/anatomist/surface/shownormalsgui.h:72: warning: The following parameter of anatomist::NormalsSettingsPanel::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/surface/shownormalsgui.h:62: warning: The following parameter of anatomist::NormalsSettingsPanel::NormalsObserver::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
[ 86%] Generating AimsFileInfo help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,314::INFO::Pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabelling.SulciLabelling.png'.
/casa/host/build/include/anatomist/object/oReader.h:86: warning: The following parameter of anatomist::ObjectReader::registerLoader(const std::string &amp;extension, LoadFunctionClass *newFunc) is not documented:
  parameter 'extension'
Process2 execution, a: 0.000000, b: blop
/casa/host/build/include/anatomist/object/Object.h:368: warning: Unsupported xml/html tag &lt;T&gt; found
/casa/host/build/include/anatomist/object/Object.h:400: warning: The following parameter of anatomist::AObject::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/object/sliceable.h:80: warning: The following parameters of anatomist::Sliceable::glBuildTexImage(const ViewState &amp;state, unsigned tex, int dimx=-1, int dimy=-1, bool useTexScale=true) const are not documented:
  parameter 'state'
  parameter 'tex'
  parameter 'dimy'
/casa/host/build/include/anatomist/control/controlMenuHandler.h:57: warning: The following parameter of anatomist::AControlMenuHandler::AControlMenuHandler(QMenuBar *menubar, QObject *receiver) is not documented:
  parameter 'menubar'
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,423::INFO::Pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.png'.
Generating docs for nested compound anatomist::Shader::ColoringModel_...
Generating docs for nested compound anatomist::Shader::InterpolationModel_...
Generating docs for nested compound anatomist::Shader::LightingModel_...
Generating docs for nested compound anatomist::Shader::MaterialModel_...
Generating docs for compound anatomist::ANormalsMesh...
Generating docs for compound anatomist::NormalsFusionMethod...
Generating docs for compound anatomist::NormalsSettingsPanel...
Generating docs for nested compound anatomist::NormalsSettingsPanel::NormalsObserver...
Generating docs for compound anatomist::VectorField...
Generating docs for compound anatomist::AGraphIterator...
Generating docs for compound anatomist::const_AGraphIterator...
Generating docs for compound anatomist::PythonAObject...
Generating docs for compound anatomist::AGraphObject...
Generating docs for compound anatomist::AGraph...
Generating docs for compound anatomist::ObjectActions...
Generating docs for compound anatomist::ClippedObject...
Generating docs for compound anatomist::AObjectLoadEvent...
Generating docs for compound anatomist::ObjectReaderNotifier...
Generating docs for compound anatomist::MObjectIO...
Generating docs for compound anatomist::ObjectMenuCallback...
Generating docs for compound anatomist::ObjectMenuCallbackFunc...
Generating docs for compound anatomist::ObjectMenu...
Generating docs for compound anatomist::ObjectMenuRegistrerClass...
Generating docs for compound anatomist::ObjectMenuRegistrerFuncClass...
Generating docs for compound anatomist::ObjectUtils...
Generating docs for compound anatomist::OptionMatcher...
Generating docs for compound anatomist::ObjectReader...
Generating docs for nested compound anatomist::ObjectReader::LoadFunctionClass...
Generating docs for compound anatomist::AImage...
Generating docs for compound anatomist::AObject...
Generating docs for compound anatomist::ObjectConverter...
Generating docs for compound anatomist::SelfSliceable...
Generating docs for compound anatomist::Sliceable...
Generating docs for compound anatomist::SliceableObject...
Generating docs for compound anatomist::ColoredPixmapCache...
Generating docs for compound anatomist::GraphParams...
Generating docs for compound anatomist::AWinConfigIO...
Generating docs for compound anatomist::AControlMenuHandler...
Generating docs for compound anatomist::AbstractMenuHandler...
Generating docs for compound anatomist::ControlConfiguration...
Generating docs for compound anatomist::WhatsNew...
Generating docs for compound anatomist::QAObjectDrag...
Generating docs for compound anatomist::Action...
Generating docs for compound anatomist::ActionDictionary...
Generating docs for nested compound anatomist::ActionDictionary::ActionCreatorBase...
Generating docs for nested compound anatomist::ActionDictionary::ActionCreatorFunc...
Generating docs for compound anatomist::ControlDictionary...
Generating docs for nested compound anatomist::ControlDictionary::ControlCreatorBase...
Generating docs for nested compound anatomist::ControlDictionary::ControlCreatorFunc...
Generating docs for compound anatomist::ControlGroupDictionary...
Generating docs for compound anatomist::IconDictionary...
Generating docs for compound anatomist::ActionPool...
Generating docs for compound anatomist::ControlMapEntry...
Generating docs for compound anatomist::LessControlMap...
Generating docs for compound anatomist::ControlManager...
Generating docs for compound anatomist::Control...
Generating docs for nested compound anatomist::Control::DropActionLink...
Generating docs for nested compound anatomist::Control::DropActionLinkOf...
Generating docs for nested compound anatomist::Control::EnterLeaveActionLink...
Generating docs for nested compound anatomist::Control::EnterLeaveActionLinkOf...
Generating docs for nested compound anatomist::Control::FocusActionLink...
Generating docs for nested compound anatomist::Control::FocusActionLinkOf...
Generating docs for nested compound anatomist::Control::KeyActionLink...
Generating docs for nested compound anatomist::Control::KeyAction/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,445::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,445::INFO::Summary: '14' files written for module 'capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,460::INFO::Pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.png'.
/casa/host/build/include/anatomist/window/Window.h:223: warning: The following parameter of anatomist::AWindow::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
writing output... [ 73%] pyanatomist_direct
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:24,546::INFO::Pipeline 'morphologist.capsul.fslnormalization.FSLNormalization' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.fslnormalization.FSLNormalization.png'.
LinkOf...
Generating docs for nested compound anatomist::Control::KeyMapKey...
Generating docs for nested compound anatomist::Control::LessKeyMap...
Generating docs for nested compound anatomist::Control::LessMouseMap...
Generating docs for nested compound anatomist::Control::MouseActionLink...
Generating docs for nested compound anatomist::Control::MouseActionLinkOf...
Generating docs for nested compound anatomist::Control::MouseButtonMapKey...
Generating docs for nested compound anatomist::Control::MoveOrDragActionLink...
Generating docs for nested compound anatomist::Control::MoveOrDragActionLinkOf...
Generating docs for nested compound anatomist::Control::PaintActionLink...
Generating docs for nested compound anatomist::Control::PaintActionLinkOf...
Generating docs for nested compound anatomist::Control::PanActionLink...
Generating docs for nested compound anatomist::Control::PanActionLinkOf...
Generating docs for nested compound anatomist::Control::PinchActionLink...
Generating docs for nested compound anatomist::Control::PinchActionLinkOf...
Generating docs for nested compound anatomist::Control::ResizeActionLink...
Generating docs for nested compound anatomist::Control::ResizeActionLinkOf...
Generating docs for nested compound anatomist::Control::SelectionChangedActionLink...
Generating docs for nested compound anatomist::Control::SelectionChangedActionLinkOf...
Generating docs for nested compound anatomist::Control::ShowHideActionLink...
Generating docs for nested compound anatomist::Control::ShowHideActionLinkOf...
Generating docs for nested compound anatomist::Control::SwipeActionLink...
Generating docs for nested compound anatomist::Control::SwipeActionLinkOf...
Generating docs for nested compound anatomist::Control::TapActionLink...
Generating docs for nested compound anatomist::Control::TapActionLinkOf...
Generating docs for nested compound anatomist::Control::TapAndHoldActionLink...
Generating docs for nested compound anatomist::Control::TapAndHoldActionLinkOf...
Generating docs for nested compound anatomist::Control::WheelActionLink...
Generating docs for nested compound anatomist::Control::WheelActionLinkOf...
Generating docs for compound anatomist::KeyAndMouseLongEvent...
Generating docs for compound anatomist::MouseLongEvent...
Generating docs for compound anatomist::LongActions...
Generating docs for compound anatomist::ControlSwitchObserver...
Generating docs for compound anatomist::View...
Generating docs for compound anatomist::QAWindowDrag...
Generating docs for compound anatomist::GLCaps...
Generating docs for compound anatomist::GLWidgetManager...
Generating docs for compound anatomist::ViewState...
Generating docs for compound anatomist::SliceViewState...
Generating docs for compound anatomist::AWindowCreator...
Generating docs for compound anatomist::AWindowFactory...
Generating docs for compound anatomist::AWindowCreatorFunc...
Generating docs for compound anatomist::AWindow...
Generating docs for compound anatomist::AnnotationAction...
Generating docs for compound anatomist::BoxViewSlice...
Generating docs for compound anatomist::ConnectivityMatrixAction...
Generating docs for compound anatomist::ConnectivityMatrixControl...
Generating docs for compound anatomist::OrientationAnnotation...
Generating docs for compound anatomist::Cursor...
Generating docs for compound anatomist::Control3D...
Generating docs for compound anatomist::Select3DControl...
Generating docs for compound anatomist::FlightControl...
Generating docs for compound anatomist::ObliqueControl...
Generating docs for compound anatomist::TransformControl...
Generating docs for compound anatomist::CutControl...
Generating docs for compound anatomist::WindowActions...
Generating docs for compound anatomist::LinkAction...
Generating docs for compound anatomist::MenuAction...
Generating docs for compound anatomist::SelectAction...
Generating docs for compound anatomist::Zoom3DAction...
Generating docs for compound anatomist::Translate3DAction...
Generating docs for compound anatomist::Sync3DAction...
Generating docs for compound anatowriting output... [ 75%] pyanatomist_examples
/casa/host/build/include/anatomist/object/Object.h:368: warning: Unsupported xml/html tag &lt;T&gt; found
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
warning: Inheritance graph for 'anatomist::RegularCommand' not generated, too many nodes (56), threshold is 50. Consider increasing DOT_GRAPH_MAX_NODES.
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:151: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:155: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:153: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:60: warning: Found unknown command '\URL'
/casa/host/build/include/anatomist/processor/Registry.h:80: warning: Found unknown command '\Ref'
/casa/host/build/include/anatomist/processor/Registry.h:85: warning: The following parameters of anatomist::Registry::add(const std::string &amp;command, Command::Reader function, const carto::SyntaxSet &amp;syntax) are not documented:
  parameter 'function'
  parameter 'syntax'
/casa/host/build/include/anatomist/processor/Reader.h:64: warning: The following parameter of anatomist::CommandReader::CommandReader(const std::string &amp;filename, carto::MutexRcPtr&lt; CommandContext &gt; &amp;context) is not documented:
  parameter 'context'
mist::MovieAction...
Generating docs for compound anatomist::SliceAction...
Generating docs for compound anatomist::DragObjectAction...
Generating docs for compound anatomist::SortMeshesPolygonsAction...
Generating docs for compound anatomist::ObjectStatAction...
Generating docs for compound anatomist::LabelEditAction...
Generating docs for compound anatomist::Trackball...
Generating docs for compound anatomist::ContinuousTrackball...
Generating docs for compound anatomist::KeyFlightAction...
Generating docs for compound anatomist::TrackCutAction...
Generating docs for compound anatomist::CutSliceAction...
Generating docs for compound anatomist::TrackOblique...
Generating docs for compound anatomist::TrackObliqueSlice...
Generating docs for compound anatomist::Transformer...
Generating docs for compound anatomist::TranslaterAction...
Generating docs for compound anatomist::PlanarTransformer...
Generating docs for compound anatomist::ResizerAction...
Generating docs for compound anatomist::GLObjectList...
Generating docs for compound anatomist::GLObjectVector...
Generating docs for compound anatomist::GLMObject...
Generating docs for compound anatomist::ObjectVectorIterator...
Generating docs for compound anatomist::const_ObjectVectorIterator...
Generating docs for compound anatomist::ObjectVector...
Generating docs for compound anatomist::BaseIterator...
Generating docs for compound anatomist::AIterator...
Generating docs for compound anatomist::MObject...
Generating docs for compound anatomist::Fusion2D...
Generating docs for compound anatomist::Fusion3D...
Generating docs for compound anatomist::ObjectListIterator...
Generating docs for compound anatomist::const_ObjectListIterator...
Generating docs for compound anatomist::ObjectList...
Generating docs for compound anatomist::Slice...
Generating docs for compound anatomist::AVolumeBase...
Generating docs for compound anatomist::AVolume...
Generating docs for compound anatomist::AVolumeView...
Generating docs for compound anatomist::CommandContext...
Generating docs for compound anatomist::ErrorMessage...
Generating docs for compound anatomist::OutputEvent...
Generating docs for compound anatomist::OutputEventFilter...
Generating docs for compound anatomist::EventHandler...
Generating docs for compound anatomist::APipeReader...
Generating docs for compound anatomist::Unserializer...
Generating docs for compound anatomist::CommandServer...
Generating docs for compound anatomist::Command...
Generating docs for compound anatomist::RegularCommand...
Generating docs for compound anatomist::SerializingCommand...
Generating docs for compound anatomist::WaitCommand...
Generating docs for compound anatomist::Processor...
Generating docs for nested compound anatomist::Processor::Memo...
Generating docs for compound anatomist::Registry...
Generating docs for compound anatomist::CommandReader...
Generating docs for compound anatomist::CommandWriter...
Generating docs for compound anatomist::Serializer...
Generating docs for compound anatomist::Fusion2dMethod...
Generating docs for compound anatomist::Fusion3dMethod...
Generating docs for compound anatomist::PlanarFusion3dMethod...
Generating docs for compound anatomist::FusionTextureMethod...
Generating docs for compound anatomist::FusionMultiTextureMethod...
Generating docs for compound anatomist::FusionCutMeshMethod...
Generating docs for compound anatomist::Fusion2DMeshMethod...
Generating docs for compound anatomist::FusionSliceMethod...
Generating docs for compound anatomist::FusionRGBAVolumeMethod...
Generating docs for compound anatomist::FusionClipMethod...
Generating docs for compound anatomist::FusionTesselationMethod...
Generating docs for compound anatomist::ConnectivityMatrixFusionMethod...
Generating docs for compound anatomist::VectorFieldFusionMethod...
Generating docs for compound anatomist::FusionMethod...
Generating docs for compound anatomist::FusionFactory...
Generating docs for compound anatomist::StdModule...
Generating docs for compound anatomist::AConnectivityMatrix...
Generating docs for compound anatomist[ 86%] Built target highres-cortex-doxygen
/casa/host/build/include/anatomist/constrainteditor/wConstraintEditor.h:61: warning: The following parameter of anatomist::ConstraintEditorWindow::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
[ 86%] Built target sigraph-doxygen
[ 86%] Built target brainrat-private-doxygen
/casa/host/build/include/anatomist/action/levelsetaction.h:64: warning: The following parameter of anatomist::RoiLevelSetActionSharedData::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/action/paintaction.h:124: warning: The following parameters of anatomist::PaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm)=0 are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:177: warning: The following parameters of anatomist::PointPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:200: warning: The following parameters of anatomist::SquarePaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:224: warning: The following parameters of anatomist::DiskPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:259: warning: The following parameters of anatomist::BallPaintStrategy::paint(AWindow3D *win, Transformation *transf, const Point3df &amp;point, const AObject *originalLabel, AObject *finalLabel, float brushSize, bool lineMode, carto::VolumeRef&lt; AObject * &gt; &amp;volumeOfLabels, const Point3df &amp;vlOffset, aims::BucketMap&lt; Void &gt;::Bucket &amp;deltaModifications, std::list&lt; std::pair&lt; Point3d, ChangesItem &gt; &gt; &amp;changes, const Point3df &amp;voxelSize, bool line, bool replace, bool mm) are not documented:
  parameter 'win'
  parameter 'transf'
  parameter 'point'
  parameter 'originalLabel'
  parameter 'finalLabel'
  parameter 'brushSize'
  parameter 'lineMode'
  parameter 'volumeOfLabels'
  parameter 'deltaModifications'
  parameter 'changes'
  parameter 'voxelSize'
  parameter 'line'
  parameter 'replace'
  parameter 'mm'
/casa/host/build/include/anatomist/action/paintaction.h:296: warning: The following parameter of anatomist::PaintActionSharedData::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
[ 86%] Generating AimsFlip help file ...
[ 86%] Built target primatologist-gpl-doxygen
/casa/host/build/include/anatomist/action/roimanagementaction.h:199: warning: The following parameter of anatomist::RoiManagementActionSharedData::update(const Observable *observable, void *arg) is not documented:
  parameter 'arg'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
[ 86%] Generating AimsGraphComplete help file ...
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'ref' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'obj' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'refId' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:58: warning: argument 'unser' of command @param is not found in the argument list of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cGetConnThres.h:68: warning: The following parameters of anatomist::GetConnThresholdCommand::GetConnThresholdCommand(AObject *image, AWindow *win, const std::string &amp;requestid, CommandContext *context=0) are not documented:
  parameter 'image'
  parameter 'requestid'
  parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'ref' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'obj' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'refId' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:56: warning: argument 'unser' of command @param is not found in the argument list of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0)
/casa/host/build/include/anatomist/commands/cSetConnThres.h:66: warning: The following parameters of anatomist::SetConnThresholdCommand::SetConnThresholdCommand(AObject *image, AWindow *win, bool assignLowThreshold, float lowThres, bool assignHighThreshold, float highThres, CommandContext *context=0) are not documented:
  parameter 'image'
  parameter 'assignLowThreshold'
  parameter 'lowThres'
  parameter 'assignHighThreshold'
  parameter 'highThres'
  parameter 'context'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:65: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:67: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/processor/Command.h:69: warning: Found unknown command '\tt'
/casa/host/build/include/anatomist/action/dynsegmentaction.h:65: warning: The following parameter of anatomist::RoiDynSegmentAction::update(const anatomist::Observable *observable, void *arg) is not documented:
  parameter 'arg'
::ASparseMatrix...
Generating docs for compound anatomist::GLItem...
Generating docs for compound anatomist::Primitive...
Generating docs for compound anatomist::GLList...
Generating docs for compound anatomist::GLTexture...
Generating docs for compound anatomist::GLItemList...
Generating docs for compound anatomist::GLNoExecItemList...
Generating docs for compound anatomist::ConstraintEditorWindow...
Generating docs for compound anatomist::NodeSelectionAction...
Generating docs for compound anatomist::NodeSelectionControl...
Generating docs for compound anatomist::HierarchyEditor...
Generating docs for compound anatomist::ErpReader...
Generating docs for compound anatomist::AInterpolerMethod...
Generating docs for compound anatomist::AInterpoler...
Generating docs for compound anatomist::ALandmarkFactory...
Generating docs for compound anatomist::PlaneFusionMethod...
Generating docs for compound anatomist::CylinderFusionMethod...
Generating docs for compound anatomist::ASurfMatchMethod...
Generating docs for compound anatomist::ASurfMatcher...
Generating docs for compound anatomist::AnaSurfMatch...
Generating docs for compound anatomist::SurfpaintModule...
Generating docs for compound anatomist::SurfpaintTools...
Generating docs for compound anatomist::SurfpaintToolsAction...
Generating docs for compound anatomist::SurfpaintToolsControl...
Generating docs for compound anatomist::VolRenderFusionMethod...
Generating docs for compound anatomist::VolRenderShaderFusionMethod...
Generating docs for compound anatomist::VolRenderModule...
Generating docs for compound anatomist::VolRender...
Generating docs for compound anatomist::VolRenderShader...
Generating docs for compound anatomist::ProfileModule...
Generating docs for compound anatomist::RoiLevelSetActionSharedData...
Generating docs for compound anatomist::RoiLevelSetAction...
Generating docs for compound anatomist::RoiLabelNamingAction...
Generating docs for compound anatomist::ChangesItem...
Generating docs for compound anatomist::ChangedBucketsItem...
Generating docs for compound anatomist::RoiChangeProcessor...
Generating docs for compound anatomist::PaintStrategy...
Generating docs for compound anatomist::PointPaintStrategy...
Generating docs for compound anatomist::SquarePaintStrategy...
Generating docs for compound anatomist::DiskPaintStrategy...
Generating docs for compound anatomist::BallPaintStrategy...
Generating docs for compound anatomist::PaintActionSharedData...
Generating docs for compound anatomist::PaintAction...
Generating docs for compound anatomist::RoiBlobSegmentationAction...
Generating docs for compound anatomist::PaintControl...
Generating docs for compound anatomist::RoiLevelSetControl...
Generating docs for compound anatomist::RoiLabelNamingControl...
Generating docs for compound anatomist::RoiManagementActionSharedData...
Generating docs for compound anatomist::RoiManagementAction...
Generating docs for compound anatomist::RoiManagementControl...
Generating docs for compound anatomist::RoiBaseModule...
Generating docs for compound anatomist::CreateGraphCommand...
Generating docs for compound anatomist::GetConnThresholdCommand...
Generating docs for compound anatomist::SetConnThresholdCommand...
Generating docs for compound anatomist::AddNodeCommand...
Generating docs for compound anatomist::PaintParamsCommand...
Generating docs for compound anatomist::RoiDynSegmentAction...
Generating docs for compound anatomist::RoiMorphoMathAction...
Generating docs for compound anatomist::RoiDynSegmentControl...
Generating docs for compound anatomist::RoiAlgoModule...
Generating docs for compound anatomist::HistogramModule...
Generating docs for namespace anatomist::internal
Generating docs for compound anatomist::internal::ColorTraitsType...
Generating docs for compound anatomist::internal::PaletteWinExtensionActions...
Generating docs for compound anatomist::internal::VectorFieldCoordSpinBox...
Generating docs for compound anatomist::internal::AGraphicsView...
Generating docs for compound anatomist::internal::AGraphicsScene...
Generating docs for compound[ 86%] Generating AimsGraphConvert help file ...
writing output... [ 78%] pyanatomist_headless
/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
/casa/host/build/include/anatomist/application/anatomist_doc.h:41: warning: image file anatomist.png is not found in IMAGE_PATH: assuming external image.
writing output... [ 80%] pyanatomist_howto
writing output... [ 82%] pyanatomist_notebook
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:25,113::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:25,113::INFO::Found '38' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:25,114::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
writing output... [ 85%] pyanatomist_pyaims_tutorial
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:25,120::INFO::Pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.png'.
writing output... [ 87%] pyanatomist_socket
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:25,156::INFO::Pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:25,328::INFO::Pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.brainorientation.BrainOrientation.png'.
writing output... [ 90%] pyanatomist_threaded
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:25,409::INFO::Pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline' representation has been written at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/schema/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.png'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:25,409::INFO::Summary: '14' files written for module 'capsul'.
 anatomist::internal::TransformerActionData...
Generating docs for compound anatomist::internal::NoDragSlider...
Generating docs for compound anatomist::internal::CommandReader_Bridge...
Generating docs for namespace carto
Generating docs for compound carto::GLWidget...
Generating docs for namespace Vr
Generating docs for compound Vr::Creator...
Generating docs for compound Vr::CubeZBuffer...
Generating docs for compound Vr::MIPShader...
Generating docs for compound Vr::MPVRShader...
Generating docs for compound Vr::RfmtShader...
Generating docs for compound Vr::Shader...
Generating docs for compound Vr::ShaderFactory...
Generating docs for compound Vr::Slicing...
Generating docs for compound Vr::SumShader...
Generating docs for compound Vr::Vector3d...
Generating docs for compound Vr::VRShader...
Generating docs for compound Vr::VrSingleton...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory anatomist/action
Generating dependency graph for directory anatomist
Generating dependency graph for directory anatomist/application
Generating dependency graph for directory anatomist/browser
Generating dependency graph for directory anatomist/bucket
Generating dependency graph for directory anatomist/color
Generating dependency graph for directory anatomist/commands
Generating dependency graph for directory anatomist/constrainteditor
Generating dependency graph for directory anatomist/control
Generating dependency graph for directory anatomist/controler
Generating dependency graph for directory anatomist/erpio
Generating dependency graph for directory anatomist/graph
Generating dependency graph for directory anatomist/hierarchy
Generating dependency graph for directory anatomist/interface
Generating dependency graph for directory anatomist/interpoler
Generating dependency graph for directory anatomist/landmark
Generating dependency graph for directory anatomist/mobject
Generating dependency graph for directory anatomist/module
Generating dependency graph for directory anatomist/object
Generating dependency graph for directory anatomist/processor
Generating dependency graph for directory anatomist/reference
Generating dependency graph for directory anatomist/selection
Generating dependency graph for directory anatomist/sparsematrix
Generating dependency graph for directory anatomist/stdmod
Generating dependency graph for directory anatomist/surface
Generating dependency graph for directory anatomist/surfmatcher
Generating dependency graph for directory anatomist/volume
Generating dependency graph for directory anatomist/window
Generating dependency graph for directory anatomist/window3D
Generating dependency graph for directory anatomist/winhisto
Generating dependency graph for directory anatomist/winprof
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
Running dot...
lookup cache used 17500/65536 hits=98897 misses=21427
finished...
[ 86%] Built target anatomist-doxygen
[ 86%] Built target constellation-doxygen
[ 86%] Generating AimsGraphExtractTransformation help file ...
writing output... [ 15%] pyaims_aimsalgo
[ 86%] Generating AimsGraphMerge help file ...
[ 86%] Generating AimsInvertTransformation help file ...
writing output... [ 92%] pyanatomist_tutorial
writing output... [ 95%] pyanatomist_tutorial_nb
[ 86%] Built target cortical_surface-doxygen
[ 93%] Generating AimsMassCenter help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:25,992::INFO::Found '14' pipeline(s) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:25,993::INFO::Found '38' process(es) in 'morphologist.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:25,993::INFO::Processing pipeline 'morphologist.capsul.axon.axonmorphologist.AxonMorphologist'...
[ 93%] Generating AimsMerge2Rgb help file ...
[ 93%] Create "share/doc/5.1"
[ 93%] Built target anatomist-free-devdoc
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[ 93%] Create "share/doc/5.1"
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[ 93%] Create "share/doc/5.1"
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[ 93%] Create "share/doc/5.1"
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reading sources... [ 83%] python_bv_processing_gui
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[ 93%] Built target sulci-nonfree-doc
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:26,678::ERROR::Traceback (most recent call last):
  File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_training.py", line 8, in &lt;module&gt;
    from ..method.svm import SVMPatternClassification
  File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in &lt;module&gt;
    from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)

/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:26,678::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_training
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:26,679::ERROR::Traceback (most recent call last):
  File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_labeling.py", line 7, in &lt;module&gt;
    from ..method.svm import SVMPatternClassification
  File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in &lt;module&gt;
    from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)

/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:26,679::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_labeling
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_view.py::2025-11-19 04:28:26,680::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
[ 93%] Built target brainrat-private-doc
[ 93%] Generating AimsMeshCut help file ...
[ 93%] Built target primatologist-gpl-doc
[ 93%] Generating AimsMeshes2Graph help file ...
writing output... [ 97%] pyanatomist_wip
writing output... [100%] sg_execution_times

generating indices... genindex py-modindex done
copying linked files... 
copying notebooks ... 
highlighting module code... [  9%] _thread
highlighting module code... [ 18%] anatomist
highlighting module code... [ 27%] anatomist.base
highlighting module code... [ 36%] anatomist.cpp
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highlighting module code... [100%] functools
writing output... [ 23%] pyaims_aimsalgo_examples
writing output... [ 30%] pyaims_algo

writing additional pages... search done
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copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... [ 93%] Generating AimsMeshGenerate help file ...
done

Sphinx-Gallery successfully executed 0 out of 0 files subselected by:

    gallery_conf["filename_pattern"] = '/(anagraphannotate)|(aimsvolumetest)|(anaevensimplerviewer)|(control)|(ellipsoid)|(fusion3D)|(graph)|(graph_building)|(meshtest)|(nomenclatureselection)|(selection)|(volumetest)|(customopenglobject)\\.py'
    gallery_conf["ignore_pattern"]   = '__init__\\.py'

after excluding 13 files that had previously been run (based on MD5).

embedding documentation hyperlinks...
embedding documentation hyperlinks for auto_examples... [  4%] anagraphannotate.html
embedding documentation hyperlinks for auto_examples... [  8%] sphere.html
embedding documentation hyperlinks for auto_examples... [ 12%] aimsvolumetest.html
embedding documentation hyperlinks for auto_examples... [ 16%] ellipsoid.html
embedding documentation hyperlinks for auto_examples... [ 20%] texturedrawing.html
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embedding documentation hyperlinks for auto_examples... [ 28%] index.html
embedding documentation hyperlinks for auto_examples... [ 32%] volumetest.html
embedding documentation hyperlinks for auto_examples... [ 36%] meshtest.html
embedding documentation hyperlinks for auto_examples... [ 40%] selection.html
embedding documentation hyperlinks for auto_examples... [ 44%] graph_building.html
embedding documentation hyperlinks for auto_examples... [ 48%] activateaction.html
embedding documentation hyperlinks for auto_examples... [ 52%] anaevensimplerviewer.html
embedding documentation hyperlinks for auto_examples... [ 56%] fusion.html
embedding documentation hyperlinks for auto_examples... [ 60%] events.html
embedding documentation hyperlinks for auto_examples... [ 64%] volumeMeasures.html
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embedding documentation hyperlinks for auto_examples... [ 72%] sg_execution_times.html
embedding documentation hyperlinks for auto_examples... [ 76%] addMenuEntry.html
embedding documentation hyperlinks for auto_examples... [ 80%] customopenglobject.html
embedding documentation hyperlinks for auto_examples... [ 84%] anatomistapiTests.html
embedding documentation hyperlinks for auto_examples... [ 88%] bvProcessSocket.html
embedding documentation hyperlinks for auto_examples... [ 92%] nomenclatureselection.html
embedding documentation hyperlinks for auto_examples... [ 96%] graph.html
embedding documentation hyperlinks for auto_examples... [100%] fusion3D.html

build succeeded, 23 warnings.

The HTML pages are in ../../../share/doc/pyanatomist-5.1/sphinx.
PyAnatomist Module present
PythonLauncher::runModules()
[ 93%] Built target constellation-nonfree-doc
[ 93%] Generating AimsMeshTransform help file ...
[ 93%] Built target cortical_surface-nonfree-doc
writing output... [ 38%] pyaims_api_aims
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:27,735::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:27,745::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
[ 93%] Generating AimsOverVolume help file ...
[ 93%] Create "share/doc/5.1"
[ 93%] Built target bioprocessing-devdoc
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:27,919::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:27,927::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:27,965::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,014::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,025::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,046::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,059::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
[ 93%] Generating AimsRemoveNaN help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,068::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,076::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
[ 93%] Built target bioprocessing-doc
reading sources... [100%] python_bv_tools
[ 93%] Generating AimsRoiFeatures help file ...
[ 93%] Built target anatomist-gpl-sphinx

/casa/host/build/python/brainvisa/data/neuroDiskItems.py:docstring of brainvisa.data.neuroDiskItems.DiskItem.setResolutionLevel:7: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/data/readdiskitem.py:docstring of brainvisa.data.readdiskitem.ReadDiskItem.diskItemDistance:3: ERROR: Unexpected indentation.
/casa/host/build/python/brainvisa/data/databaseCheck.py:docstring of brainvisa.data.databaseCheck.T1MriConverter:5: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/data/databaseCheck.py:docstring of brainvisa.data.databaseCheck.T1MriConverter:10: ERROR: Unexpected indentation.
WARNING: autodoc: failed to import module 'ftpDirectory' from module 'brainvisa.data'; the following exception was raised:
No module named 'cStringIO'
WARNING: autodoc: failed to import module 'virtualDirectory' from module 'brainvisa.data'; the following exception was raised:
No module named 'cStringIO'
/casa/host/build/python/brainvisa/data/qt4gui/history.py:docstring of brainvisa.data.qt4gui.history.DataHistoryWindow.show_log:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/data/qt4gui/readdiskitemGUI.py:docstring of brainvisa.data.qt4gui.readdiskitemGUI.ComboBoxAction.triggered:1: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo:13: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.converter:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.distance:7: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.distance:17: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.exactDestTypeConverter:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.exists:6: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DiskItemConversionInfo.exists:17: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DistributedProcess:1: WARNING: duplicate object description of brainvisa.processes.DistributedProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DistributedProcess.initialization:1: WARNING: duplicate object description of brainvisa.processes.DistributedProcess.initialization, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.DistributedProcess.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.DistributedProcess.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.UserInterruption:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.UserInterruption, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.UserInterruptionStep:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.UserInterruptionStep, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.ask:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.ask, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.checkInterruption:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.checkInterruption, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.dialog:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.dialog, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.error:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.error, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.getConverter:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.getConverter, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.getProgressInfo:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.getProgressInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.log:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.log, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.progress:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.progress, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.pythonSystem:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.pythonSystem, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.runInteractiveProcess:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.runInteractiveProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.runProcess:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.runProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.showException:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.showException, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.showProgress:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.showProgress, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.system:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.system, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.temporary:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.temporary, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.warning:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.warning, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionContext.write:1: WARNING: duplicate object description of brainvisa.processes.ExecutionContext.write, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addDoubleLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addDoubleLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addExecutionDependencies:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addExecutionDependencies, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.addLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.addLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.allParameterFiles:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.allParameterFiles, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.child:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.child, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.children:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.children, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.childrenNames:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.childrenNames, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.gui:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.gui, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.hasChildren:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.hasChildren, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.isSelected:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.isSelected, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.name:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parameterized:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parameterized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parent_node:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parent_node, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parent_pipeline:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parent_pipeline, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.parseParameterString:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.parseParameterString, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.removeChild:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.removeChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.removeDoubleLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.removeDoubleLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.removeLink:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.removeLink, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.run:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.run, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.setNodeHidden:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.setNodeHidden, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ExecutionNode.setSelected:1: WARNING: duplicate object description of brainvisa.processes.ExecutionNode.setSelected, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.IterationProcess:1: WARNING: duplicate object description of brainvisa.processes.IterationProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.IterationProcess.initialization:1: WARNING: duplicate object description of brainvisa.processes.IterationProcess.initialization, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.IterationProcess.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.IterationProcess.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ListOfIterationProcess:1: WARNING: duplicate object description of brainvisa.processes.ListOfIterationProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ParallelExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.ParallelExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized:1: WARNING: duplicate object description of brainvisa.processes.Parameterized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized:10: WARNING: duplicate object description of brainvisa.processes.Parameterized.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized:14: WARNING: duplicate object description of brainvisa.processes.Parameterized.signatureChangeNotifier, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.linkParameters:25: ERROR: Unexpected indentation.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.linkParameters:28: WARNING: Block quote ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.linkParameters:30: WARNING: Definition list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.linkParameters:34: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.setEnable:3: ERROR: Unexpected indentation.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.setEnable:1: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.setEnable:3: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Parameterized.setEnable:3: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:1: WARNING: duplicate object description of brainvisa.processes.Process, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:8: WARNING: duplicate object description of brainvisa.processes.Process.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:12: WARNING: duplicate object description of brainvisa.processes.Process.category, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:16: WARNING: duplicate object description of brainvisa.processes.Process.userLevel, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process:21: WARNING: duplicate object description of brainvisa.processes.Process.showMaximized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.id:1: WARNING: duplicate object description of brainvisa.processes.Process.id, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.validation:1: WARNING: duplicate object description of brainvisa.processes.Process.validation, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.execution:1: WARNING: duplicate object description of brainvisa.processes.Process.execution, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.executionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.executionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.setExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.setExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.getAllParameters:1: WARNING: duplicate object description of brainvisa.processes.Process.getAllParameters, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.allProcesses:1: WARNING: duplicate object description of brainvisa.processes.Process.allProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.Process.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourceFile:1: WARNING: duplicate object description of brainvisa.processes.Process.sourceFile, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourcePath:1: WARNING: duplicate object description of brainvisa.processes.Process.sourcePath, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.inlineGUI:1: WARNING: duplicate object description of brainvisa.processes.Process.inlineGUI, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process._iterate:1: WARNING: duplicate object description of brainvisa.processes.Process._iterate, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process._copy:1: WARNING: duplicate object description of brainvisa.processes.Process._copy, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,498::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline'...
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.allProcesses:1: WARNING: duplicate object description of brainvisa.processes.Process.allProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.execution:1: WARNING: duplicate object description of brainvisa.processes.Process.execution, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.executionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.executionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.getAllParameters:1: WARNING: duplicate object description of brainvisa.processes.Process.getAllParameters, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.id:1: WARNING: duplicate object description of brainvisa.processes.Process.id, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.inlineGUI:1: WARNING: duplicate object description of brainvisa.processes.Process.inlineGUI, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.Process.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.setExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.Process.setExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourceFile:1: WARNING: duplicate object description of brainvisa.processes.Process.sourceFile, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.sourcePath:1: WARNING: duplicate object description of brainvisa.processes.Process.sourcePath, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.Process.validation:1: WARNING: duplicate object description of brainvisa.processes.Process.validation, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.addExecutionDependencies:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.addExecutionDependencies, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.child:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.child, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.children:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.children, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.childrenNames:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.childrenNames, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.gui:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.gui, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessExecutionNode.processReloaded:1: WARNING: duplicate object description of brainvisa.processes.ProcessExecutionNode.processReloaded, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:1: WARNING: duplicate object description of brainvisa.processes.ProcessInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:3: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.id, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:7: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:11: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:15: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.userLevel, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:19: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.category, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:23: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.showMaximized, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:27: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.fileName, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:31: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.roles, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:35: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.valid, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:39: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.procdoc, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:43: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.toolbox, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo:47: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.module, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessInfo.html:1: WARNING: duplicate object description of brainvisa.processes.ProcessInfo.html, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.accept:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.accept:14: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.processes:5: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.processes:8: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessSet.source:2: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Branch:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Branch, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Branch.setVisible:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Branch.setVisible, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Branch.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Branch.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Leaf:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Leaf, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Leaf.setVisible:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Leaf.setVisible, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.Leaf.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.Leaf.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.addDir:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.addDir, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.setEditable:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.setEditable, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.setName:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.setName, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.setVisible:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.setVisible, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTree.updateName:1: WARNING: duplicate object description of brainvisa.processes.ProcessTree.updateName, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:11: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:15: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.userProcessTreeMinfFile, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees:20: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.selectedTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.add:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.add, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.load:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.load, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.save:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.save, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.ProcessTrees.update:1: WARNING: duplicate object description of brainvisa.processes.ProcessTrees.update, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode.addExecutionDependencies:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode.addExecutionDependencies, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionExecutionNode.childSelectionChange:1: WARNING: duplicate object description of brainvisa.processes.SelectionExecutionNode.childSelectionChange, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionProcess:1: WARNING: duplicate object description of brainvisa.processes.SelectionProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionProcess.initialization:1: WARNING: duplicate object description of brainvisa.processes.SelectionProcess.initialization, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SelectionProcess.pipelineStructure:1: WARNING: duplicate object description of brainvisa.processes.SelectionProcess.pipelineStructure, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SerialExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.SerialExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SerialExecutionNode.addChild:1: WARNING: duplicate object description of brainvisa.processes.SerialExecutionNode.addChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.SerialExecutionNode.removeChild:1: WARNING: duplicate object description of brainvisa.processes.SerialExecutionNode.removeChild, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.addProcessInfo:1: WARNING: duplicate object description of brainvisa.processes.addProcessInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.allProcessesInfo:1: WARNING: duplicate object description of brainvisa.processes.allProcessesInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.allProcessesTree:1: WARNING: duplicate object description of brainvisa.processes.allProcessesTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.cleanupProcesses:1: WARNING: duplicate object description of brainvisa.processes.cleanupProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.convertSpecialLinks:8: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.defaultContext:1: WARNING: duplicate object description of brainvisa.processes.defaultContext, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getConversionInfo:6: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getConverter:1: WARNING: duplicate object description of brainvisa.processes.getConverter, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getConvertersFrom:1: WARNING: duplicate object description of brainvisa.processes.getConvertersFrom, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getConvertersTo:1: WARNING: duplicate object description of brainvisa.processes.getConvertersTo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getDataEditor:1: WARNING: duplicate object description of brainvisa.processes.getDataEditor, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getDefaultListOfDataEditor:4: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getDefaultListOfDataEditor:9: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getDefaultListOfProcesses:13: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getDefaultListOfViewer:4: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getDefaultListOfViewer:9: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getImporter:1: WARNING: duplicate object description of brainvisa.processes.getImporter, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getProcess:1: WARNING: duplicate object description of brainvisa.processes.getProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getProcessFromExecutionNode:1: WARNING: duplicate object description of brainvisa.processes.getProcessFromExecutionNode, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getProcessInfo:1: WARNING: duplicate object description of brainvisa.processes.getProcessInfo, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getProcessInstance:1: WARNING: duplicate object description of brainvisa.processes.getProcessInstance, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getProcessInstanceFromProcessEvent:1: WARNING: duplicate object description of brainvisa.processes.getProcessInstanceFromProcessEvent, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getProcessesBySourceDist:11: WARNING: Field list ends without a blank line; unexpected unindent.
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.getViewer:1: WARNING: duplicate object description of brainvisa.processes.getViewer, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.initializeProcesses:1: WARNING: duplicate object description of brainvisa.processes.initializeProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.mainThread:1: WARNING: duplicate object description of brainvisa.processes.mainThread, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:1: WARNING: duplicate object description of brainvisa.processes.readProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:13: WARNING: duplicate object description of brainvisa.processes.NewProcess, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:19: WARNING: duplicate object description of brainvisa.processes.NewProcess.name, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:23: WARNING: duplicate object description of brainvisa.processes.NewProcess.category, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:27: WARNING: duplicate object description of brainvisa.processes.NewProcess.dataDirectory, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:35: WARNING: duplicate object description of brainvisa.processes.NewProcess.processReloadNotifier, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:39: WARNING: duplicate object description of brainvisa.processes.NewProcess.signature, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:43: WARNING: duplicate object description of brainvisa.processes.NewProcess.userLevel, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:47: WARNING: duplicate object description of brainvisa.processes.NewProcess.roles, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcess:51: WARNING: duplicate object description of brainvisa.processes.NewProcess.execution, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.readProcesses:1: WARNING: duplicate object description of brainvisa.processes.readProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.runViewer:1: WARNING: duplicate object description of brainvisa.processes.runViewer, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.updateProcesses:1: WARNING: duplicate object description of brainvisa.processes.updateProcesses, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processes.py:docstring of brainvisa.processes.updatedMainProcessTree:1: WARNING: duplicate object description of brainvisa.processes.updatedMainProcessTree, other instance in python_bv_processing, use :noindex: for one of them
/casa/host/build/python/brainvisa/processing/qt4gui/neuroProcessesGUI.py:docstring of brainvisa.processing.qt4gui.neuroProcessesGUI.RemoteContextGUI:6: WARNING: Literal block expected; none found.
/casa/host/build/python/brainvisa/processing/qt4gui/neuroProcessesGUI.py:docstring of brainvisa.processing.qt4gui.neuroProcessesGUI.RemoteContextGUI:9: ERROR: Unexpected indentation.
/casa/host/build/python/brainvisa/processing/qt4gui/neuroProcessesGUI.py:docstring of brainvisa.processing.qt4gui.neuroProcessesGUI.RemoteContextGUI:10: WARNING: Line block ends without a blank line.
/casa/host/build/python/brainvisa/processing/qt4gui/neuroProcessesGUI.py:docstring of brainvisa.processing.qt4gui.neuroProcessesGUI.RemoteContextGUI:12: WARNING: Line block ends without a blank line.
/casa/host/build/python/brainvisa/processing/qt4gui/neuroProcessesGUI.py:docstring of brainvisa.processing.qt4gui.neuroProcessesGUI.RemoteContextGUI:16: WARNING: Line block ends without a blank line.
/casa/host/build/python/brainvisa/tools/spm_utils.py:docstring of brainvisa.tools.spm_utils.merge_mat_files:7: WARNING: Inline emphasis start-string without end-string.
/casa/host/build/python/brainvisa/tools/displayTitledGrid.py:docstring of brainvisa.tools.displayTitledGrid.displayTitledGrid:5: ERROR: Unexpected indentation.
/casa/host/build/python/brainvisa/tools/displayTitledGrid.py:docstring of brainvisa.tools.displayTitledGrid.displayTitledGrid:6: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... /casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,503::INFO::Processing pipeline 'morphologist.capsul.axon.brainorientation.BrainOrientation'...
[ 93%] Generating AimsSetMinf help file ...
[ 93%] Create "share/doc/5.1"
[ 93%] Built target anatomist-gpl-devdoc
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,661::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,668::INFO::Processing pipeline 'morphologist.capsul.axon.normalization.Normalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,705::INFO::Processing pipeline 'morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped'...
done
checking consistency... /casa/host/src/axon/5.1/sphinxdoc/dev_doc/python_bv_configuration.rst: WARNING: document isn't included in any toctree
/casa/host/src/axon/5.1/sphinxdoc/dev_doc/python_bv_tools.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [  8%] capsul
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,755::INFO::Processing pipeline 'morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,765::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabelling.SulciLabelling'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,786::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,799::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLNormalization'...
[ 93%] Generating AimsSplitRgb help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,812::INFO::Processing pipeline 'morphologist.capsul.fslnormalization.FSLnormalizationPipeline'...
[ 93%] Built target anatomist-gpl-doc
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,823::INFO::Processing pipeline 'morphologist.capsul.morphologist.Morphologist'...
writing output... [ 16%] developer_manual
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,835::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,857::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,874::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,874::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,874::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,875::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,876::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,877::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,878::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,878::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,879::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,879::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
[ 93%] Generating AimsSubVolume help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,880::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,881::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,881::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,885::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,886::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,887::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,887::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,888::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,889::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,889::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,890::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,890::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,891::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,892::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,893::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,893::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,894::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,894::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,895::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,896::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,897::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,897::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,898::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,899::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,900::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,900::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,901::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,905::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,906::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,906::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,907::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,908::INFO::process: '38' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,908::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:28,908::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul.
writing output... [ 25%] index
writing output... [ 33%] python
writing output... [ 41%] python_bv_configuration
[ 93%] Generating AimsSumSparseMatrix help file ...
writing output... [ 50%] python_bv_data
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,561::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMNormalization'...
[ 93%] Generating AimsTCat help file ...
generating CAPSUL processes docs...
['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist', '--schema']
loading pickled environment... /casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,578::INFO::Processing pipeline 'morphologist.capsul.spmnormalization.SPMnormalizationPipeline'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,588::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,588::INFO::pipeline: '14' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,588::INFO::Processing pipeline 'morphologist.capsul.axon.acpcorientation.AcpcOrientation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,589::INFO::Processing pipeline 'morphologist.capsul.axon.aimsconverter.AimsConverter'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,590::INFO::Processing pipeline 'morphologist.capsul.axon.baladinnormalizationtoaims.BaladinNormalizationToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,591::INFO::Processing pipeline 'morphologist.capsul.axon.brainsegmentation.BrainSegmentation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,591::INFO::Processing pipeline 'morphologist.capsul.axon.fslnormalizationtoaims.FSLnormalizationToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,592::INFO::Processing pipeline 'morphologist.capsul.axon.greywhiteclassificationhemi.GreyWhiteClassificationHemi'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,593::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitemesh.GreyWhiteMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,593::INFO::Processing pipeline 'morphologist.capsul.axon.greywhitetopology.GreyWhiteTopology'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,594::INFO::Processing pipeline 'morphologist.capsul.axon.histoanalysis.HistoAnalysis'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,594::INFO::Processing pipeline 'morphologist.capsul.axon.importt1mri.ImportT1MRI'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,595::INFO::Processing pipeline 'morphologist.capsul.axon.morphologistprocess.morphologistProcess'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,599::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_aimsmiregister.normalization_aimsmiregister'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,599::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_baladin.Normalization_Baladin'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,600::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_fsl_reinit.Normalization_FSL_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,601::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_spm_reinit.Normalization_SPM_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,601::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm12_reinit.normalization_t1_spm12_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,602::INFO::Processing pipeline 'morphologist.capsul.axon.normalization_t1_spm8_reinit.normalization_t1_spm8_reinit'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,603::INFO::Processing pipeline 'morphologist.capsul.axon.pialmesh.PialMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,603::INFO::Processing pipeline 'morphologist.capsul.axon.reorientanatomy.ReorientAnatomy'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,604::INFO::Processing pipeline 'morphologist.capsul.axon.scalpmesh.ScalpMesh'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,604::INFO::Processing pipeline 'morphologist.capsul.axon.skullstripping.skullstripping'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,605::INFO::Processing pipeline 'morphologist.capsul.axon.splitbrain.SplitBrain'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,606::INFO::Processing pipeline 'morphologist.capsul.axon.spmsn3dtoaims.SPMsn3dToAims'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,606::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraph.SulciGraph'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,607::INFO::Processing pipeline 'morphologist.capsul.axon.sulcigraphmorphometrybysubject.sulcigraphmorphometrybysubject'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,608::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingann.SulciLabellingANN'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,608::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamglobal.SulciLabellingSPAMGlobal'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,609::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspamlocal.SulciLabellingSPAMLocal'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,610::INFO::Processing pipeline 'morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,611::INFO::Processing pipeline 'morphologist.capsul.axon.sulciskeleton.SulciSkeleton'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,611::INFO::Processing pipeline 'morphologist.capsul.axon.t1biascorrection.T1BiasCorrection'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,612::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformation.TalairachTransformation'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,613::INFO::Processing pipeline 'morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,614::INFO::Processing pipeline 'morphologist.capsul.import_t1_mri.ImportT1Mri'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,614::INFO::Processing pipeline 'morphologist.capsul.morphologist_simple.MorphologistSimple'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,618::INFO::Processing pipeline 'morphologist.capsul.morphologist_viewer.MorphologistView'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,619::INFO::Processing pipeline 'morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,619::INFO::Processing pipeline 'morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,620::INFO::Writing index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,620::INFO::process: '38' files written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,620::INFO::Writing module 'capsul' index at location '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:29,621::INFO::Index: an index has been written for module 'capsul' at location /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul.
[ 93%] Generating AimsTex2Graph help file ...
writing output... [ 58%] python_bv_data_gui
done
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.1/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.1/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/soma-workflow-3.2/sphinx/objects.inv...
loading intersphinx inventory from doc/morphologist-ui-5.1/objects.inv...
WARNING: failed to reach any of the inventories with the following issues:
intersphinx inventory 'doc/morphologist-ui-5.1/objects.inv' not fetchable due to &lt;class 'FileNotFoundError'&gt;: [Errno 2] No such file or directory: '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/doc/morphologist-ui-5.1/objects.inv'
writing output... [ 66%] python_bv_processing
[ 93%] Generating AimsTex2Vol help file ...
[ 93%] Generating AimsThreshold help file ...
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, sulpated.rst
building [mo]: targets for 0 po files that are out of date
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building [html]: targets for 57 source files that are out of date
updating environment: 0 added, 55 changed, 0 removed
reading sources... [  1%] process_docs/morphologist/capsul/index
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reading sources... [  5%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist
generating CAPSUL processes docs...
['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'morphologist.capsul', '-o', '/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist', '--schema']
loading pickled environment... reading sources... [  7%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline
reading sources... [  9%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation
[ 93%] Generating AimsSelectLabel help file ...
reading sources... [ 10%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline
reading sources... [ 12%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization
reading sources... [ 14%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped
[ 93%] Generating AimsVectorFieldToMesh help file ...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,433::ERROR::Traceback (most recent call last):
  File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_training.py", line 8, in &lt;module&gt;
    from ..method.svm import SVMPatternClassification
  File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in &lt;module&gt;
    from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)

/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,433::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_training
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,434::ERROR::Traceback (most recent call last):
  File "/casa/host/src/capsul/5.1/capsul/qt_apps/utils/find_pipelines.py", line 138, in find_pipeline_and_process
    __import__(sub_sub_module_name)
  File "/casa/host/build/python/deepsulci/pattern_classification/capsul/svm_labeling.py", line 7, in &lt;module&gt;
    from ..method.svm import SVMPatternClassification
  File "/casa/host/build/python/deepsulci/pattern_classification/method/svm.py", line 11, in &lt;module&gt;
    from pcl import registration as reg
ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)

/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,434::ERROR::Can't load module deepsulci.pattern_classification.capsul.svm_labeling
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,434::INFO::Found '0' pipeline(s) in 'deepsulci.pattern_classification.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,434::INFO::Found '4' process(es) in 'deepsulci.pattern_classification.capsul'.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,434::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,435::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,436::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,437::INFO::Processing pipeline 'deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,437::INFO::Writing index at location '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification/process/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,437::INFO::process: '4' files written for module 'pattern_classification' at location /casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification/process.
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,438::INFO::Writing module 'pattern_classification' index at location '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification/index.rst'...
/casa/host/src/capsul/5.1/capsul/sphinxext/capsul_pipeline_rst.py::2025-11-19 04:28:30,438::INFO::Index: an index has been written for module 'pattern_classification' at location /casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci/pattern_classification.
reading sources... [ 16%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline
done
reading sources... [ 18%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabelling.SulciLabelling
loading intersphinx inventory from /casa/host/build/share/doc/soma-base-5.1/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyaims-5.1/sphinx/objects.inv...
loading intersphinx inventory from /casa/host/build/share/doc/pyanatomist-5.1/sphinx/objects.inv...
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reading sources... [ 20%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.sulcilabellingspam.SulciLabellingSPAM
reading sources... [ 21%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLNormalization
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reading sources... [ 25%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.morphologist.Morphologist
reading sources... [ 27%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMNormalization
[ 93%] Generating AimsVolumeExtract help file ...
reading sources... [ 29%] process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline
[autosummary] generating autosummary for: index.rst, process_docs/morphologist/capsul/index.rst, process_docs/morphologist/capsul/pipeline/index.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.axonmorphologist.AxonMorphologist.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.baladinnormalizationpipeline.BaladinNormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.brainorientation.BrainOrientation.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalization.Normalization.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.normalizationskullstripped.NormalizationSkullStripped.rst, process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst, ..., process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulcilabellingspammarkov.SulciLabellingSPAMMarkov.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.sulciskeleton.SulciSkeleton.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.t1biascorrection.T1BiasCorrection.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformation.TalairachTransformation.rst, process_docs/morphologist/capsul/process/morphologist.capsul.axon.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst, process_docs/morphologist/capsul/process/morphologist.capsul.import_t1_mri.ImportT1Mri.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_simple.MorphologistSimple.rst, process_docs/morphologist/capsul/process/morphologist.capsul.morphologist_viewer.MorphologistView.rst, process_docs/morphologist/capsul/process/morphologist.capsul.sulci_manip.graph_pointcloud_label.GraphPointCloudLabel.rst, process_docs/morphologist/capsul/process/morphologist.capsul.talairachtransformationfromnormalization.TalairachTransformationFromNormalization.rst
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 56 source files that are out of date
updating environment: 0 added, 55 changed, 0 removed
reading sources... [  1%] process_docs/morphologist/capsul/index
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['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.sulci_labeling.capsul', '-o', '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci', '--schema']
['/usr/bin/python3', '-m', 'capsul.sphinxext.capsul_pipeline_rst', '-i', 'deepsulci.pattern_classification.capsul', '-o', '/casa/host/src/morphologist/morpho-deepsulci/5.1/sphinx/process_docs/deepsulci', '--schema']
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/user_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
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[autosummary] generating autosummary for: api.rst, index.rst, process_docs/deepsulci/pattern_classification/index.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_labeling.PatternDeepLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.resnet_training.PatternDeepTraining.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_labeling.PatternSnipeLabeling.rst, process_docs/deepsulci/pattern_classification/process/deepsulci.pattern_classification.capsul.snipe_training.PatternSnipeTraining.rst, process_docs/deepsulci/pattern_classification/process/index.rst, process_docs/deepsulci/sulci_labeling/index.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.error_computation.ErrorComputation.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.labeling.SulciDeepLabeling.rst, process_docs/deepsulci/sulci_labeling/process/deepsulci.sulci_labeling.capsul.training.SulciDeepTraining.rst, process_docs/deepsulci/sulci_labeling/process/index.rst
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst
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/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.fslnormalization.FSLnormalizationPipeline.rst:66: WARNING: duplicate label morphologist.capsul.axon.fslnormalizationpipeline.fslnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.fslnormalizationpipeline.FSLnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:30: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_inputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
/casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.spmnormalization.SPMnormalizationPipeline.rst:70: WARNING: duplicate label morphologist.capsul.axon.spmnormalizationpipeline.spmnormalizationpipeline_outputs, other instance in /casa/host/src/morphologist/morphologist-gpl/5.1/sphinx/dev_doc/process_docs/morphologist/capsul/pipeline/morphologist.capsul.axon.spmnormalizationpipeline.SPMnormalizationPipeline.rst
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build succeeded, 17 warnings.

The HTML pages are in ../../share/doc/morphologist-5.1/user_doc.
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build succeeded, 8 warnings.

The HTML pages are in ../../share/doc/morphologist-5.1/dev_doc.
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Failed to import deepsulci.pattern_classification.method.svm.
Possible hints:
* ImportError: cannot import name 'registration' from 'pcl' (/usr/lib/python3/dist-packages/pcl/__init__.py)
* AttributeError: module 'deepsulci.pattern_classification.method' has no attribute 'svm'
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/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.setRef:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.ref:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.ref:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.ref:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.ref:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.ref:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.doit:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.ref:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_DOUBLE.setRef:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_FLOAT.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_HSV.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_POINT3DF.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGB.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.doit:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.ref:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_RGBA.setRef:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.doit:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.ref:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.doit:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.ref:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_S32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.doit:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.ref:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U16.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.doit:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.ref:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U32.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.doit:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.ref:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample:1: WARNING: more than one target found for cross-reference 'AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Transformation3d': soma.aims.soma.Transformation3d, soma.aims.Transformation3d
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.resample_inv_to_vox:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.Resampler_U8.setRef:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_DOUBLE.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_FLOAT.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_HSV.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_POINT3DF.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGB': soma.aims.Volume_RGB, soma.aims.soma.aims.Volume_RGB
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGB.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_RGBA': soma.aims.Volume_RGBA, soma.aims.soma.aims.Volume_RGBA
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_RGBA.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_S32': soma.aims.Volume_S32, soma.aims.soma.aims.Volume_S32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_S32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_U16': soma.aims.Volume_U16, soma.aims.soma.aims.Volume_U16
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U16.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_U32': soma.aims.Volume_U32, soma.aims.soma.aims.Volume_U32
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U32.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_U8': soma.aims.Volume_U8, soma.aims.soma.aims.Volume_U8
/casa/host/build/python/soma/aimsalgo/__init__.py:docstring of soma.aimsalgo.SplineResampler_U8.reset:1: WARNING: more than one target found for cross-reference 'Volume_DOUBLE': soma.aims.Volume_DOUBLE, soma.aims.soma.aims.Volume_DOUBLE
/casa/host/build/python/soma/aims/lazy_read_data.py:docstring of soma.aims.lazy_read_data.LazyReadData:1: WARNING: more than one target found for cross-reference 'AllocatorContext': soma.aims.carto.AllocatorContext, soma.aims.carto.carto.AllocatorContext
/casa/host/build/python/soma/aimsalgo/lazy_resample_volume.py:docstring of soma.aimsalgo.lazy_resample_volume.LazyResampleVolume:1: WARNING: more than one target found for cross-reference 'aims.AffineTransformation3d': soma.aims.AffineTransformation3d, soma.aims.aims.AffineTransformation3d
/casa/host/build/python/soma/aimsalgo/sulci/graph_pointcloud.py:docstring of soma.aimsalgo.sulci.graph_pointcloud.build_split_graph:1: WARNING: more than one target found for cross-reference 'aims.Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
/casa/host/build/python/soma/aimsalgo/sulci/graph_pointcloud.py:docstring of soma.aimsalgo.sulci.graph_pointcloud.build_split_graph:1: WARNING: more than one target found for cross-reference 'aims.Volume_S16': soma.aims.Volume_S16, soma.aims.soma.aims.Volume_S16
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build succeeded, 437 warnings.

The HTML pages are in ../../../../share/doc/pyaims-5.1/sphinx.
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/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.attributes_to_path:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.attributes_to_path, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.complete_parameters:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.complete_parameters, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.get_attribute_values:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.get_attribute_values, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.get_completion_engine:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.get_completion_engine, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.get_path_completion_engine:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.get_path_completion_engine, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.install_auto_completion:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.install_auto_completion, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.remove_auto_completion:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.remove_auto_completion, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/completion_engine.py:docstring of capsul.attributes.completion_engine.ProcessCompletionEngine.set_parameters:1: WARNING: duplicate object description of capsul.attributes.completion_engine.ProcessCompletionEngine.set_parameters, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/attributes/fom_completion_engine.py:docstring of capsul.attributes.fom_completion_engine.FomProcessCompletionEngine.create_attributes_with_fom:1: WARNING: duplicate object description of capsul.attributes.fom_completion_engine.FomProcessCompletionEngine.create_attributes_with_fom, other instance in api/attributes, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.Node.connect:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.Node.connect, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.Node.get_plug_value:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.Node.get_plug_value, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.Node.get_trait:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.Node.get_trait, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.Node.set_callback_on_plug:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.Node.set_callback_on_plug, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.Node.set_plug_value:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.Node.set_plug_value, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.check_requirements:6: ERROR: Unknown directive type "see".

.. see:: :meth:`capsul.process.process.check_requirements`
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.get_plug_value:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.get_plug_value, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.get_trait:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.get_trait, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.set_callback_on_plug:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.set_callback_on_plug, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_nodes.py:docstring of capsul.pipeline.pipeline_nodes.ProcessNode.set_plug_value:1: WARNING: duplicate object description of capsul.pipeline.pipeline_nodes.ProcessNode.set_plug_value, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/pipeline_tools.py:docstring of capsul.pipeline.pipeline_tools.write_fake_pipeline:8: ERROR: Unknown interpreted text role "warning".
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.Graph.add_link:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.Graph.add_link, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.Graph.add_node:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.Graph.add_node, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.Graph.find_node:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.Graph.find_node, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.Graph.topological_sort:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.Graph.topological_sort, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.add_link_from:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.add_link_from, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.add_link_to:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.add_link_to, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.remove_link_from:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.remove_link_from, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/pipeline/topological_sort.py:docstring of capsul.pipeline.topological_sort.GraphNode.remove_link_to:1: WARNING: duplicate object description of capsul.pipeline.topological_sort.GraphNode.remove_link_to, other instance in api/pipeline, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/process/process.py:docstring of capsul.process.process.NipypeProcess:32: WARNING: Bullet list ends without a blank line; unexpected unindent.
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.add_embedded_subpipeline:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.add_embedded_subpipeline, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.auto_dot_node_positions:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.auto_dot_node_positions, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.colored_parameters:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.colored_parameters, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.is_logical_view:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.is_logical_view, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.link_right_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.link_right_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked_ctrl:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_clicked_ctrl, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_right_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.node_right_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onLoadSubPipelineClicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onLoadSubPipelineClicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onOpenProcessController:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.onOpenProcessController, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_right_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.plug_right_clicked, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.reset_initial_nodes_positions:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.reset_initial_nodes_positions, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.save_dot_image_ui:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.save_dot_image_ui, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.scene:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.scene, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_logical_view:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_logical_view, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_pipeline:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.set_pipeline, other instance in api/qt_gui, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/qt_gui/widgets/pipeline_developer_view.py:docstring of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.subpipeline_clicked:1: WARNING: duplicate object description of capsul.qt_gui.widgets.pipeline_developer_view.PipelineDeveloperView.subpipeline_clicked, other instance in api/qt_gui, use :noindex: for one of them
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/casa/host/src/capsul/5.1/capsul/study_config/study_config.py:docstring of capsul.study_config.study_config.StudyConfig.set_study_configuration:1: WARNING: duplicate object description of capsul.study_config.study_config.StudyConfig.set_study_configuration, other instance in api/study_config, use :noindex: for one of them
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/casa/host/src/capsul/5.1/capsul/study_config/config_modules/somaworkflow_config.py:docstring of capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.disconnect_resource:1: WARNING: duplicate object description of capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.disconnect_resource, other instance in api/study_config, use :noindex: for one of them
/casa/host/src/capsul/5.1/capsul/study_config/config_modules/somaworkflow_config.py:docstring of capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.get_resource_id:1: WARNING: duplicate object description of capsul.study_config.config_modules.somaworkflow_config.SomaWorkflowConfig.get_resource_id, other instance in api/study_config, use :noindex: for one of them
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OK          step doc: /casa/host/build, started: 2025/11/19 04:28, stopped: 2025/11/19 04:30
All went good.

Finished: SUCCESS